RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 PLD4Q96BZ4 506 aa9.85□□□□□ -0.83
C12orf56-204ENST00000541802 BCL2L13Q9BXK5 485 aa9.85□□□□□ -0.83
C12orf56-204ENST00000541802 SMG9Q9H0W8 520 aaKnown RBP9.85□□□□□ -0.83
C12orf56-204ENST00000541802 NPHS2Q9NP85 383 aa9.85□□□□□ -0.83
C12orf56-204ENST00000541802 ALBP02768 609 aa9.84□□□□□ -0.83
C12orf56-204ENST00000541802 SNRPNP63162 240 aaKnown RBP9.84□□□□□ -0.83
C12orf56-204ENST00000541802 ATP2B2Q01814 1243 aa9.84□□□□□ -0.83
C12orf56-204ENST00000541802 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
C12orf56-204ENST00000541802 PEAR1Q5VY43 1037 aaPredicted RBP9.84□□□□□ -0.83
C12orf56-204ENST00000541802 PI16Q6UXB8 463 aa9.84□□□□□ -0.83
C12orf56-204ENST00000541802 FBXO33Q7Z6M2 555 aa9.84□□□□□ -0.83
C12orf56-204ENST00000541802 FOXD4L4Q8WXT5 416 aaPredicted RBP9.84□□□□□ -0.83
C12orf56-204ENST00000541802 RASSF4Q9H2L5 321 aa9.84□□□□□ -0.83
C12orf56-204ENST00000541802 RRAGCQ9HB90 399 aa9.84□□□□□ -0.83
C12orf56-204ENST00000541802 M0R082 166 aa9.83□□□□□ -0.84
C12orf56-204ENST00000541802 RGS9O75916 674 aaPredicted RBP9.83□□□□□ -0.84
C12orf56-204ENST00000541802 C8orf86Q6ZUL3 223 aa9.83□□□□□ -0.84
C12orf56-204ENST00000541802 ALYREFQ86V81 257 aaKnown RBP9.83□□□□□ -0.84
C12orf56-204ENST00000541802 ZNF417Q8TAU3 575 aa9.83□□□□□ -0.84
C12orf56-204ENST00000541802 ZNF587Q96SQ5 575 aaPredicted RBP9.83□□□□□ -0.84
C12orf56-204ENST00000541802 OSMRQ99650 979 aa9.83□□□□□ -0.84
C12orf56-204ENST00000541802 LPIN3Q9BQK8 851 aa9.83□□□□□ -0.84
C12orf56-204ENST00000541802 ZKSCAN3Q9BRR0 538 aa9.83□□□□□ -0.84
C12orf56-204ENST00000541802 JPH1Q9HDC5 661 aaPredicted RBP9.83□□□□□ -0.84
C12orf56-204ENST00000541802 GADD45BO75293 160 aaPredicted RBP9.82□□□□□ -0.84
C12orf56-204ENST00000541802 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.82□□□□□ -0.84
C12orf56-204ENST00000541802 ALG1LQ6GMV1 187 aa9.82□□□□□ -0.84
C12orf56-204ENST00000541802 C20orf204Q6ZNR8 217 aa9.82□□□□□ -0.84
C12orf56-204ENST00000541802 PBX4Q9BYU1 374 aa9.82□□□□□ -0.84
C12orf56-204ENST00000541802 DZANK1Q9NVP4 752 aa9.82□□□□□ -0.84
C12orf56-204ENST00000541802 A0A1W2PP55 124 aa9.81□□□□□ -0.84
C12orf56-204ENST00000541802 CEP135Q66GS9 1140 aa9.81□□□□□ -0.84
C12orf56-204ENST00000541802 GIPC2Q8TF65 315 aa9.81□□□□□ -0.84
C12orf56-204ENST00000541802 HHIPQ96QV1 700 aa9.81□□□□□ -0.84
C12orf56-204ENST00000541802 NLRP2Q9NX02 1062 aa9.81□□□□□ -0.84
C12orf56-204ENST00000541802 FRRS1LQ9P0K9 344 aa9.81□□□□□ -0.84
C12orf56-204ENST00000541802 MKL2Q9ULH7 1088 aa9.81□□□□□ -0.84
C12orf56-204ENST00000541802 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
C12orf56-204ENST00000541802 DUSP9Q99956 384 aaKnown RBP9.8□□□□□ -0.84
C12orf56-204ENST00000541802 RNF19AQ9NV58 838 aa9.8□□□□□ -0.84
C12orf56-204ENST00000541802 NFKBIEO00221 500 aa9.79□□□□□ -0.84
C12orf56-204ENST00000541802 LILRB5O75023 590 aa9.79□□□□□ -0.84
C12orf56-204ENST00000541802 PRPF40AO75400 957 aaKnown RBP9.79□□□□□ -0.84
C12orf56-204ENST00000541802 SMNDC1O75940 238 aaKnown RBP eCLIP9.79□□□□□ -0.84
C12orf56-204ENST00000541802 COL8A1P27658 744 aa9.79□□□□□ -0.84
C12orf56-204ENST00000541802 FBF1Q8TES7 1133 aa9.79□□□□□ -0.84
C12orf56-204ENST00000541802 POP1Q99575 1024 aaKnown RBP9.79□□□□□ -0.84
C12orf56-204ENST00000541802 EHD4Q9H223 541 aa9.79□□□□□ -0.84
C12orf56-204ENST00000541802 TRIM33Q9UPN9 1127 aa9.79□□□□□ -0.84
C12orf56-204ENST00000541802 PDE2AO00408 941 aaPredicted RBP9.78□□□□□ -0.84
C12orf56-204ENST00000541802 HOXB4P17483 251 aaPredicted RBP9.78□□□□□ -0.84
C12orf56-204ENST00000541802 AFF1P51825 1210 aaKnown RBP9.78□□□□□ -0.84
C12orf56-204ENST00000541802 KIAA0319Q5VV43 1072 aa9.78□□□□□ -0.84
C12orf56-204ENST00000541802 LACRTQ9GZZ8 138 aa9.78□□□□□ -0.84
C12orf56-204ENST00000541802 DGKGP49619 791 aa9.77□□□□□ -0.85
C12orf56-204ENST00000541802 ADAMTSL4Q6UY14 1074 aa9.77□□□□□ -0.85
C12orf56-204ENST00000541802 TTC9Q92623 222 aa9.77□□□□□ -0.85
C12orf56-204ENST00000541802 NXPE3Q969Y0 559 aa9.77□□□□□ -0.85
C12orf56-204ENST00000541802 LIN7BQ9HAP6 207 aa9.77□□□□□ -0.85
C12orf56-204ENST00000541802 PARP2Q9UGN5 583 aa9.77□□□□□ -0.85
C12orf56-204ENST00000541802 FGD1P98174 961 aa9.76□□□□□ -0.85
C12orf56-204ENST00000541802 GRM2Q14416 872 aa9.76□□□□□ -0.85
C12orf56-204ENST00000541802 GRIK5Q16478 980 aa9.76□□□□□ -0.85
C12orf56-204ENST00000541802 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
C12orf56-204ENST00000541802 TMEM102Q8N9M5 508 aaPredicted RBP9.76□□□□□ -0.85
C12orf56-204ENST00000541802 ASAP3Q8TDY4 903 aa9.76□□□□□ -0.85
C12orf56-204ENST00000541802 BCO2Q9BYV7 579 aa9.76□□□□□ -0.85
C12orf56-204ENST00000541802 SUV39H2Q9H5I1 410 aa9.76□□□□□ -0.85
C12orf56-204ENST00000541802 METTL12A8MUP2 240 aa9.75□□□□□ -0.85
C12orf56-204ENST00000541802 ZNF16P17020 682 aaPredicted RBP9.75□□□□□ -0.85
C12orf56-204ENST00000541802 NXPE4Q6UWF7 544 aa9.75□□□□□ -0.85
C12orf56-204ENST00000541802 FAM161BQ96MY7 647 aa9.75□□□□□ -0.85
C12orf56-204ENST00000541802 TCF12Q99081 682 aa9.75□□□□□ -0.85
C12orf56-204ENST00000541802 XPCQ01831 940 aaPredicted RBP9.74□□□□□ -0.85
C12orf56-204ENST00000541802 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
C12orf56-204ENST00000541802 IL22RA1Q8N6P7 574 aa9.74□□□□□ -0.85
C12orf56-204ENST00000541802 OSBPL7Q9BZF2 842 aa9.74□□□□□ -0.85
C12orf56-204ENST00000541802 SH2B1Q9NRF2 756 aaPredicted RBP9.74□□□□□ -0.85
C12orf56-204ENST00000541802 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
C12orf56-204ENST00000541802 RBM47A0AV96 593 aaKnown RBP9.73□□□□□ -0.85
C12orf56-204ENST00000541802 PTPRAP18433 802 aa9.73□□□□□ -0.85
C12orf56-204ENST00000541802 GNA15P30679 374 aa9.73□□□□□ -0.85
C12orf56-204ENST00000541802 COL9A3Q14050 684 aaPredicted RBP9.73□□□□□ -0.85
C12orf56-204ENST00000541802 SPRED3Q2MJR0 410 aa9.73□□□□□ -0.85
C12orf56-204ENST00000541802 LCE3BQ5TA77 95 aa9.73□□□□□ -0.85
C12orf56-204ENST00000541802 LINC00114Q6XXX2 140 aa9.73□□□□□ -0.85
C12orf56-204ENST00000541802 BHLHE41Q9C0J9 482 aaPredicted RBP9.73□□□□□ -0.85
C12orf56-204ENST00000541802 PRDM6Q9NQX0 595 aa9.73□□□□□ -0.85
C12orf56-204ENST00000541802 CDC25BP30305 580 aa9.72□□□□□ -0.85
C12orf56-204ENST00000541802 GRIA4P48058 902 aa9.72□□□□□ -0.85
C12orf56-204ENST00000541802 PSMD2Q13200 908 aa9.72□□□□□ -0.85
C12orf56-204ENST00000541802 GLIS3Q8NEA6 775 aa9.72□□□□□ -0.85
C12orf56-204ENST00000541802 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
C12orf56-204ENST00000541802 C1QTNF9BB2RNN3 333 aa9.71□□□□□ -0.86
C12orf56-204ENST00000541802 NID1P14543 1247 aa9.71□□□□□ -0.86
C12orf56-204ENST00000541802 ITGB7P26010 798 aa9.71□□□□□ -0.86
C12orf56-204ENST00000541802 CDC27P30260 824 aa9.71□□□□□ -0.86
C12orf56-204ENST00000541802 MSL1Q68DK7 614 aa9.71□□□□□ -0.86
C12orf56-204ENST00000541802 WFDC8Q8IUA0 241 aa9.71□□□□□ -0.86
C12orf56-204ENST00000541802 DMRTC2Q8IXT2 367 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms