RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 ME1P48163 572 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 G3BP1Q13283 466 aaKnown RBP eCLIP6.19□□□□□ -1.425e-8■■□□□ 12.5
KDM3B-209ENST00000542866 ARHGAP29Q52LW3 1261 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 TMC6Q7Z403 805 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 CEP57L1Q8IYX8 460 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 LRRN4CLQ8ND94 238 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 ANO10Q9NW15 660 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 BEND3Q5T5X7 828 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 ACSBG1Q96GR2 724 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 ZNF446Q9NWS9 450 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 CPDO75976 1380 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 NALCNQ8IZF0 1738 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 HIP1O00291 1037 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 CTAGE5O15320 804 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 NRDCO43847 1150 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 RXRBP28702 533 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 CLCN6P51797 869 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 RESTQ13127 1097 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 SARM1Q6SZW1 724 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 Q6ZUG5 572 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 FAM177A1Q8N128 213 aaPredicted RBP6.19□□□□□ -1.42
KDM3B-209ENST00000542866 FSIP1Q8NA03 581 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 MNS1Q8NEH6 495 aa6.19□□□□□ -1.42
KDM3B-209ENST00000542866 EDC3Q96F86 508 aaKnown RBP6.19□□□□□ -1.42
KDM3B-209ENST00000542866 FMN2Q9NZ56 1722 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 KIF1AQ12756 1690 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 KIF2AO00139 706 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 BIN1O00499 593 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 HNRNPH2P55795 449 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 TMCO3Q6UWJ1 677 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 ZNF589Q86UQ0 364 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 UBXN4Q92575 508 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 KCNB2Q92953 911 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 NAT10Q9H0A0 1025 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 GOLPH3LQ9H4A5 285 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.18□□□□□ -1.423e-6■■□□□ 14.5
KDM3B-209ENST00000542866 DNAI1Q9UI46 699 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 THRAP3Q9Y2W1 955 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 SFPQP23246 707 aaKnown RBP eCLIP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 GSDMDP57764 484 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 CCT2P78371 535 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 CWF19L2Q2TBE0 894 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 TEX35Q5T0J7 233 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 ISM2Q6H9L7 571 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 ERC1Q8IUD2 1116 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 DHX40Q8IX18 779 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 EAF2Q96CJ1 260 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 NEK1Q96PY6 1258 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 ZSCAN16Q9H4T2 348 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 ARGLU1Q9NWB6 273 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 TLR7Q9NYK1 1049 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 IFNKQ9P0W0 207 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 SETD1AO15047 1707 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 KCNQ3O43525 872 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 URI1O94763 535 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
KDM3B-209ENST00000542866 NFATC2IPQ8NCF5 419 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 NEK11Q8NG66 645 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 PPP1R13BQ96KQ4 1090 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 USP28Q96RU2 1077 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 NDUFB9Q9Y6M9 179 aa6.18□□□□□ -1.42
KDM3B-209ENST00000542866 A0A1B0GVL5 298 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 DDX58O95786 925 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 AIMP1Q12904 312 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 GNL2Q13823 731 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 SLFNL1Q499Z3 407 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 E4F1Q66K89 784 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 KLHDC4Q8TBB5 520 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 ZBTB9Q96C00 473 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 DNAJC2Q99543 621 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 TRIM34Q9BYJ4 488 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 XPO4Q9C0E2 1151 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 TMX1Q9H3N1 280 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 MAP3K2Q9Y2U5 619 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.17□□□□□ -1.425e-7■□□□□ 10.9
KDM3B-209ENST00000542866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 USP42Q9H9J4 1324 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 RNMTO43148 476 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 SEC31AO94979 1220 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 STARD3NLO95772 234 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 PNMA6AP0CW24 399 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 HMGB2P26583 209 aaKnown RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 VPS72Q15906 364 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 CCDC129Q6ZRS4 1044 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 GJD4Q96KN9 370 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 PHKG2P15735 406 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 CYP2C19P33261 490 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 TNNT3P45378 269 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 FAM160A1Q05DH4 1040 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 SCRN1Q12765 414 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 SEPT12Q8IYM1 358 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 ZNF396Q96N95 335 aaPredicted RBP6.17□□□□□ -1.42
KDM3B-209ENST00000542866 EPC1Q9H2F5 836 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 LGR6Q9HBX8 967 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 FHOD1Q9Y613 1164 aa6.17□□□□□ -1.42
KDM3B-209ENST00000542866 PXDNQ92626 1479 aa6.16□□□□□ -1.42
KDM3B-209ENST00000542866 SASH1O94885 1247 aa6.16□□□□□ -1.42
KDM3B-209ENST00000542866 H2AFXP16104 143 aaPredicted RBP6.16□□□□□ -1.42
KDM3B-209ENST00000542866 CAPN2P17655 700 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms