RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 TMEM131LA2VDJ0 1609 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 HOXB7P09629 217 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 FBLN1P23142 703 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 TXLNAP40222 546 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 PPP2R3AQ06190 1150 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 RRS1Q15050 365 aaKnown RBP5.77□□□□□ -1.49
LMO3-229ENST00000543721 RSRC2Q7L4I2 434 aaKnown RBP5.77□□□□□ -1.49
LMO3-229ENST00000543721 WAPLQ7Z5K2 1190 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 TICAM2Q86XR7 235 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 SUGP1Q8IWZ8 645 aaKnown RBP5.77□□□□□ -1.49
LMO3-229ENST00000543721 SMARCC2Q8TAQ2 1214 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 UTP14AQ9BVJ6 771 aaKnown RBP5.77□□□□□ -1.49
LMO3-229ENST00000543721 FUT8Q9BYC5 575 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 ATG3Q9NT62 314 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 SBNO1A3KN83 1393 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 SIGLEC1Q9BZZ2 1709 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 MAP2K7O14733 419 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 HSP90B1P14625 803 aaKnown RBP5.77□□□□□ -1.49
LMO3-229ENST00000543721 ME1P48163 572 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 ST5P78524 1137 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 TOB2Q14106 344 aaPredicted RBP5.77□□□□□ -1.49
LMO3-229ENST00000543721 TRIM65Q6PJ69 517 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 EFCAB13Q8IY85 973 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 KCNG4Q8TDN1 519 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 MED4Q9NPJ6 270 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 PARP3Q9Y6F1 533 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 FAM208AQ9UK61 1670 aaKnown RBP5.77□□□□□ -1.49
LMO3-229ENST00000543721 RFX7Q2KHR2 1363 aa5.77□□□□□ -1.49
LMO3-229ENST00000543721 YEATS4O95619 227 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 SLC3A2P08195 630 aaKnown RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 MCM3P25205 808 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 FANCCQ00597 558 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 SF3A1Q15459 793 aaKnown RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 LONRF2Q1L5Z9 754 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 SWT1Q5T5J6 900 aaKnown RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 REXO1L1PQ8IX06 675 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 FAM71BQ8TC56 605 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 NUDT16Q96DE0 195 aaKnown RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 NEK1Q96PY6 1258 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 TMX1Q9H3N1 280 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 ADCY9O60503 1353 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 STX10O60499 249 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 CPP00450 1065 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 TOP1P11387 765 aaKnown RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 EIF5P55010 431 aaKnown RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 APOBRQ0VD83 1088 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 USPL1Q5W0Q7 1092 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 FMR1NBQ8N0W7 255 aaPredicted RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 PARD6BQ9BYG5 372 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 RTEL1Q9NZ71 1219 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 MRFAP1Q9Y605 127 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 PFKFB2O60825 505 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 ALDH1L1O75891 902 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 USP5P45974 858 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 NMIQ13287 307 aaPredicted RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 CTCFLQ8NI51 663 aaPredicted RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 CEP89Q96ST8 783 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 TACO1Q9BSH4 297 aaKnown RBP5.76□□□□□ -1.49
LMO3-229ENST00000543721 JCADQ9P266 1359 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 C3P01024 1663 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 RGPD1P0DJD0 1748 aa5.76□□□□□ -1.49
LMO3-229ENST00000543721 A0A087WUV0 522 aaPredicted RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 SEC31AO94979 1220 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 ATP2B1P20020 1258 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 ADD1P35611 737 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 UBASH3AP57075 661 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 CORO7P57737 925 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 GNG11P61952 73 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 TAF7Q15545 349 aaPredicted RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 OLFM4Q6UX06 510 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 PPP2R2CQ9Y2T4 447 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 AKAP12Q02952 1782 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 GNAT3A8MTJ3 354 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 SASH3O75995 380 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 SERPINC1P01008 464 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 SF3B2Q13435 895 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 HDGFL1Q5TGJ6 251 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 SRGAP1Q7Z6B7 1085 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 DNAAF4Q8WXU2 420 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 FSD1Q9BTV5 496 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 RAB21Q9UL25 225 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 KDRP35968 1356 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 MED23Q9ULK4 1368 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 A6NNZ2 444 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 EIF3CLB5ME19 914 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 TRIM66O15016 1216 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 RGL2O15211 777 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 PPFIA4O75335 1185 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 MYL5Q02045 173 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 STK3Q13188 491 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 G3BP1Q13283 466 aaKnown RBP eCLIP5.75□□□□□ -1.49
LMO3-229ENST00000543721 STK38Q15208 465 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 MTHFSDQ2M296 383 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 TUBB8Q3ZCM7 444 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 DNAJC21Q5F1R6 531 aaKnown RBP5.75□□□□□ -1.49
LMO3-229ENST00000543721 MMS22LQ6ZRQ5 1243 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 BRAPQ7Z569 592 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 VSTM4Q8IW00 320 aa5.75□□□□□ -1.49
LMO3-229ENST00000543721 ZNF622Q969S3 477 aaKnown RBP eCLIP5.75□□□□□ -1.49
LMO3-229ENST00000543721 CCDC34Q96HJ3 373 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms