RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ECE2O60344 883 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 YY1P25490 414 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 DPY19L2Q6NUT2 758 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 ATG9AQ7Z3C6 839 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 ZNF526Q8TF50 670 aaPredicted RBP7.79□□□□□ -1.16
LTBR-212ENST00000543542 RWDD1Q9H446 243 aaPredicted RBP7.79□□□□□ -1.16
LTBR-212ENST00000543542 GJA3Q9Y6H8 435 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 MED23Q9ULK4 1368 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 DUOX1Q9NRD9 1551 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 SNED1Q8TER0 1413 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
LTBR-212ENST00000543542 RAB11FIP3O75154 756 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 HIBADHP31937 336 aaKnown RBP7.78□□□□□ -1.16
LTBR-212ENST00000543542 GYG1P46976 350 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 PRELPP51888 382 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 SIRT2Q8IXJ6 389 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 LPIN2Q92539 896 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 COA1Q9GZY4 146 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 ZNRF3Q9ULT6 936 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 PCDHB15Q9Y5E8 787 aa7.78□□□□□ -1.16
LTBR-212ENST00000543542 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
LTBR-212ENST00000543542 A0A1B0GUL7 405 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 RAD17O75943 681 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 SASH1O94885 1247 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 KLRK1P26718 216 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 TIMM10P62072 90 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 TNIP1Q15025 636 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 CIAPIN1Q6FI81 312 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 PODNQ7Z5L7 613 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 TXNRD3Q86VQ6 643 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 CLASRPQ8N2M8 674 aaKnown RBP7.77□□□□□ -1.17
LTBR-212ENST00000543542 VGLL2Q8N8G2 317 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 KIF1BPQ96EK5 621 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 IL1RAPL2Q9NP60 686 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 GNL3LQ9NVN8 582 aaKnown RBP7.77□□□□□ -1.17
LTBR-212ENST00000543542 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
LTBR-212ENST00000543542 NOP58Q9Y2X3 529 aaKnown RBP7.77□□□□□ -1.17
LTBR-212ENST00000543542 MYH13Q9UKX3 1938 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 KDM2BQ8NHM5 1336 aa7.77□□□□□ -1.17
LTBR-212ENST00000543542 FZD9O00144 591 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 DDNO94850 711 aaPredicted RBP7.76□□□□□ -1.17
LTBR-212ENST00000543542 IFIT2P09913 472 aaKnown RBP7.76□□□□□ -1.17
LTBR-212ENST00000543542 LMOD1P29536 600 aaPredicted RBP7.76□□□□□ -1.17
LTBR-212ENST00000543542 CHAF1AQ13111 956 aaPredicted RBP7.76□□□□□ -1.17
LTBR-212ENST00000543542 TNNI3KQ59H18 835 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 CCDC158Q5M9N0 1113 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 TTC39AQ5SRH9 613 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 AACSQ86V21 672 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 RHPN1Q8TCX5 695 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 XAGE2Q96GT9 111 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 LRRCC1Q9C099 1032 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 CCDC8Q9H0W5 538 aaPredicted RBP7.76□□□□□ -1.17
LTBR-212ENST00000543542 CD209Q9NNX6 404 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 FPGT-TNNI3KV9GXZ4 949 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 ZNF609O15014 1411 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 ZNF541Q9H0D2 1346 aa7.76□□□□□ -1.17
LTBR-212ENST00000543542 ARAP2Q8WZ64 1704 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 GLTPD2A6NH11 291 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 YDJCA8MPS7 323 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
LTBR-212ENST00000543542 FGFR2P21802 821 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 ADORA1P30542 326 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 BCAMP50895 628 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 GTF2IP78347 998 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 CXCL9Q07325 125 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 HDAC1Q13547 482 aaPredicted RBP7.75□□□□□ -1.17
LTBR-212ENST00000543542 ANKRD45Q5TZF3 282 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 TTLL5Q6EMB2 1281 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 B4GALNT3Q6L9W6 998 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 C15orf52Q6ZUT6 534 aaKnown RBP7.75□□□□□ -1.17
LTBR-212ENST00000543542 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 GPC2Q8N158 579 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 GCC1Q96CN9 775 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 FAM84BQ96KN1 310 aaPredicted RBP7.75□□□□□ -1.17
LTBR-212ENST00000543542 DCTPP1Q9H773 170 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 GPBP1L1Q9HC44 474 aaPredicted RBP7.75□□□□□ -1.17
LTBR-212ENST00000543542 GPR108Q9NPR9 543 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 JAG2Q9Y219 1238 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 COL4A5P29400 1685 aa7.75□□□□□ -1.17
LTBR-212ENST00000543542 PSMD14O00487 310 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 UQCRFS1P1P0C7P4 283 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 IL1R1P14778 569 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 CCDC102BQ68D86 513 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 FBXO33Q7Z6M2 555 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 C16orf71Q8IYS4 520 aaPredicted RBP7.74□□□□□ -1.17
LTBR-212ENST00000543542 GPATCH3Q96I76 525 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 DBNDD2Q9BQY9 259 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 KCNQ5Q9NR82 932 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 DENND2AQ9ULE3 1009 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 ZBTB12Q9Y330 459 aaPredicted RBP7.74□□□□□ -1.17
LTBR-212ENST00000543542 UTRNP46939 3433 aa7.74□□□□□ -1.17
LTBR-212ENST00000543542 IQCA1LA6NCM1 817 aa7.73□□□□□ -1.17
LTBR-212ENST00000543542 F8W031 263 aaPredicted RBP7.73□□□□□ -1.17
LTBR-212ENST00000543542 H7C1D1 291 aa7.73□□□□□ -1.17
LTBR-212ENST00000543542 IGHDP01880 384 aa7.73□□□□□ -1.17
LTBR-212ENST00000543542 PHKA1P46020 1223 aa7.73□□□□□ -1.17
LTBR-212ENST00000543542 GMPSP49915 693 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms