RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 G3V3G9 751 aa16.59■□□□□ 0.25
TNFRSF1A-215ENST00000543359 TAF5LO75529 589 aa16.59■□□□□ 0.25
TNFRSF1A-215ENST00000543359 DEFB115Q30KQ5 88 aa16.59■□□□□ 0.25
TNFRSF1A-215ENST00000543359 DCAF8Q5TAQ9 597 aa16.59■□□□□ 0.25
TNFRSF1A-215ENST00000543359 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
TNFRSF1A-215ENST00000543359 CT47B1P0C2W7 299 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 RBM26Q5T8P6 1007 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 C15orf52Q6ZUT6 534 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 HELBQ8NG08 1087 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 MXD3Q9BW11 206 aa16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 USP44Q9H0E7 712 aa16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 TLL2Q9Y6L7 1015 aa16.58■□□□□ 0.24
TNFRSF1A-215ENST00000543359 ASTN2O75129 1339 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
TNFRSF1A-215ENST00000543359 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
TNFRSF1A-215ENST00000543359 MIER1Q8N108 512 aa16.57■□□□□ 0.24
TNFRSF1A-215ENST00000543359 ABT1Q9ULW3 272 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CELF2O95319 508 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-215ENST00000543359 USP17L8P0C7I0 530 aa16.56■□□□□ 0.24
TNFRSF1A-215ENST00000543359 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
TNFRSF1A-215ENST00000543359 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
TNFRSF1A-215ENST00000543359 SAPCD2Q86UD0 394 aa16.56■□□□□ 0.24
TNFRSF1A-215ENST00000543359 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-215ENST00000543359 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-215ENST00000543359 COL13A1Q5TAT6 717 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-215ENST00000543359 PUS3Q9BZE2 481 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CD209Q9NNX6 404 aa16.55■□□□□ 0.24
TNFRSF1A-215ENST00000543359 MYOZ2Q9NPC6 264 aa16.55■□□□□ 0.24
TNFRSF1A-215ENST00000543359 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
TNFRSF1A-215ENST00000543359 RIPOR2Q9Y4F9 1068 aa16.55■□□□□ 0.24
TNFRSF1A-215ENST00000543359 SCARF1Q14162 830 aa16.54■□□□□ 0.24
TNFRSF1A-215ENST00000543359 KRT26Q7Z3Y9 468 aa16.54■□□□□ 0.24
TNFRSF1A-215ENST00000543359 ADM5C9JUS6 153 aa16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 IL1R1P14778 569 aa16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 KCNJ4P48050 445 aa16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 WBP1LQ9NX94 342 aa16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 NOB1Q9ULX3 412 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1A-215ENST00000543359 THSD7BQ9C0I4 1608 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 GTF2IP78347 998 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 IFFO2Q5TF58 517 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 ZBED3Q96IU2 234 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 HHIPL1Q96JK4 782 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CAPNS2Q96L46 248 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 CNNM1Q9NRU3 951 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 GGA3Q9NZ52 723 aa16.52■□□□□ 0.24
TNFRSF1A-215ENST00000543359 MYO3BQ8WXR4 1341 aa16.51■□□□□ 0.23
TNFRSF1A-215ENST00000543359 FOXN1O15353 648 aa16.51■□□□□ 0.23
TNFRSF1A-215ENST00000543359 NBPF9Q3BBW0 867 aa16.51■□□□□ 0.23
TNFRSF1A-215ENST00000543359 TAF7LQ5H9L4 462 aa16.51■□□□□ 0.23
TNFRSF1A-215ENST00000543359 ANGEL2Q5VTE6 544 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-215ENST00000543359 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
TNFRSF1A-215ENST00000543359 PLIN1O60240 522 aa16.5■□□□□ 0.23
TNFRSF1A-215ENST00000543359 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1A-215ENST00000543359 MMP14P50281 582 aa16.5■□□□□ 0.23
TNFRSF1A-215ENST00000543359 UBE4AQ14139 1066 aa16.5■□□□□ 0.23
TNFRSF1A-215ENST00000543359 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
TNFRSF1A-215ENST00000543359 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
TNFRSF1A-215ENST00000543359 ZNF408Q9H9D4 720 aa16.5■□□□□ 0.23
TNFRSF1A-215ENST00000543359 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
TNFRSF1A-215ENST00000543359 WNT10BO00744 389 aa16.49■□□□□ 0.23
TNFRSF1A-215ENST00000543359 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
TNFRSF1A-215ENST00000543359 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
TNFRSF1A-215ENST00000543359 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-215ENST00000543359 MROH5Q6ZUA9 1318 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 AOC2O75106 756 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 ECE1P42892 770 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 ZNF804AQ7Z570 1209 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 KIAA0825Q8IV33 1275 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 ARHGAP45Q92619 1136 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 CDCA5Q96FF9 252 aa16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-215ENST00000543359 SASH1O94885 1247 aa16.47■□□□□ 0.23
TNFRSF1A-215ENST00000543359 MAP2K2P36507 400 aa16.47■□□□□ 0.23
TNFRSF1A-215ENST00000543359 FKBP1AP62942 108 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-215ENST00000543359 FBXO33Q7Z6M2 555 aa16.47■□□□□ 0.23
TNFRSF1A-215ENST00000543359 OGFOD1Q8N543 542 aa16.47■□□□□ 0.23
TNFRSF1A-215ENST00000543359 GBA2Q9HCG7 927 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1A-215ENST00000543359 SCAF8Q9UPN6 1271 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-215ENST00000543359 FAM205AQ6ZU69 1335 aa16.46■□□□□ 0.23
TNFRSF1A-215ENST00000543359 GYG1P46976 350 aa16.46■□□□□ 0.23
TNFRSF1A-215ENST00000543359 HUNKP57058 714 aa16.46■□□□□ 0.23
TNFRSF1A-215ENST00000543359 MAP2K1Q02750 393 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-215ENST00000543359 PTPN12Q05209 780 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-215ENST00000543359 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
TNFRSF1A-215ENST00000543359 ZIC5Q96T25 663 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms