RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 CCL15-CCL14A0A0B4J2E2 113 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 NBPF26B4DH59 902 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 SMIM22K7EJ46 135 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 ST18O60284 1047 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 BBOX1O75936 387 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 USP17L8P0C7I0 530 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 CAPN2P17655 700 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 OSBPP22059 807 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 PSMC4P43686 418 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 NHLH1Q02575 133 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 CCDC85BQ15834 202 aaPredicted RBP4.5□□□□□ -1.69
CHD4-209ENST00000542717 CCL15Q16663 113 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 NBPF9Q3BBW0 867 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 GAS2L1Q99501 681 aaPredicted RBP4.5□□□□□ -1.69
CHD4-209ENST00000542717 PTPN18Q99952 460 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 NBPF3Q9H094 633 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 TTYH1Q9H313 450 aaPredicted RBP4.5□□□□□ -1.69
CHD4-209ENST00000542717 TAOK2Q9UL54 1235 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 NSFL1CQ9UNZ2 370 aaKnown RBP4.5□□□□□ -1.69
CHD4-209ENST00000542717 HEG1Q9ULI3 1381 aa4.5□□□□□ -1.69
CHD4-209ENST00000542717 TAF1P21675 1872 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 ABCC4O15439 1325 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 TLR2O60603 784 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 GPR37L1O60883 481 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 KRT37O76014 449 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 VIL1P09327 827 aaKnown RBP4.49□□□□□ -1.69
CHD4-209ENST00000542717 GPTP24298 496 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 IREB2P48200 963 aaKnown RBP4.49□□□□□ -1.69
CHD4-209ENST00000542717 ZNF280AP59817 542 aaPredicted RBP4.49□□□□□ -1.69
CHD4-209ENST00000542717 PDE3AQ14432 1141 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 HLFQ16534 295 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 PODNQ7Z5L7 613 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 AEBP1Q8IUX7 1158 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 SLAIN1Q8ND83 568 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 AGBL3Q8NEM8 1001 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 FMNL2Q96PY5 1086 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 PUS7Q96PZ0 661 aaKnown RBP4.49□□□□□ -1.69
CHD4-209ENST00000542717 EYA3Q99504 573 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 TSPYL2Q9H2G4 693 aaPredicted RBP4.49□□□□□ -1.69
CHD4-209ENST00000542717 C11orf49Q9H6J7 331 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 RTL9Q8NET4 1388 aa4.49□□□□□ -1.69
CHD4-209ENST00000542717 TCF20Q9UGU0 1960 aaKnown RBP4.49□□□□□ -1.69
CHD4-209ENST00000542717 ALPK3Q96L96 1907 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 TESPA1A2RU30 521 aaPredicted RBP4.48□□□□□ -1.69
CHD4-209ENST00000542717 INHAP05111 366 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 GJA5P36382 358 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 TEFQ10587 303 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 MAP3K11Q16584 847 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 CSPP1Q1MSJ5 1256 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 SULT6B1Q6IMI4 303 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 RSBN1LQ6PCB5 846 aaPredicted RBP4.48□□□□□ -1.69
CHD4-209ENST00000542717 C3orf67Q6ZVT6 689 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 DDX46Q7L014 1031 aaKnown RBP4.48□□□□□ -1.69
CHD4-209ENST00000542717 APOBEC3FQ8IUX4 373 aaKnown RBP4.48□□□□□ -1.69
CHD4-209ENST00000542717 FAM43AQ8N2R8 423 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 OGFOD1Q8N543 542 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 NGEFQ8N5V2 710 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 ZBTB38Q8NAP3 1195 aaPredicted RBP4.48□□□□□ -1.69
CHD4-209ENST00000542717 HELBQ8NG08 1087 aaPredicted RBP4.48□□□□□ -1.69
CHD4-209ENST00000542717 BRI3BPQ8WY22 251 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 NECTIN2Q92692 538 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 OPTNQ96CV9 577 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 ZC3H12CQ9C0D7 883 aaKnown RBP4.48□□□□□ -1.69
CHD4-209ENST00000542717 ELP3Q9H9T3 547 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 PRKAG2Q9UGJ0 569 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 CPA4Q9UI42 421 aa4.48□□□□□ -1.69
CHD4-209ENST00000542717 CACNA1BQ00975 2339 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 PKD1L2Q7Z442 2459 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 ZSWIM8A7E2V4 1837 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 ADCY3O60266 1144 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 SASH1O94885 1247 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 ELNP15502 786 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 GTF2A2P52657 109 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 SMAD3P84022 425 aaKnown RBP4.47□□□□□ -1.69
CHD4-209ENST00000542717 PRKCZQ05513 592 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 GRIN2CQ14957 1233 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 SHHQ15465 462 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 AAK1Q2M2I8 961 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 ZNF790Q6PG37 636 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 POTEEQ6S8J3 1075 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 ANKRD13AQ8IZ07 590 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 ANKLE1Q8NAG6 615 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 FBXW7Q969H0 707 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 CARD11Q9BXL7 1154 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 POLKQ9UBT6 870 aa4.47□□□□□ -1.69
CHD4-209ENST00000542717 ZDBF2Q9HCK1 2354 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 COL2A1P02458 1487 aaPredicted RBP4.46□□□□□ -1.7
CHD4-209ENST00000542717 PRR33A8MZF0 331 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 WNT10BO00744 389 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 IGFBP4P22692 258 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 FCGRTP55899 365 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 GRAPQ13588 217 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 SKIV2LQ15477 1246 aaKnown RBP4.46□□□□□ -1.7
CHD4-209ENST00000542717 SUPT20HL1Q3ZLR7 823 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 SUSD4Q5VX71 490 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 KIF6Q6ZMV9 814 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 PPP1R42Q7Z4L9 355 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 GRAPLQ8TC17 118 aaPredicted RBP4.46□□□□□ -1.7
CHD4-209ENST00000542717 L3MBTL2Q969R5 705 aa4.46□□□□□ -1.7
CHD4-209ENST00000542717 MS4A4AQ96JQ5 239 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms