RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 KCNQ5Q9NR82 932 aa18.73■□□□□ 0.59
CD9-210ENST00000543916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.73■□□□□ 0.59
CD9-210ENST00000543916 G3V3G9 751 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 RAD17O75943 681 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 CXCL9Q07325 125 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 TFCP2Q12800 502 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 PUM3Q15397 648 aaKnown RBP18.72■□□□□ 0.59
CD9-210ENST00000543916 DCAF8Q5TAQ9 597 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 DPY19L2Q6NUT2 758 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 CEP126Q9P2H0 1117 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
CD9-210ENST00000543916 KDM2BQ8NHM5 1336 aa18.72■□□□□ 0.59
CD9-210ENST00000543916 SURF6O75683 361 aaKnown RBP18.71■□□□□ 0.59
CD9-210ENST00000543916 SASH1O94885 1247 aa18.71■□□□□ 0.59
CD9-210ENST00000543916 G3BP1Q13283 466 aaKnown RBP eCLIP18.71■□□□□ 0.59
CD9-210ENST00000543916 COA1Q9GZY4 146 aa18.71■□□□□ 0.59
CD9-210ENST00000543916 CIAPIN1Q6FI81 312 aa18.7■□□□□ 0.58
CD9-210ENST00000543916 GPC2Q8N158 579 aa18.7■□□□□ 0.58
CD9-210ENST00000543916 NMRK2Q9NPI5 230 aa18.7■□□□□ 0.58
CD9-210ENST00000543916 GJA3Q9Y6H8 435 aa18.7■□□□□ 0.58
CD9-210ENST00000543916 MYH13Q9UKX3 1938 aa18.7■□□□□ 0.58
CD9-210ENST00000543916 SCN4AP35499 1836 aa18.7■□□□□ 0.58
CD9-210ENST00000543916 ZNF609O15014 1411 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 GYG1P46976 350 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 IRX6P78412 446 aaPredicted RBP18.69■□□□□ 0.58
CD9-210ENST00000543916 ATP2B3Q16720 1220 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 ZNF804AQ7Z570 1209 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 LPIN2Q92539 896 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 FAM84BQ96KN1 310 aaPredicted RBP18.69■□□□□ 0.58
CD9-210ENST00000543916 GPBP1L1Q9HC44 474 aaPredicted RBP18.69■□□□□ 0.58
CD9-210ENST00000543916 EXOC6BQ9Y2D4 811 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
CD9-210ENST00000543916 POTECB2RU33 542 aa18.68■□□□□ 0.58
CD9-210ENST00000543916 PSMD14O00487 310 aa18.68■□□□□ 0.58
CD9-210ENST00000543916 HMMRO75330 724 aa18.68■□□□□ 0.58
CD9-210ENST00000543916 IFIT1P09914 478 aaKnown RBP18.68■□□□□ 0.58
CD9-210ENST00000543916 SLC5A1P13866 664 aa18.68■□□□□ 0.58
CD9-210ENST00000543916 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
CD9-210ENST00000543916 PODNQ7Z5L7 613 aa18.68■□□□□ 0.58
CD9-210ENST00000543916 CD209Q9NNX6 404 aa18.68■□□□□ 0.58
CD9-210ENST00000543916 IL1R1P14778 569 aa18.67■□□□□ 0.58
CD9-210ENST00000543916 TNIP1Q15025 636 aa18.67■□□□□ 0.58
CD9-210ENST00000543916 L3MBTL3Q96JM7 780 aaPredicted RBP18.67■□□□□ 0.58
CD9-210ENST00000543916 RRAGCQ9HB90 399 aa18.67■□□□□ 0.58
CD9-210ENST00000543916 HIBADHP31937 336 aaKnown RBP18.66■□□□□ 0.58
CD9-210ENST00000543916 FBXO33Q7Z6M2 555 aa18.66■□□□□ 0.58
CD9-210ENST00000543916 A0A1B0GUL7 405 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 USP17L3A6NCW0 530 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 USP17L4A6NCW7 530 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 VIL1P09327 827 aaKnown RBP18.65■□□□□ 0.58
CD9-210ENST00000543916 ADORA1P30542 326 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 GMPSP49915 693 aaPredicted RBP18.65■□□□□ 0.58
CD9-210ENST00000543916 BCAMP50895 628 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 SCNN1DP51172 638 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 TIMM10P62072 90 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 USP17L1Q7RTZ2 530 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
CD9-210ENST00000543916 ZBTB12Q9Y330 459 aaPredicted RBP18.65■□□□□ 0.58
CD9-210ENST00000543916 CAVIN4Q5BKX8 364 aa18.64■□□□□ 0.57
CD9-210ENST00000543916 TDRD7Q8NHU6 1098 aaKnown RBP18.64■□□□□ 0.57
CD9-210ENST00000543916 FBXW7Q969H0 707 aa18.64■□□□□ 0.57
CD9-210ENST00000543916 IQSEC3Q9UPP2 1182 aaPredicted RBP18.64■□□□□ 0.57
CD9-210ENST00000543916 KIF3CO14782 793 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 GTF2IP78347 998 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 HSP90AB4PQ58FF6 505 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 TNNI3KQ59H18 835 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 DACT2Q5SW24 774 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 VPS37DQ86XT2 251 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 MXD3Q9BW11 206 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 GPR108Q9NPR9 543 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 FPGT-TNNI3KV9GXZ4 949 aa18.63■□□□□ 0.57
CD9-210ENST00000543916 COL1A1P02452 1464 aaPredicted RBP18.63■□□□□ 0.57
CD9-210ENST00000543916 APBB1O00213 710 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 VEGFAP15692 232 aaPredicted RBP18.62■□□□□ 0.57
CD9-210ENST00000543916 PHKA1P46020 1223 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 AAMPQ13685 434 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 STRIP1Q5VSL9 837 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 TTLL5Q6EMB2 1281 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 RSBN1LQ6PCB5 846 aaPredicted RBP18.62■□□□□ 0.57
CD9-210ENST00000543916 ERC1Q8IUD2 1116 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 RHPN1Q8TCX5 695 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 XAGE2Q96GT9 111 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 NEUROD6Q96NK8 337 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 JAG2Q9Y219 1238 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 ADAMTSL1Q8N6G6 1762 aa18.62■□□□□ 0.57
CD9-210ENST00000543916 FAM205AQ6ZU69 1335 aa18.61■□□□□ 0.57
CD9-210ENST00000543916 SHTN1A0MZ66 631 aa18.61■□□□□ 0.57
CD9-210ENST00000543916 EPS15P42566 896 aa18.61■□□□□ 0.57
CD9-210ENST00000543916 GMLQ99445 158 aa18.61■□□□□ 0.57
CD9-210ENST00000543916 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
CD9-210ENST00000543916 HACL1Q9UJ83 578 aa18.61■□□□□ 0.57
CD9-210ENST00000543916 IQCA1LA6NCM1 817 aa18.6■□□□□ 0.57
CD9-210ENST00000543916 RAB11FIP3O75154 756 aa18.6■□□□□ 0.57
CD9-210ENST00000543916 RPS12P25398 132 aaKnown RBP18.6■□□□□ 0.57
CD9-210ENST00000543916 CCDC102BQ68D86 513 aa18.6■□□□□ 0.57
CD9-210ENST00000543916 KIF1BPQ96EK5 621 aa18.6■□□□□ 0.57
CD9-210ENST00000543916 TAF1DQ9H5J8 278 aaPredicted RBP18.6■□□□□ 0.57
CD9-210ENST00000543916 IL1RAPL2Q9NP60 686 aa18.6■□□□□ 0.57
CD9-210ENST00000543916 LMOD1P29536 600 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms