RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 SASH1O94885 1247 aa14.74□□□□□ -0.05
AP000439.1-201ENST00000544004 ATP2B4P23634 1241 aa14.74□□□□□ -0.05
AP000439.1-201ENST00000544004 TRIM28Q13263 835 aaKnown RBP14.74□□□□□ -0.05
AP000439.1-201ENST00000544004 CD99L2Q8TCZ2 262 aa14.74□□□□□ -0.05
AP000439.1-201ENST00000544004 LAMB1P07942 1786 aa14.74□□□□□ -0.05
AP000439.1-201ENST00000544004 SZT2Q5T011 3432 aa14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 IGF2BP3O00425 579 aaKnown RBP eCLIP14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 CCDC152Q4G0S7 254 aa14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 DACT2Q5SW24 774 aa14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 APOBEC3FQ8IUX4 373 aaKnown RBP14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 ZBTB38Q8NAP3 1195 aaPredicted RBP14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 FBXW7Q969H0 707 aa14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 SLC10A4Q96EP9 437 aa14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 CCDC85AQ96PX6 553 aaPredicted RBP14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 TMEM106CQ9BVX2 250 aa14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 EFCC1Q9HA90 598 aa14.73□□□□□ -0.05
AP000439.1-201ENST00000544004 WTIPA6NIX2 430 aaPredicted RBP14.72□□□□□ -0.05
AP000439.1-201ENST00000544004 HDGFL1Q5TGJ6 251 aa14.72□□□□□ -0.05
AP000439.1-201ENST00000544004 MYO3BQ8WXR4 1341 aa14.71□□□□□ -0.05
AP000439.1-201ENST00000544004 ZBTB48P10074 688 aaPredicted RBP14.71□□□□□ -0.05
AP000439.1-201ENST00000544004 HSP90B1P14625 803 aaKnown RBP14.71□□□□□ -0.05
AP000439.1-201ENST00000544004 CRHR2Q13324 411 aa14.71□□□□□ -0.05
AP000439.1-201ENST00000544004 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
AP000439.1-201ENST00000544004 WNK4Q96J92 1243 aa14.71□□□□□ -0.05
AP000439.1-201ENST00000544004 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
AP000439.1-201ENST00000544004 MED23Q9ULK4 1368 aa14.71□□□□□ -0.06
AP000439.1-201ENST00000544004 PDE8AO60658 829 aa14.7□□□□□ -0.06
AP000439.1-201ENST00000544004 CAP1Q01518 475 aa14.7□□□□□ -0.06
AP000439.1-201ENST00000544004 STRIP1Q5VSL9 837 aa14.7□□□□□ -0.06
AP000439.1-201ENST00000544004 JARID2Q92833 1246 aaPredicted RBP14.7□□□□□ -0.06
AP000439.1-201ENST00000544004 OTUD5Q96G74 571 aa14.7□□□□□ -0.06
AP000439.1-201ENST00000544004 CLMNQ96JQ2 1002 aa14.7□□□□□ -0.06
AP000439.1-201ENST00000544004 SPEF2Q9C093 1822 aa14.7□□□□□ -0.06
AP000439.1-201ENST00000544004 H0YGN5 161 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 CHL1O00533 1208 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 TMPOP42166 694 aaKnown RBP14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 SP3Q02447 781 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 LMOD3Q0VAK6 560 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 MAP3K11Q16584 847 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 OTUD7BQ6GQQ9 843 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 RIC3Q7Z5B4 369 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 KIAA0825Q8IV33 1275 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 ZNF333Q96JL9 665 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 HYPKQ9NX55 129 aa14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 LAS1LQ9Y4W2 734 aaKnown RBP14.69□□□□□ -0.06
AP000439.1-201ENST00000544004 DLL1O00548 723 aa14.68□□□□□ -0.06
AP000439.1-201ENST00000544004 PPP1R12BO60237 982 aaPredicted RBP14.68□□□□□ -0.06
AP000439.1-201ENST00000544004 MMP14P50281 582 aa14.68□□□□□ -0.06
AP000439.1-201ENST00000544004 ZBED3Q96IU2 234 aaPredicted RBP14.68□□□□□ -0.06
AP000439.1-201ENST00000544004 DEFB129Q9H1M3 183 aa14.68□□□□□ -0.06
AP000439.1-201ENST00000544004 COL1A1P02452 1464 aaPredicted RBP14.68□□□□□ -0.06
AP000439.1-201ENST00000544004 PCCAP05165 728 aaPredicted RBP14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 HOXB7P09629 217 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 SLC4A8Q2Y0W8 1093 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 SLC9C1Q4G0N8 1177 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 NBPF11Q86T75 865 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 MYD88Q99836 296 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 COA1Q9GZY4 146 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 SSC5DA1L4H1 1573 aa14.67□□□□□ -0.06
AP000439.1-201ENST00000544004 ECM29Q5VYK3 1845 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 GJA5P36382 358 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 CCT4P50991 539 aaKnown RBP14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 NEUROD2Q15784 382 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 TXNRD3Q86VQ6 643 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 CCDC191Q8NCU4 936 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 CDC5LQ99459 802 aaKnown RBP14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 PTPN18Q99952 460 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 MINPP1Q9UNW1 487 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 PTCH2Q9Y6C5 1203 aa14.66□□□□□ -0.06
AP000439.1-201ENST00000544004 MYCP01106 439 aaPredicted RBP14.65□□□□□ -0.06
AP000439.1-201ENST00000544004 SLC17A8Q8NDX2 589 aa14.65□□□□□ -0.06
AP000439.1-201ENST00000544004 TESPA1A2RU30 521 aaPredicted RBP14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 UNCXA6NJT0 531 aa14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 GTF2IP78347 998 aa14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 DLGAP5Q15398 846 aa14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 DUSP27Q5VZP5 1158 aa14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 PHAXQ9H814 394 aaKnown RBP14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 BSDC1Q9NW68 430 aaPredicted RBP14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 MYH3P11055 1940 aa14.64□□□□□ -0.07
AP000439.1-201ENST00000544004 IREB2P48200 963 aaKnown RBP14.63□□□□□ -0.07
AP000439.1-201ENST00000544004 ARHGEF6Q15052 776 aa14.63□□□□□ -0.07
AP000439.1-201ENST00000544004 SUPT20HL1Q3ZLR7 823 aa14.63□□□□□ -0.07
AP000439.1-201ENST00000544004 RBM27Q9P2N5 1060 aaKnown RBP14.63□□□□□ -0.07
AP000439.1-201ENST00000544004 PPP2R3BQ9Y5P8 575 aa14.63□□□□□ -0.07
AP000439.1-201ENST00000544004 CEP290O15078 2479 aa14.63□□□□□ -0.07
AP000439.1-201ENST00000544004 OTOFQ9HC10 1997 aa14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 USP2O75604 605 aaPredicted RBP14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 CTSWP56202 376 aa14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 ANKRD13AQ8IZ07 590 aa14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 TTLL11Q8NHH1 800 aa14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 GREM2Q9H772 168 aa14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 LEMD3Q9Y2U8 911 aa14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 PCDHAC2Q9Y5I4 1007 aa14.62□□□□□ -0.07
AP000439.1-201ENST00000544004 CLRN2A0PK11 232 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms