RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 ZEB1P37275 1124 aaPredicted RBP25.09■■□□□ 1.61
CACNA1C-230ENST00000543114 EXOSC9Q06265 439 aaKnown RBP25.09■■□□□ 1.61
CACNA1C-230ENST00000543114 USP17L1Q7RTZ2 530 aa25.09■■□□□ 1.61
CACNA1C-230ENST00000543114 SULF1Q8IWU6 871 aa25.09■■□□□ 1.61
CACNA1C-230ENST00000543114 LINS1Q8NG48 757 aa25.09■■□□□ 1.61
CACNA1C-230ENST00000543114 ZNF316A6NFI3 1004 aaPredicted RBP25.08■■□□□ 1.61
CACNA1C-230ENST00000543114 ANGEL2Q5VTE6 544 aaKnown RBP25.08■■□□□ 1.61
CACNA1C-230ENST00000543114 MYH16Q9H6N6 1097 aa25.08■■□□□ 1.61
CACNA1C-230ENST00000543114 SPINK5Q9NQ38 1064 aaPredicted RBP25.08■■□□□ 1.61
CACNA1C-230ENST00000543114 CASP8AP2Q9UKL3 1982 aa25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 USP17L8P0C7I0 530 aa25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 IGHMBP2P38935 993 aaKnown RBP25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 NOGQ13253 232 aa25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 SCARF1Q14162 830 aa25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 TXNRD3Q86VQ6 643 aa25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 CDCA5Q96FF9 252 aa25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 MYOZ2Q9NPC6 264 aa25.07■■□□□ 1.6
CACNA1C-230ENST00000543114 CA12O43570 354 aa25.06■■□□□ 1.6
CACNA1C-230ENST00000543114 KLRK1P26718 216 aa25.06■■□□□ 1.6
CACNA1C-230ENST00000543114 RGMBQ6NW40 437 aa25.06■■□□□ 1.6
CACNA1C-230ENST00000543114 C2orf69Q8N8R5 385 aa25.06■■□□□ 1.6
CACNA1C-230ENST00000543114 ABHD8Q96I13 439 aa25.06■■□□□ 1.6
CACNA1C-230ENST00000543114 FAM155AB1AL88 458 aaPredicted RBP25.05■■□□□ 1.6
CACNA1C-230ENST00000543114 CSF1RP07333 972 aa25.05■■□□□ 1.6
CACNA1C-230ENST00000543114 DACT2Q5SW24 774 aa25.05■■□□□ 1.6
CACNA1C-230ENST00000543114 MXD3Q9BW11 206 aa25.05■■□□□ 1.6
CACNA1C-230ENST00000543114 PAPPA2Q9BXP8 1791 aa25.05■■□□□ 1.6
CACNA1C-230ENST00000543114 LEMD3Q9Y2U8 911 aa25.04■■□□□ 1.6
CACNA1C-230ENST00000543114 F6X3S4 739 aa25.03■■□□□ 1.6
CACNA1C-230ENST00000543114 COA1Q9GZY4 146 aa25.03■■□□□ 1.6
CACNA1C-230ENST00000543114 ZNF804BA4D1E1 1349 aa25.03■■□□□ 1.6
CACNA1C-230ENST00000543114 PITPNM2Q9BZ72 1349 aa25.03■■□□□ 1.6
CACNA1C-230ENST00000543114 FBXW7Q969H0 707 aa25.02■■□□□ 1.6
CACNA1C-230ENST00000543114 MPHOSPH8Q99549 860 aa25.02■■□□□ 1.6
CACNA1C-230ENST00000543114 SCAF8Q9UPN6 1271 aaKnown RBP25.02■■□□□ 1.6
CACNA1C-230ENST00000543114 BEND3Q5T5X7 828 aa25.01■■□□□ 1.59
CACNA1C-230ENST00000543114 STRIP1Q5VSL9 837 aa25.01■■□□□ 1.59
CACNA1C-230ENST00000543114 ANKRD2Q9GZV1 360 aa25.01■■□□□ 1.59
CACNA1C-230ENST00000543114 ZNF157P51786 506 aaPredicted RBP25■■□□□ 1.59
CACNA1C-230ENST00000543114 CHRNDQ07001 517 aa25■■□□□ 1.59
CACNA1C-230ENST00000543114 NBPF9Q3BBW0 867 aa25■■□□□ 1.59
CACNA1C-230ENST00000543114 MYO3BQ8WXR4 1341 aa25■■□□□ 1.59
CACNA1C-230ENST00000543114 AKAP11Q9UKA4 1901 aa25■■□□□ 1.59
CACNA1C-230ENST00000543114 SLC10A3P09131 477 aa24.99■■□□□ 1.59
CACNA1C-230ENST00000543114 FOXO4P98177 505 aa24.99■■□□□ 1.59
CACNA1C-230ENST00000543114 FAM9BQ8IZU0 186 aa24.99■■□□□ 1.59
CACNA1C-230ENST00000543114 CCDC102AQ96A19 550 aa24.99■■□□□ 1.59
CACNA1C-230ENST00000543114 ANKRD18BA2A2Z9 1011 aa24.98■■□□□ 1.59
CACNA1C-230ENST00000543114 IRS2Q9Y4H2 1338 aa24.97■■□□□ 1.59
CACNA1C-230ENST00000543114 SNAP23O00161 211 aa24.97■■□□□ 1.59
CACNA1C-230ENST00000543114 KCNJ4P48050 445 aa24.97■■□□□ 1.59
CACNA1C-230ENST00000543114 KIF23Q02241 960 aaPredicted RBP24.97■■□□□ 1.59
CACNA1C-230ENST00000543114 WNT10BO00744 389 aa24.96■■□□□ 1.59
CACNA1C-230ENST00000543114 OGFOD1Q8N543 542 aa24.96■■□□□ 1.59
CACNA1C-230ENST00000543114 TAF5LO75529 589 aa24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 SASH1O94885 1247 aa24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 IFIT5Q13325 482 aaKnown RBP24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 EPHA10Q5JZY3 1008 aa24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 PRAMEF18Q5VWM3 479 aa24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 TTLL5Q6EMB2 1281 aa24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 RASAL3Q86YV0 1011 aa24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 CHMP3Q9Y3E7 222 aa24.95■■□□□ 1.58
CACNA1C-230ENST00000543114 GRM8O00222 908 aa24.94■■□□□ 1.58
CACNA1C-230ENST00000543114 FKBP1BP68106 108 aa24.94■■□□□ 1.58
CACNA1C-230ENST00000543114 GTF2IP78347 998 aa24.94■■□□□ 1.58
CACNA1C-230ENST00000543114 MOB2Q70IA6 237 aa24.94■■□□□ 1.58
CACNA1C-230ENST00000543114 KIAA0825Q8IV33 1275 aa24.94■■□□□ 1.58
CACNA1C-230ENST00000543114 HELBQ8NG08 1087 aaPredicted RBP24.94■■□□□ 1.58
CACNA1C-230ENST00000543114 ECM29Q5VYK3 1845 aa24.93■■□□□ 1.58
CACNA1C-230ENST00000543114 LMBR1LQ6UX01 489 aa24.93■■□□□ 1.58
CACNA1C-230ENST00000543114 MCOLN1Q9GZU1 580 aa24.93■■□□□ 1.58
CACNA1C-230ENST00000543114 CD209Q9NNX6 404 aa24.93■■□□□ 1.58
CACNA1C-230ENST00000543114 SAGE1Q9NXZ1 904 aa24.93■■□□□ 1.58
CACNA1C-230ENST00000543114 ZNF521Q96K83 1311 aa24.92■■□□□ 1.58
CACNA1C-230ENST00000543114 C15orf52Q6ZUT6 534 aaKnown RBP24.91■■□□□ 1.58
CACNA1C-230ENST00000543114 ZNF594Q96JF6 807 aaPredicted RBP24.91■■□□□ 1.58
CACNA1C-230ENST00000543114 CSRNP1Q96S65 589 aa24.91■■□□□ 1.58
CACNA1C-230ENST00000543114 CERS5Q8N5B7 392 aa24.9■■□□□ 1.58
CACNA1C-230ENST00000543114 RNF186Q9NXI6 227 aa24.9■■□□□ 1.58
CACNA1C-230ENST00000543114 CCDC85CA6NKD9 419 aa24.89■■□□□ 1.58
CACNA1C-230ENST00000543114 CCDC57Q2TAC2 916 aa24.89■■□□□ 1.58
CACNA1C-230ENST00000543114 SLC4A10Q6U841 1118 aa24.89■■□□□ 1.58
CACNA1C-230ENST00000543114 ZBED3Q96IU2 234 aaPredicted RBP24.89■■□□□ 1.58
CACNA1C-230ENST00000543114 HDAC9Q9UKV0 1011 aa24.89■■□□□ 1.58
CACNA1C-230ENST00000543114 UBE2Q2LH0YL09 131 aa24.88■■□□□ 1.57
CACNA1C-230ENST00000543114 TRPA1O75762 1119 aa24.88■■□□□ 1.57
CACNA1C-230ENST00000543114 ALDH1L1O75891 902 aa24.88■■□□□ 1.57
CACNA1C-230ENST00000543114 MMP14P50281 582 aa24.88■■□□□ 1.57
CACNA1C-230ENST00000543114 DGKZQ13574 1117 aa24.88■■□□□ 1.57
CACNA1C-230ENST00000543114 SRCIN1Q9C0H9 1055 aa24.88■■□□□ 1.57
CACNA1C-230ENST00000543114 C9orf78Q9NZ63 289 aaPredicted RBP24.88■■□□□ 1.57
CACNA1C-230ENST00000543114 ARAP2Q8WZ64 1704 aa24.87■■□□□ 1.57
CACNA1C-230ENST00000543114 TAF7LQ5H9L4 462 aa24.87■■□□□ 1.57
CACNA1C-230ENST00000543114 IL1R1P14778 569 aa24.86■■□□□ 1.57
CACNA1C-230ENST00000543114 LDHAL6AQ6ZMR3 332 aa24.86■■□□□ 1.57
CACNA1C-230ENST00000543114 ZNF804AQ7Z570 1209 aa24.86■■□□□ 1.57
CACNA1C-230ENST00000543114 APOBEC3FQ8IUX4 373 aaKnown RBP24.86■■□□□ 1.57
CACNA1C-230ENST00000543114 SUCLG2Q96I99 432 aa24.86■■□□□ 1.57
CACNA1C-230ENST00000543114 COL1A1P02452 1464 aaPredicted RBP24.85■■□□□ 1.57
CACNA1C-230ENST00000543114 TTLL12Q14166 644 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms