RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 OTUD7BQ6GQQ9 843 aa12.32□□□□□ -0.44
C2CD3-219ENST00000542930 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
C2CD3-219ENST00000542930 NBPF11Q86T75 865 aa12.32□□□□□ -0.44
C2CD3-219ENST00000542930 APOBEC3FQ8IUX4 373 aaKnown RBP12.32□□□□□ -0.44
C2CD3-219ENST00000542930 PLEKHF1Q96S99 279 aa12.32□□□□□ -0.44
C2CD3-219ENST00000542930 BABAM1Q9NWV8 329 aa12.32□□□□□ -0.44
C2CD3-219ENST00000542930 CRHR2Q13324 411 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
C2CD3-219ENST00000542930 DACT2Q5SW24 774 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 XDHP47989 1333 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 MYO3BQ8WXR4 1341 aa12.31□□□□□ -0.44
C2CD3-219ENST00000542930 UNCXA6NJT0 531 aa12.3□□□□□ -0.44
C2CD3-219ENST00000542930 ATP5J2-PTCD1G3V325 749 aa12.3□□□□□ -0.44
C2CD3-219ENST00000542930 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
C2CD3-219ENST00000542930 SLC4A8Q2Y0W8 1093 aa12.3□□□□□ -0.44
C2CD3-219ENST00000542930 SLC9C1Q4G0N8 1177 aa12.3□□□□□ -0.44
C2CD3-219ENST00000542930 WNK4Q96J92 1243 aa12.3□□□□□ -0.44
C2CD3-219ENST00000542930 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
C2CD3-219ENST00000542930 LAMA3Q16787 3333 aa12.29□□□□□ -0.44
C2CD3-219ENST00000542930 SASH1O94885 1247 aa12.29□□□□□ -0.44
C2CD3-219ENST00000542930 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
C2CD3-219ENST00000542930 CAP1Q01518 475 aa12.29□□□□□ -0.44
C2CD3-219ENST00000542930 TRIM28Q13263 835 aaKnown RBP12.29□□□□□ -0.44
C2CD3-219ENST00000542930 ARHGEF6Q15052 776 aa12.29□□□□□ -0.44
C2CD3-219ENST00000542930 STRIP1Q5VSL9 837 aa12.29□□□□□ -0.44
C2CD3-219ENST00000542930 FZD1Q9UP38 647 aa12.29□□□□□ -0.44
C2CD3-219ENST00000542930 COL1A1P02452 1464 aaPredicted RBP12.28□□□□□ -0.44
C2CD3-219ENST00000542930 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
C2CD3-219ENST00000542930 PPP1R12BO60237 982 aaPredicted RBP12.28□□□□□ -0.44
C2CD3-219ENST00000542930 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
C2CD3-219ENST00000542930 CCDC152Q4G0S7 254 aa12.28□□□□□ -0.44
C2CD3-219ENST00000542930 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
C2CD3-219ENST00000542930 MXD3Q9BW11 206 aa12.28□□□□□ -0.44
C2CD3-219ENST00000542930 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
C2CD3-219ENST00000542930 LAMB1P07942 1786 aa12.28□□□□□ -0.44
C2CD3-219ENST00000542930 ZBTB38Q8NAP3 1195 aaPredicted RBP12.27□□□□□ -0.45
C2CD3-219ENST00000542930 ZBED3Q96IU2 234 aaPredicted RBP12.27□□□□□ -0.45
C2CD3-219ENST00000542930 PTPN18Q99952 460 aa12.27□□□□□ -0.45
C2CD3-219ENST00000542930 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
C2CD3-219ENST00000542930 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
C2CD3-219ENST00000542930 PNNQ9H307 717 aaKnown RBP12.27□□□□□ -0.45
C2CD3-219ENST00000542930 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
C2CD3-219ENST00000542930 CHPF2Q9P2E5 772 aa12.27□□□□□ -0.45
C2CD3-219ENST00000542930 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.45
C2CD3-219ENST00000542930 MED23Q9ULK4 1368 aa12.27□□□□□ -0.45
C2CD3-219ENST00000542930 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-219ENST00000542930 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
C2CD3-219ENST00000542930 DPF3Q92784 378 aa12.26□□□□□ -0.45
C2CD3-219ENST00000542930 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
C2CD3-219ENST00000542930 PRO3102Q9H379 93 aa12.26□□□□□ -0.45
C2CD3-219ENST00000542930 PPP2R3BQ9Y5P8 575 aa12.26□□□□□ -0.45
C2CD3-219ENST00000542930 GJA5P36382 358 aa12.25□□□□□ -0.45
C2CD3-219ENST00000542930 COA1Q9GZY4 146 aa12.25□□□□□ -0.45
C2CD3-219ENST00000542930 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
C2CD3-219ENST00000542930 UNC80Q8N2C7 3258 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 SSC5DA1L4H1 1573 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
C2CD3-219ENST00000542930 PDE8AO60658 829 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
C2CD3-219ENST00000542930 IREB2P48200 963 aaKnown RBP12.24□□□□□ -0.45
C2CD3-219ENST00000542930 RIPK4P57078 832 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 SUPT20HL1Q3ZLR7 823 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 TTLL5Q6EMB2 1281 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
C2CD3-219ENST00000542930 ZNF646O15015 1829 aaPredicted RBP12.23□□□□□ -0.45
C2CD3-219ENST00000542930 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
C2CD3-219ENST00000542930 ANKRD13AQ8IZ07 590 aa12.23□□□□□ -0.45
C2CD3-219ENST00000542930 SH3TC2Q8TF17 1288 aa12.23□□□□□ -0.45
C2CD3-219ENST00000542930 CCDC85AQ96PX6 553 aaPredicted RBP12.23□□□□□ -0.45
C2CD3-219ENST00000542930 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
C2CD3-219ENST00000542930 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
C2CD3-219ENST00000542930 MINPP1Q9UNW1 487 aa12.23□□□□□ -0.45
C2CD3-219ENST00000542930 A0A1W2PPC1 479 aa12.22□□□□□ -0.45
C2CD3-219ENST00000542930 USP2O75604 605 aaPredicted RBP12.22□□□□□ -0.45
C2CD3-219ENST00000542930 PCCAP05165 728 aaPredicted RBP12.22□□□□□ -0.45
C2CD3-219ENST00000542930 HOXB7P09629 217 aa12.22□□□□□ -0.45
C2CD3-219ENST00000542930 CCT4P50991 539 aaKnown RBP12.22□□□□□ -0.45
C2CD3-219ENST00000542930 DLGAP5Q15398 846 aa12.22□□□□□ -0.45
C2CD3-219ENST00000542930 MTMR14Q8NCE2 650 aa12.22□□□□□ -0.45
C2CD3-219ENST00000542930 MS4A4AQ96JQ5 239 aa12.22□□□□□ -0.45
C2CD3-219ENST00000542930 CDC5LQ99459 802 aaKnown RBP12.22□□□□□ -0.45
C2CD3-219ENST00000542930 BSDC1Q9NW68 430 aaPredicted RBP12.22□□□□□ -0.45
C2CD3-219ENST00000542930 ZNF804BA4D1E1 1349 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 CHL1O00533 1208 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 LMOD3Q0VAK6 560 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
C2CD3-219ENST00000542930 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 TXNRD3Q86VQ6 643 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 OPTNQ96CV9 577 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 HTATIP2Q9BUP3 242 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 NR2E3Q9Y5X4 410 aa12.21□□□□□ -0.45
C2CD3-219ENST00000542930 MYO1BO43795 1136 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 GNRH1P01148 92 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms