RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 CST9Q5W186 159 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 TTLL5Q6EMB2 1281 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 KRT26Q7Z3Y9 468 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 SULF1Q8IWU6 871 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 TRPM4Q8TD43 1214 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 CAPNS2Q96L46 248 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 SPINK5Q9NQ38 1064 aaPredicted RBP9.05□□□□□ -0.96
NUP43-206ENST00000543637 HDAC9Q9UKV0 1011 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 ZNF804BA4D1E1 1349 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 MYO3BQ8WXR4 1341 aa9.05□□□□□ -0.96
NUP43-206ENST00000543637 SCN9AQ15858 1988 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 MED23Q9ULK4 1368 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 GRM8O00222 908 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 PLIN1O60240 522 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 NPM3O75607 178 aaKnown RBP9.04□□□□□ -0.96
NUP43-206ENST00000543637 MAP2K2P36507 400 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 CHRNDQ07001 517 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 SCARF1Q14162 830 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 CYP4F22Q6NT55 531 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 LDHAL6AQ6ZMR3 332 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 HHIPL1Q96JK4 782 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 CNNM1Q9NRU3 951 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 COL4A1P02462 1669 aa9.04□□□□□ -0.96
NUP43-206ENST00000543637 SHTN1A0MZ66 631 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 FOXN1O15353 648 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 CASP7P55210 303 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 FOXO4P98177 505 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 FAM161AQ3B820 660 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 STRIP1Q5VSL9 837 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 ZNF804AQ7Z570 1209 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 SAPCD2Q86UD0 394 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 MYOZ2Q9NPC6 264 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 PTPRCP08575 1304 aa9.03□□□□□ -0.96
NUP43-206ENST00000543637 CCER2I3L3R5 266 aa9.02□□□□□ -0.97
NUP43-206ENST00000543637 TAF5LO75529 589 aa9.02□□□□□ -0.97
NUP43-206ENST00000543637 HUNKP57058 714 aa9.02□□□□□ -0.97
NUP43-206ENST00000543637 ZNF280AP59817 542 aaPredicted RBP9.02□□□□□ -0.97
NUP43-206ENST00000543637 GTF2IP78347 998 aa9.02□□□□□ -0.97
NUP43-206ENST00000543637 SLFN5Q08AF3 891 aa9.02□□□□□ -0.97
NUP43-206ENST00000543637 ALDH1L2Q3SY69 923 aa9.02□□□□□ -0.97
NUP43-206ENST00000543637 ANGEL2Q5VTE6 544 aaKnown RBP9.02□□□□□ -0.97
NUP43-206ENST00000543637 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
NUP43-206ENST00000543637 HELBQ8NG08 1087 aaPredicted RBP9.02□□□□□ -0.97
NUP43-206ENST00000543637 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
NUP43-206ENST00000543637 GBA2Q9HCG7 927 aaPredicted RBP9.02□□□□□ -0.97
NUP43-206ENST00000543637 AKAP11Q9UKA4 1901 aa9.01□□□□□ -0.97
NUP43-206ENST00000543637 NF2P35240 595 aa9.01□□□□□ -0.97
NUP43-206ENST00000543637 LBX1P52954 281 aa9.01□□□□□ -0.97
NUP43-206ENST00000543637 CD209Q9NNX6 404 aa9.01□□□□□ -0.97
NUP43-206ENST00000543637 GGA3Q9NZ52 723 aa9.01□□□□□ -0.97
NUP43-206ENST00000543637 HDAC5Q9UQL6 1122 aa9.01□□□□□ -0.97
NUP43-206ENST00000543637 WTIPA6NIX2 430 aaPredicted RBP9□□□□□ -0.97
NUP43-206ENST00000543637 ADM5C9JUS6 153 aa9□□□□□ -0.97
NUP43-206ENST00000543637 CA12O43570 354 aa9□□□□□ -0.97
NUP43-206ENST00000543637 AOC2O75106 756 aa9□□□□□ -0.97
NUP43-206ENST00000543637 CAPN15O75808 1086 aa9□□□□□ -0.97
NUP43-206ENST00000543637 EGFRP00533 1210 aa9□□□□□ -0.97
NUP43-206ENST00000543637 CT47B1P0C2W7 299 aaPredicted RBP9□□□□□ -0.97
NUP43-206ENST00000543637 ZNF157P51786 506 aaPredicted RBP9□□□□□ -0.97
NUP43-206ENST00000543637 NOGQ13253 232 aa9□□□□□ -0.97
NUP43-206ENST00000543637 TTLL12Q14166 644 aaPredicted RBP9□□□□□ -0.97
NUP43-206ENST00000543637 DACT2Q5SW24 774 aa9□□□□□ -0.97
NUP43-206ENST00000543637 RGMBQ6NW40 437 aa9□□□□□ -0.97
NUP43-206ENST00000543637 TXNRD3Q86VQ6 643 aa9□□□□□ -0.97
NUP43-206ENST00000543637 ZNF594Q96JF6 807 aaPredicted RBP9□□□□□ -0.97
NUP43-206ENST00000543637 GMLQ99445 158 aa9□□□□□ -0.97
NUP43-206ENST00000543637 ZNF521Q96K83 1311 aa9□□□□□ -0.97
NUP43-206ENST00000543637 PITPNM2Q9BZ72 1349 aa9□□□□□ -0.97
NUP43-206ENST00000543637 MYO1BO43795 1136 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 FRAT2O75474 233 aaPredicted RBP8.99□□□□□ -0.97
NUP43-206ENST00000543637 RBM5P52756 815 aaKnown RBP eCLIP8.99□□□□□ -0.97
NUP43-206ENST00000543637 FKBP1BP68106 108 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 UBE4AQ14139 1066 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 DLGAP5Q15398 846 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 CAVIN4Q5BKX8 364 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 C15orf52Q6ZUT6 534 aaKnown RBP8.99□□□□□ -0.97
NUP43-206ENST00000543637 VPS37DQ86XT2 251 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 KIAA0825Q8IV33 1275 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 SSH1Q8WYL5 1049 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 CDCA5Q96FF9 252 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 SUCLG2Q96I99 432 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 SMC4Q9NTJ3 1288 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 MROH5Q6ZUA9 1318 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 A0A1B0GUL6 1792 aa8.99□□□□□ -0.97
NUP43-206ENST00000543637 ECM29Q5VYK3 1845 aa8.98□□□□□ -0.97
NUP43-206ENST00000543637 ZNF609O15014 1411 aa8.98□□□□□ -0.97
NUP43-206ENST00000543637 NBPF7P0C2Y1 421 aaPredicted RBP8.98□□□□□ -0.97
NUP43-206ENST00000543637 HSPA8P11142 646 aaKnown RBP8.98□□□□□ -0.97
NUP43-206ENST00000543637 HIBADHP31937 336 aaKnown RBP8.98□□□□□ -0.97
NUP43-206ENST00000543637 BRPF1P55201 1214 aaPredicted RBP8.98□□□□□ -0.97
NUP43-206ENST00000543637 NBPF9Q3BBW0 867 aa8.98□□□□□ -0.97
NUP43-206ENST00000543637 EPHA10Q5JZY3 1008 aa8.98□□□□□ -0.97
NUP43-206ENST00000543637 APOBEC3FQ8IUX4 373 aaKnown RBP8.98□□□□□ -0.97
NUP43-206ENST00000543637 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
NUP43-206ENST00000543637 CDCA7LQ96GN5 454 aa8.98□□□□□ -0.97
NUP43-206ENST00000543637 MXD3Q9BW11 206 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms