RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 NTSR2O95665 410 aa20.3■□□□□ 0.84
PTPRO-209ENST00000543886 ZSCAN22P10073 491 aaPredicted RBP20.3■□□□□ 0.84
PTPRO-209ENST00000543886 MPHOSPH8Q99549 860 aa20.3■□□□□ 0.84
PTPRO-209ENST00000543886 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
PTPRO-209ENST00000543886 ARAP2Q8WZ64 1704 aa20.3■□□□□ 0.84
PTPRO-209ENST00000543886 HMGB1P09429 215 aaKnown RBP20.3■□□□□ 0.84
PTPRO-209ENST00000543886 MCAMP43121 646 aa20.3■□□□□ 0.84
PTPRO-209ENST00000543886 ST3GAL1Q11201 340 aa20.3■□□□□ 0.84
PTPRO-209ENST00000543886 OSBP2Q969R2 916 aa20.3■□□□□ 0.84
PTPRO-209ENST00000543886 MRE11P49959 708 aa20.29■□□□□ 0.84
PTPRO-209ENST00000543886 PI16Q6UXB8 463 aa20.29■□□□□ 0.84
PTPRO-209ENST00000543886 LPIN2Q92539 896 aa20.29■□□□□ 0.84
PTPRO-209ENST00000543886 UQCRFS1P1P0C7P4 283 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 TTF1Q15361 905 aaPredicted RBP20.28■□□□□ 0.84
PTPRO-209ENST00000543886 ZSCAN25Q6NSZ9 544 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 CLEC4GQ6UXB4 293 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 APPBP2Q92624 585 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
PTPRO-209ENST00000543886 AKAP11Q9UKA4 1901 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 RTL9Q8NET4 1388 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 SLC5A1P13866 664 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 CAVIN1Q6NZI2 390 aaKnown RBP20.28■□□□□ 0.84
PTPRO-209ENST00000543886 THSD7AQ9UPZ6 1657 aa20.28■□□□□ 0.84
PTPRO-209ENST00000543886 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.84
PTPRO-209ENST00000543886 IGHMBP2P38935 993 aaKnown RBP20.27■□□□□ 0.84
PTPRO-209ENST00000543886 FOXD4L6Q3SYB3 417 aaPredicted RBP20.27■□□□□ 0.84
PTPRO-209ENST00000543886 CCDC102BQ68D86 513 aa20.27■□□□□ 0.84
PTPRO-209ENST00000543886 FOXD4L3Q6VB84 417 aaPredicted RBP20.27■□□□□ 0.84
PTPRO-209ENST00000543886 HELBQ8NG08 1087 aaPredicted RBP20.27■□□□□ 0.84
PTPRO-209ENST00000543886 SEC31BQ9NQW1 1179 aa20.27■□□□□ 0.84
PTPRO-209ENST00000543886 ATP6V1DQ9Y5K8 247 aa20.27■□□□□ 0.84
PTPRO-209ENST00000543886 LAMA4Q16363 1823 aa20.27■□□□□ 0.83
PTPRO-209ENST00000543886 MBD3O95983 291 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 FGD1P98174 961 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 Q6ZUG5 572 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 STOX1Q6ZVD7 989 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 GPT2Q8TD30 523 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 CTNNA3Q9UI47 895 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 BTAF1O14981 1849 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 F13A1P00488 732 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPRO-209ENST00000543886 FGFR2P21802 821 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 ARID4AP29374 1257 aaPredicted RBP20.26■□□□□ 0.83
PTPRO-209ENST00000543886 GRPEL1Q9HAV7 217 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
PTPRO-209ENST00000543886 PDIA4P13667 645 aaKnown RBP20.25■□□□□ 0.83
PTPRO-209ENST00000543886 PHKA1P46020 1223 aa20.25■□□□□ 0.83
PTPRO-209ENST00000543886 KCNQ4P56696 695 aa20.25■□□□□ 0.83
PTPRO-209ENST00000543886 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
PTPRO-209ENST00000543886 STK3Q13188 491 aa20.25■□□□□ 0.83
PTPRO-209ENST00000543886 DHX32Q7L7V1 743 aaKnown RBP20.25■□□□□ 0.83
PTPRO-209ENST00000543886 PDCP20941 246 aa20.24■□□□□ 0.83
PTPRO-209ENST00000543886 MEX3CQ5U5Q3 659 aaKnown RBP20.24■□□□□ 0.83
PTPRO-209ENST00000543886 E7EWF7 191 aa20.23■□□□□ 0.83
PTPRO-209ENST00000543886 MTMR6Q9Y217 621 aa20.23■□□□□ 0.83
PTPRO-209ENST00000543886 VPS37CA5D8V6 355 aaPredicted RBP20.23■□□□□ 0.83
PTPRO-209ENST00000543886 RGL2O15211 777 aa20.23■□□□□ 0.83
PTPRO-209ENST00000543886 ADD2P35612 726 aa20.23■□□□□ 0.83
PTPRO-209ENST00000543886 IMMTQ16891 758 aaKnown RBP20.23■□□□□ 0.83
PTPRO-209ENST00000543886 ZSCAN23Q3MJ62 389 aa20.23■□□□□ 0.83
PTPRO-209ENST00000543886 SLC9C2Q5TAH2 1124 aa20.23■□□□□ 0.83
PTPRO-209ENST00000543886 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
PTPRO-209ENST00000543886 CDC5LQ99459 802 aaKnown RBP20.23■□□□□ 0.83
PTPRO-209ENST00000543886 PUS7LQ9H0K6 701 aaKnown RBP20.23■□□□□ 0.83
PTPRO-209ENST00000543886 PIH1D3Q9NQM4 214 aaKnown RBP20.23■□□□□ 0.83
PTPRO-209ENST00000543886 IDH1O75874 414 aaKnown RBP20.22■□□□□ 0.83
PTPRO-209ENST00000543886 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
PTPRO-209ENST00000543886 GAS2L3Q86XJ1 694 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 BRF1Q92994 677 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 GTF3C6Q969F1 213 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 ATRNO75882 1429 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 GPAA1O43292 621 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 DTNBO60941 627 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 RC3H1Q5TC82 1133 aaKnown RBP20.22■□□□□ 0.83
PTPRO-209ENST00000543886 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 LRRC2Q9BYS8 371 aa20.22■□□□□ 0.83
PTPRO-209ENST00000543886 A0A0G2JLW4 131 aa20.21■□□□□ 0.83
PTPRO-209ENST00000543886 ZNF445P59923 1031 aa20.21■□□□□ 0.83
PTPRO-209ENST00000543886 ERFEQ4G0M1 354 aa20.21■□□□□ 0.83
PTPRO-209ENST00000543886 GDPD2Q9HCC8 539 aa20.21■□□□□ 0.83
PTPRO-209ENST00000543886 UBE3CQ15386 1083 aa20.2■□□□□ 0.82
PTPRO-209ENST00000543886 USP48Q86UV5 1035 aa20.2■□□□□ 0.82
PTPRO-209ENST00000543886 SPATA5Q8NB90 893 aa20.2■□□□□ 0.82
PTPRO-209ENST00000543886 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
PTPRO-209ENST00000543886 RBM27Q9P2N5 1060 aaKnown RBP20.2■□□□□ 0.82
PTPRO-209ENST00000543886 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
PTPRO-209ENST00000543886 EXOSC10Q01780 885 aaKnown RBP20.2■□□□□ 0.82
PTPRO-209ENST00000543886 BICDL1Q6ZP65 573 aa20.2■□□□□ 0.82
PTPRO-209ENST00000543886 CCNL1Q9UK58 526 aaPredicted RBP20.2■□□□□ 0.82
PTPRO-209ENST00000543886 FOXP2O15409 715 aa20.19■□□□□ 0.82
PTPRO-209ENST00000543886 RPS6KA4O75676 772 aa20.19■□□□□ 0.82
PTPRO-209ENST00000543886 GTF2E1P29083 439 aaPredicted RBP20.19■□□□□ 0.82
PTPRO-209ENST00000543886 TCHHQ07283 1943 aa20.19■□□□□ 0.82
PTPRO-209ENST00000543886 MYO5AQ9Y4I1 1855 aaKnown RBP20.19■□□□□ 0.82
PTPRO-209ENST00000543886 GNPATO15228 680 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 FGAP02671 866 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 PDE6AP16499 860 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 CHRNDQ07001 517 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 CSPP1Q1MSJ5 1256 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 PANK2Q9BZ23 570 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms