RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 CHD1LQ86WJ1 897 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 KIF1BPQ96EK5 621 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 NLRP3Q96P20 1036 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 ZIC5Q96T25 663 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 LRRCC1Q9C099 1032 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 HCLS1P14317 486 aaPredicted RBP15.17■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 G3BP1Q13283 466 aaKnown RBP eCLIP15.17■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 SYNE4Q8N205 404 aa15.17■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 ITGA6P23229 1130 aa15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 IL15P40933 162 aaPredicted RBP15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 CTU1Q7Z7A3 348 aaKnown RBP15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 GPC2Q8N158 579 aa15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 CDC5LQ99459 802 aaKnown RBP15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 BRIP1Q9BX63 1249 aa15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 GREM2Q9H772 168 aa15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 SAGE1Q9NXZ1 904 aa15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 RANBP2P49792 3224 aaKnown RBP15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 HTTP42858 3142 aa15.16■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 KLRG2A4D1S0 409 aaPredicted RBP15.15■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 EYA2O00167 538 aa15.15■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 PDE6BP35913 854 aa15.15■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 NOGQ13253 232 aa15.15■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 OS9Q13438 667 aaPredicted RBP15.15■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 TAF7LQ5H9L4 462 aa15.15■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 RHPN1Q8TCX5 695 aa15.15■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 FZD9O00144 591 aa15.14■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 SLC17A8Q8NDX2 589 aa15.14■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 PA2G4Q9UQ80 394 aaKnown RBP15.14■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 C7orf43Q8WVR3 580 aa15.13■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CNKSR1Q969H4 720 aa15.13■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 GPR108Q9NPR9 543 aa15.13■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 BRCA2P51587 3418 aa15.13■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CENPFP49454 3210 aa15.12■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CELF2O95319 508 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 IGHMBP2P38935 993 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 STYK1Q6J9G0 422 aa15.12■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CLASRPQ8N2M8 674 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 LNPKQ9C0E8 428 aa15.12■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 SPEF2Q9C093 1822 aa15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CCDC93Q567U6 631 aa15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 DDX46Q7L014 1031 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 ATG9AQ7Z3C6 839 aa15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 KLHDC4Q8TBB5 520 aa15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 AOX1Q06278 1338 aa15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 MROH5Q6ZUA9 1318 aa15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 A0A1B0GUL6 1792 aa15.11■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 SASH1O94885 1247 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 SRGNP10124 158 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 LDHAL6AQ6ZMR3 332 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 MPHOSPH8Q99549 860 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 SIL1Q9H173 461 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 OSBPL3Q9H4L5 887 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 RIPOR2Q9Y4F9 1068 aa15.1■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 COL4A5P29400 1685 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 EPS15P42566 896 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 SCNN1DP51172 638 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 USP50Q70EL3 339 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CCDC24Q8N4L8 307 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 RPGRQ92834 1020 aaKnown RBP15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 RBM17Q96I25 401 aaKnown RBP15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CCDC85AQ96PX6 553 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 BSDC1Q9NW68 430 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 CEP126Q9P2H0 1117 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 AKAP2Q9Y2D5 859 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 SALL3Q9BXA9 1300 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 ARAP2Q8WZ64 1704 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 ZNF609O15014 1411 aa15.09■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 RBBP6Q7Z6E9 1792 aaKnown RBP15.08■□□□□ 0.01
CACNA1C-IT3-201ENST00000542680 APBB1O00213 710 aa15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 PDE4AP27815 886 aa15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 LMOD1P29536 600 aaPredicted RBP15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 GRAPQ13588 217 aa15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 ZNF594Q96JF6 807 aaPredicted RBP15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 RNF186Q9NXI6 227 aa15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 PITPNM2Q9BZ72 1349 aa15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 LRRC37AA6NMS7 1700 aa15.08■□□□□ 0
CACNA1C-IT3-201ENST00000542680 UNC80Q8N2C7 3258 aa15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 SMARCA5O60264 1052 aaPredicted RBP15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 NPR1P16066 1061 aa15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 RPS8P62241 208 aaKnown RBP15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 PKN2Q16513 984 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms