RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
VPS37B-204ENST00000543590 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
VPS37B-204ENST00000543590 ZNF609O15014 1411 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 CNTNAP1P78357 1384 aa18■□□□□ 0.47
VPS37B-204ENST00000543590 PSME4Q14997 1843 aa18■□□□□ 0.47
VPS37B-204ENST00000543590 SNAP23O00161 211 aa18■□□□□ 0.47
VPS37B-204ENST00000543590 RARSP54136 660 aaKnown RBP18■□□□□ 0.47
VPS37B-204ENST00000543590 RABL6Q3YEC7 729 aaPredicted RBP18■□□□□ 0.47
VPS37B-204ENST00000543590 GMLQ99445 158 aa18■□□□□ 0.47
VPS37B-204ENST00000543590 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
VPS37B-204ENST00000543590 ZNF280AP59817 542 aaPredicted RBP17.99■□□□□ 0.47
VPS37B-204ENST00000543590 CST9Q5W186 159 aa17.99■□□□□ 0.47
VPS37B-204ENST00000543590 CDC37L1Q7L3B6 337 aa17.99■□□□□ 0.47
VPS37B-204ENST00000543590 ANKRD44Q8N8A2 993 aa17.99■□□□□ 0.47
VPS37B-204ENST00000543590 HNRNPUQ00839 825 aaKnown RBP eCLIP17.98■□□□□ 0.47
VPS37B-204ENST00000543590 KIF4BQ2VIQ3 1234 aa17.98■□□□□ 0.47
VPS37B-204ENST00000543590 DACT2Q5SW24 774 aa17.98■□□□□ 0.47
VPS37B-204ENST00000543590 C15orf52Q6ZUT6 534 aaKnown RBP17.98■□□□□ 0.47
VPS37B-204ENST00000543590 ABT1Q9ULW3 272 aaKnown RBP17.98■□□□□ 0.47
VPS37B-204ENST00000543590 IRS2Q9Y4H2 1338 aa17.97■□□□□ 0.47
VPS37B-204ENST00000543590 RASSF10A6NK89 507 aa17.97■□□□□ 0.47
VPS37B-204ENST00000543590 PLIN1O60240 522 aa17.97■□□□□ 0.47
VPS37B-204ENST00000543590 USP17L8P0C7I0 530 aa17.97■□□□□ 0.47
VPS37B-204ENST00000543590 STRIP1Q5VSL9 837 aa17.97■□□□□ 0.47
VPS37B-204ENST00000543590 PUS3Q9BZE2 481 aaKnown RBP17.97■□□□□ 0.47
VPS37B-204ENST00000543590 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
VPS37B-204ENST00000543590 TRPM7Q96QT4 1865 aa17.96■□□□□ 0.47
VPS37B-204ENST00000543590 VEGFBP49765 207 aa17.96■□□□□ 0.47
VPS37B-204ENST00000543590 DEFB115Q30KQ5 88 aa17.96■□□□□ 0.47
VPS37B-204ENST00000543590 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
VPS37B-204ENST00000543590 FBXW7Q969H0 707 aa17.96■□□□□ 0.47
VPS37B-204ENST00000543590 MXD3Q9BW11 206 aa17.96■□□□□ 0.47
VPS37B-204ENST00000543590 A0A1B0GUL6 1792 aa17.96■□□□□ 0.47
VPS37B-204ENST00000543590 CELF2O95319 508 aaKnown RBP17.95■□□□□ 0.46
VPS37B-204ENST00000543590 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
VPS37B-204ENST00000543590 DCPSQ96C86 337 aaKnown RBP17.95■□□□□ 0.46
VPS37B-204ENST00000543590 CD209Q9NNX6 404 aa17.95■□□□□ 0.46
VPS37B-204ENST00000543590 GTF2IP78347 998 aa17.95■□□□□ 0.46
VPS37B-204ENST00000543590 KRT26Q7Z3Y9 468 aa17.95■□□□□ 0.46
VPS37B-204ENST00000543590 MYOZ2Q9NPC6 264 aa17.95■□□□□ 0.46
VPS37B-204ENST00000543590 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
VPS37B-204ENST00000543590 ASTN2O75129 1339 aaPredicted RBP17.94■□□□□ 0.46
VPS37B-204ENST00000543590 MYO3BQ8WXR4 1341 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 KIF16BQ96L93 1317 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 DLK2Q6UY11 383 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 ZNF804AQ7Z570 1209 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 ARHGAP45Q92619 1136 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 ZNF408Q9H9D4 720 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 GGA3Q9NZ52 723 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 TLL2Q9Y6L7 1015 aa17.94■□□□□ 0.46
VPS37B-204ENST00000543590 ZNF646O15015 1829 aaPredicted RBP17.94■□□□□ 0.46
VPS37B-204ENST00000543590 HSPA1AP0DMV8 641 aaKnown RBP17.93■□□□□ 0.46
VPS37B-204ENST00000543590 HSPA1BP0DMV9 641 aaKnown RBP17.93■□□□□ 0.46
VPS37B-204ENST00000543590 SCARF1Q14162 830 aa17.93■□□□□ 0.46
VPS37B-204ENST00000543590 POLR2AP24928 1970 aaKnown RBP17.92■□□□□ 0.46
VPS37B-204ENST00000543590 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
VPS37B-204ENST00000543590 IL1R1P14778 569 aa17.92■□□□□ 0.46
VPS37B-204ENST00000543590 UBE4AQ14139 1066 aa17.92■□□□□ 0.46
VPS37B-204ENST00000543590 LRRC24Q50LG9 513 aa17.92■□□□□ 0.46
VPS37B-204ENST00000543590 OGFOD1Q8N543 542 aa17.92■□□□□ 0.46
VPS37B-204ENST00000543590 MROH5Q6ZUA9 1318 aa17.92■□□□□ 0.46
VPS37B-204ENST00000543590 ADM5C9JUS6 153 aa17.91■□□□□ 0.46
VPS37B-204ENST00000543590 ANGEL2Q5VTE6 544 aaKnown RBP17.91■□□□□ 0.46
VPS37B-204ENST00000543590 SAPCD2Q86UD0 394 aa17.91■□□□□ 0.46
VPS37B-204ENST00000543590 SULF1Q8IWU6 871 aa17.91■□□□□ 0.46
VPS37B-204ENST00000543590 KLHDC4Q8TBB5 520 aa17.91■□□□□ 0.46
VPS37B-204ENST00000543590 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
VPS37B-204ENST00000543590 BCAR3O75815 825 aa17.9■□□□□ 0.46
VPS37B-204ENST00000543590 MMP14P50281 582 aa17.9■□□□□ 0.46
VPS37B-204ENST00000543590 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
VPS37B-204ENST00000543590 RFX5P48382 616 aaPredicted RBP17.89■□□□□ 0.45
VPS37B-204ENST00000543590 METTL24Q5JXM2 366 aa17.89■□□□□ 0.45
VPS37B-204ENST00000543590 INTS3Q68E01 1043 aaKnown RBP17.89■□□□□ 0.45
VPS37B-204ENST00000543590 PAXIP1Q6ZW49 1069 aaPredicted RBP17.89■□□□□ 0.45
VPS37B-204ENST00000543590 KIAA0825Q8IV33 1275 aa17.89■□□□□ 0.45
VPS37B-204ENST00000543590 CAPNS2Q96L46 248 aa17.89■□□□□ 0.45
VPS37B-204ENST00000543590 GYG1P46976 350 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 NBPF9Q3BBW0 867 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 CYP4F22Q6NT55 531 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 CERS5Q8N5B7 392 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 VGLL2Q8N8G2 317 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 FRAT1Q92837 279 aaPredicted RBP17.88■□□□□ 0.45
VPS37B-204ENST00000543590 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
VPS37B-204ENST00000543590 MEIS3Q99687 375 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 WNT10BO00744 389 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 PDE8BO95263 885 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 TRIM27P14373 513 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 HIBADHP31937 336 aaKnown RBP17.88■□□□□ 0.45
VPS37B-204ENST00000543590 ECE1P42892 770 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 TDRD7Q8NHU6 1098 aaKnown RBP17.88■□□□□ 0.45
VPS37B-204ENST00000543590 HDAC9Q9UKV0 1011 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 HDAC5Q9UQL6 1122 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 LRRFIP2Q9Y608 721 aaKnown RBP17.88■□□□□ 0.45
VPS37B-204ENST00000543590 PITPNM2Q9BZ72 1349 aa17.88■□□□□ 0.45
VPS37B-204ENST00000543590 SASH1O94885 1247 aa17.87■□□□□ 0.45
VPS37B-204ENST00000543590 PTPN12Q05209 780 aaKnown RBP17.87■□□□□ 0.45
VPS37B-204ENST00000543590 GRM1Q13255 1194 aa17.87■□□□□ 0.45
VPS37B-204ENST00000543590 ATF7IPQ6VMQ6 1270 aa17.87■□□□□ 0.45
VPS37B-204ENST00000543590 CDCA5Q96FF9 252 aa17.87■□□□□ 0.45
VPS37B-204ENST00000543590 HHIPL1Q96JK4 782 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms