RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 GORABQ5T7V8 394 aa5.41□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 GDF6Q6KF10 455 aaPredicted RBP5.41□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 FTSJ3Q8IY81 847 aaKnown RBP5.41□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 TMTC2Q8N394 836 aa5.41□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 VTI1AQ96AJ9 217 aa5.41□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 MUC3BQ9H195 1237 aa5.41□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.41□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 FAM196BA6NMK8 535 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 J3QW42 95 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 MARCH6O60337 910 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 LGR5O75473 907 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 BRD1O95696 1058 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 GLB1P16278 677 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 FAM43BQ6ZT52 329 aaPredicted RBP5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 ANKMY2Q8IV38 441 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 STOML1Q9UBI4 398 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 SERPINA10Q9UK55 444 aa5.4□□□□□ -1.54
CACNA1C-IT2-201ENST00000541871 DHX15O43143 795 aaKnown RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 TPD52L2O43399 206 aaKnown RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 MMP20O60882 483 aa5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 MED26O95402 600 aa5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 TAL1P17542 331 aaPredicted RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 WEE1P30291 646 aa5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 GP2P55259 537 aaKnown RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 KANK4Q5T7N3 995 aaPredicted RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 AGGF1Q8N302 714 aaeCLIP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 GLMNQ92990 594 aa5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 CCDC97Q96F63 343 aaPredicted RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 OAS3Q9Y6K5 1087 aaKnown RBP5.39□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ANKRD62A6NC57 917 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L15C9J2P7 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L10C9JJH3 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L13C9JLJ4 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L12C9JPN9 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L11C9JVI0 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L21D6R901 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L18D6R9N7 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L22D6RA61 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L17D6RBQ6 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L19D6RCP7 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L20D6RJB6 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 TGFB1P01137 390 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ERCC3P19447 782 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 GRIK1P39086 918 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 FAM193AP78312 1265 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP17L24Q0WX57 530 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 INTS5Q6P9B9 1019 aaKnown RBP5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 CMTR1Q8N1G2 835 aaKnown RBP5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 NSUN5Q96P11 429 aaKnown RBP5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 UBL7Q96S82 380 aaPredicted RBP5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 CEP41Q9BYV8 373 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 IGSF5Q9NSI5 407 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 USP20Q9Y2K6 914 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 PPME1Q9Y570 386 aa5.38□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 UVSSAQ2YD98 709 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 TREML1Q86YW5 311 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ZDHHC13Q8IUH4 622 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 RGL4Q8IZJ4 473 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 VRTNQ9H8Y1 702 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 LRFN2Q9ULH4 789 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 RNF114Q9Y508 228 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 KCNMB2Q9Y691 235 aa5.37□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 SPINK2P20155 84 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 NFIAQ12857 509 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ARMC10Q8N2F6 343 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 CLUAP1Q96AJ1 413 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 DRC1Q96MC2 740 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 PPP1R12CQ9BZL4 782 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 TERF2IPQ9NYB0 399 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 TRIM33Q9UPN9 1127 aa5.36□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 CLGNO14967 610 aa5.35□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 CD68P34810 354 aaPredicted RBP5.35□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 RALBP1Q15311 655 aa5.35□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 NLRP13Q86W25 1043 aa5.35□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 FAM9BQ8IZU0 186 aa5.35□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 GALNT11Q8NCW6 608 aa5.35□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ZNF622Q969S3 477 aaKnown RBP eCLIP5.35□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 LINC01387J3KSC0 135 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 RNF43Q68DV7 783 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ACAD11Q709F0 780 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 DTX1Q86Y01 620 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 FNBP4Q8N3X1 1017 aaPredicted RBP5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 UTP4Q969X6 686 aaKnown RBP5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 SGSM3Q96HU1 749 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 FAM46AQ96IP4 442 aaKnown RBP5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 SPACA7Q96KW9 195 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 DBNDD2Q9BQY9 259 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 HIRIP3Q9BW71 556 aaPredicted RBP5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 C7orf69Q9H7B7 122 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 KCNG1Q9UIX4 513 aa5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 ZNF777Q9ULD5 760 aaPredicted RBP5.34□□□□□ -1.55
CACNA1C-IT2-201ENST00000541871 UNCXA6NJT0 531 aa5.33□□□□□ -1.56
CACNA1C-IT2-201ENST00000541871 WISP1O95388 367 aa5.33□□□□□ -1.56
CACNA1C-IT2-201ENST00000541871 WNT11O96014 354 aa5.33□□□□□ -1.56
CACNA1C-IT2-201ENST00000541871 KCNA1Q09470 495 aa5.33□□□□□ -1.56
CACNA1C-IT2-201ENST00000541871 COX20Q5RI15 118 aa5.33□□□□□ -1.56
CACNA1C-IT2-201ENST00000541871 PROSER2Q86WR7 435 aaPredicted RBP5.33□□□□□ -1.56
CACNA1C-IT2-201ENST00000541871 TRIM42Q8IWZ5 723 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms