RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 MLLT1Q03111 559 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-207ENST00000544052 HFE2Q6ZVN8 426 aa5.8□□□□□ -1.48
SCFD1-207ENST00000544052 SVOPQ8N4V2 548 aa5.8□□□□□ -1.48
SCFD1-207ENST00000544052 CEP120Q8N960 986 aa5.8□□□□□ -1.48
SCFD1-207ENST00000544052 ATXN7L1Q9ULK2 861 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-207ENST00000544052 AKAP2Q9Y2D5 859 aa5.8□□□□□ -1.48
SCFD1-207ENST00000544052 KIF4AO95239 1232 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 GDF11O95390 407 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 SLURP2P0DP57 97 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 FGFR3P22607 806 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 GRIA4P48058 902 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 PLAURQ03405 335 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 ZNF654Q8IZM8 581 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 OXCT2Q9BYC2 517 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-207ENST00000544052 TANGO6Q9C0B7 1094 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 DZANK1Q9NVP4 752 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 KBTBD4Q9NVX7 518 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 PPP4R2Q9NY27 417 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 TRAK1Q9UPV9 953 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 INPP5FQ9Y2H2 1132 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 MAP3K6O95382 1288 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 DNAJA1P31689 397 aaKnown RBP5.79□□□□□ -1.48
SCFD1-207ENST00000544052 MAP3K10Q02779 954 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 HYAL2Q12891 473 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 SF3A1Q15459 793 aaKnown RBP5.79□□□□□ -1.48
SCFD1-207ENST00000544052 ERMP1Q7Z2K6 904 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 CCNJLQ8IV13 435 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 PRKAG2Q9UGJ0 569 aa5.79□□□□□ -1.48
SCFD1-207ENST00000544052 TMEM238LA0A1B0GVL6 79 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 NFKBIEO00221 500 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 CCDC85BQ15834 202 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-207ENST00000544052 SPRED3Q2MJR0 410 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 PRPF40BQ6NWY9 871 aaKnown RBP5.78□□□□□ -1.48
SCFD1-207ENST00000544052 DTHD1Q6ZMT9 781 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 C2CD2LO14523 706 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 ATP11AP98196 1134 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 TBC1D8BQ0IIM8 1120 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 TPTE2Q6XPS3 522 aa5.78□□□□□ -1.48
SCFD1-207ENST00000544052 LOC102724428A0A0B4J2F2 783 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 MINDY4BA8MYZ0 360 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 SIK1P57059 783 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 MAP3K11Q16584 847 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 WHAMMQ8TF30 809 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 UBXN4Q92575 508 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 GMCL1Q96IK5 515 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 SPACA7Q96KW9 195 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 RASSF4Q9H2L5 321 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 PRR12Q9ULL5 1215 aa5.77□□□□□ -1.49
SCFD1-207ENST00000544052 ARHGEF15O94989 841 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 NRLP54845 237 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 PCBP4P57723 403 aaKnown RBP5.76□□□□□ -1.49
SCFD1-207ENST00000544052 SUZ12Q15022 739 aaKnown RBP5.76□□□□□ -1.49
SCFD1-207ENST00000544052 FAM182BQ5T319 152 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 SYT9Q86SS6 491 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 SLC43A3Q8NBI5 491 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 TRPM4Q8TD43 1214 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 ASAP3Q8TDY4 903 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 DHX38Q92620 1227 aaKnown RBP5.76□□□□□ -1.49
SCFD1-207ENST00000544052 NOC4LQ9BVI4 516 aaKnown RBP5.76□□□□□ -1.49
SCFD1-207ENST00000544052 EFCC1Q9HA90 598 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 HOXD8P13378 290 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-207ENST00000544052 GPLD1P80108 840 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 PAK2Q13177 524 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 GNL2Q13823 731 aaKnown RBP5.76□□□□□ -1.49
SCFD1-207ENST00000544052 ADAMTSL4Q6UY14 1074 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 NXPE3Q969Y0 559 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 DNAJC2Q99543 621 aaKnown RBP5.76□□□□□ -1.49
SCFD1-207ENST00000544052 PHF24Q9UPV7 400 aa5.76□□□□□ -1.49
SCFD1-207ENST00000544052 CELA3AP09093 270 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 TRERF1Q96PN7 1200 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 UBE2OQ9C0C9 1292 aaKnown RBP5.75□□□□□ -1.49
SCFD1-207ENST00000544052 DNAJB12Q9NXW2 375 aaKnown RBP5.75□□□□□ -1.49
SCFD1-207ENST00000544052 TLR6Q9Y2C9 796 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 A0A096LPE4 126 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 A0A1W2PPZ6 126 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 ADAMTS2O95450 1211 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 GBP2P32456 591 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-207ENST00000544052 GTF2F1P35269 517 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCFD1-207ENST00000544052 NEUROD1Q13562 356 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 GMLQ99445 158 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 POP1Q99575 1024 aaKnown RBP5.75□□□□□ -1.49
SCFD1-207ENST00000544052 PBX4Q9BYU1 374 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 ADAMTS1Q9UHI8 967 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 PPM1HQ9ULR3 514 aa5.75□□□□□ -1.49
SCFD1-207ENST00000544052 PDE2AO00408 941 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-207ENST00000544052 XRCC5P13010 732 aaKnown RBP5.74□□□□□ -1.49
SCFD1-207ENST00000544052 ATP2B1P20020 1258 aa5.74□□□□□ -1.49
SCFD1-207ENST00000544052 ITPKAP23677 461 aa5.74□□□□□ -1.49
SCFD1-207ENST00000544052 GJA8P48165 433 aa5.74□□□□□ -1.49
SCFD1-207ENST00000544052 ZNF157P51786 506 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-207ENST00000544052 ARID5AQ03989 594 aa5.74□□□□□ -1.49
SCFD1-207ENST00000544052 SRSF11Q05519 484 aaKnown RBP5.74□□□□□ -1.49
SCFD1-207ENST00000544052 FAAP100Q0VG06 881 aa5.74□□□□□ -1.49
SCFD1-207ENST00000544052 TMEM102Q8N9M5 508 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-207ENST00000544052 SPON2Q9BUD6 331 aa5.74□□□□□ -1.49
SCFD1-207ENST00000544052 RSRP1Q9BUV0 290 aa5.74□□□□□ -1.49
SCFD1-207ENST00000544052 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-207ENST00000544052 MUC3BQ9H195 1237 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms