RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 FIBPO43427 364 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
CDH4-201ENST00000543233 G3BP1Q13283 466 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDH4-201ENST00000543233 SMC1AQ14683 1233 aaKnown RBP13.11□□□□□ -0.31
CDH4-201ENST00000543233 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 EDC3Q96F86 508 aaKnown RBP13.11□□□□□ -0.31
CDH4-201ENST00000543233 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 HOXB7P09629 217 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
CDH4-201ENST00000543233 FOXR1Q6PIV2 292 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
CDH4-201ENST00000543233 NEXNQ0ZGT2 675 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 UBXN4Q92575 508 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH4-201ENST00000543233 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 MARF1Q9Y4F3 1742 aaKnown RBP13.1□□□□□ -0.31
CDH4-201ENST00000543233 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
CDH4-201ENST00000543233 SMC2O95347 1197 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 IGKV5-2P06315 115 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 PHKG2P15735 406 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 H2AFXP16104 143 aaPredicted RBP13.1□□□□□ -0.31
CDH4-201ENST00000543233 MAP9Q49MG5 647 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 FILIP1Q7Z7B0 1213 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 LUZP1Q86V48 1076 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 TCEANC2Q96MN5 208 aa13.1□□□□□ -0.31
CDH4-201ENST00000543233 CYP27B1O15528 508 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 CABP4P57796 275 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 GNL2Q13823 731 aaKnown RBP13.09□□□□□ -0.31
CDH4-201ENST00000543233 PRPF40BQ6NWY9 871 aaKnown RBP13.09□□□□□ -0.31
CDH4-201ENST00000543233 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
CDH4-201ENST00000543233 LRRN4CLQ8ND94 238 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 LINS1Q8NG48 757 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 PIK3R5Q8WYR1 880 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
CDH4-201ENST00000543233 HSP90AB4PQ58FF6 505 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
CDH4-201ENST00000543233 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
CDH4-201ENST00000543233 EAF2Q96CJ1 260 aaPredicted RBP13.09□□□□□ -0.31
CDH4-201ENST00000543233 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
CDH4-201ENST00000543233 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.31
CDH4-201ENST00000543233 PTH1RQ03431 593 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 PDIA6Q15084 440 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 FAM227BQ96M60 508 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 PRDM11Q9NQV5 511 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 CNPY2Q9Y2B0 182 aa13.08□□□□□ -0.31
CDH4-201ENST00000543233 SGSM2O43147 1006 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.32
CDH4-201ENST00000543233 NBPF9Q3BBW0 867 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 CEP89Q96ST8 783 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
CDH4-201ENST00000543233 A0A0G2JS52 829 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 SASH1O94885 1247 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 BRD1O95696 1058 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 CCDC192P0DO97 292 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
CDH4-201ENST00000543233 CHGBP05060 677 aa13.07□□□□□ -0.32
CDH4-201ENST00000543233 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
CDH4-201ENST00000543233 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
CDH4-201ENST00000543233 VPS18Q9P253 973 aa13.07□□□□□ -0.32
CDH4-201ENST00000543233 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
CDH4-201ENST00000543233 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
CDH4-201ENST00000543233 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
CDH4-201ENST00000543233 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
CDH4-201ENST00000543233 NBPF5PQ86XG9 351 aaPredicted RBP13.06□□□□□ -0.32
CDH4-201ENST00000543233 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 JAKMIP1Q96N16 626 aaKnown RBP13.06□□□□□ -0.32
CDH4-201ENST00000543233 FSD1Q9BTV5 496 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 RAD50Q92878 1312 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 KAT6BQ8WYB5 2073 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 ADCK5Q3MIX3 580 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
CDH4-201ENST00000543233 REXO1L1PQ8IX06 675 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 JMYQ8N9B5 988 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 LIG1P18858 919 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 HSPA4P34932 840 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 AK2P54819 239 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 COL9A3Q14050 684 aaPredicted RBP13.06□□□□□ -0.32
CDH4-201ENST00000543233 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
CDH4-201ENST00000543233 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 IRAK4Q9NWZ3 460 aa13.06□□□□□ -0.32
CDH4-201ENST00000543233 A0A087WZG4 1122 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 SKILP12757 684 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH4-201ENST00000543233 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 JPH2Q9BR39 696 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms