RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
PHACTR3-209ENST00000541461 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
PHACTR3-209ENST00000541461 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
PHACTR3-209ENST00000541461 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
PHACTR3-209ENST00000541461 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
PHACTR3-209ENST00000541461 UTYO14607 1347 aa12.41□□□□□ -0.42
PHACTR3-209ENST00000541461 IGKV5-2P06315 115 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 TNNT1P13805 278 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 TSGA10IPQ3SY00 556 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 EPHA10Q5JZY3 1008 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 CCDC129Q6ZRS4 1044 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 Q6ZUG5 572 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 SEPT12Q8IYM1 358 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 ACSBG1Q96GR2 724 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 HMG20BQ9P0W2 317 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 NCBP1Q09161 790 aaKnown RBP12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 LRRC2Q9BYS8 371 aa12.4□□□□□ -0.42
PHACTR3-209ENST00000541461 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.43
PHACTR3-209ENST00000541461 H3BQV1 296 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 FOSBP53539 338 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 HEG1Q9ULI3 1381 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 SMTNL1A8MU46 457 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 PDIA6Q15084 440 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 TPD52L1Q16890 204 aaPredicted RBP12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 USPL1Q5W0Q7 1092 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 ADAMTS7Q9UKP4 1686 aa12.39□□□□□ -0.43
PHACTR3-209ENST00000541461 DDX58O95786 925 aaKnown RBP12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 BRD2P25440 801 aaKnown RBP12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 RXRBP28702 533 aa12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 C11orf57Q6ZUT1 292 aaPredicted RBP12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 FTOQ9C0B1 505 aaKnown RBP eCLIP12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 SIPA1L3O60292 1781 aaPredicted RBP12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 A0A087WWV3 80 aa12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 MYL6BP14649 208 aa12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 KRT32Q14532 448 aa12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 IQCB1Q15051 598 aa12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
PHACTR3-209ENST00000541461 CYP21A2P08686 494 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 FGD1P98174 961 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 SCRN1Q12765 414 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 DNAJC2Q99543 621 aaKnown RBP12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 NEURL1BA8MQ27 555 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 ADD1P35611 737 aaKnown RBP12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 TFCP2Q12800 502 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 ZNF790Q6PG37 636 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 GTPBP4Q9BZE4 634 aaKnown RBP12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 CFAP45Q9UL16 551 aa12.37□□□□□ -0.43
PHACTR3-209ENST00000541461 THSD7AQ9UPZ6 1657 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 USP27XA6NNY8 438 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 GOLGA6L19H0YKK7 550 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 KCNQ2O43526 872 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 IGSF3O75054 1194 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 PPFIA3O75145 1194 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 ATP5JP18859 108 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 GCKRQ14397 625 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 PTF1AQ7RTS3 328 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 LRRC8AQ8IWT6 810 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 CCAR1Q8IX12 1150 aaKnown RBP12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 PIGBQ92521 554 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 MYD88Q99836 296 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 GOLPH3LQ9H4A5 285 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 ZNF609O15014 1411 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 ITGB4P16144 1822 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 PTCD1O75127 700 aaKnown RBP12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 CDC25BP30305 580 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 TNNI3KQ59H18 835 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 CCDC112Q8NEF3 446 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 XAGE3Q8WTP9 111 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 TMOD3Q9NYL9 352 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 FPGT-TNNI3KV9GXZ4 949 aa12.36□□□□□ -0.43
PHACTR3-209ENST00000541461 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
PHACTR3-209ENST00000541461 SLFNL1Q499Z3 407 aa12.35□□□□□ -0.43
PHACTR3-209ENST00000541461 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
PHACTR3-209ENST00000541461 ZNF496Q96IT1 587 aaPredicted RBP12.35□□□□□ -0.43
PHACTR3-209ENST00000541461 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
PHACTR3-209ENST00000541461 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
PHACTR3-209ENST00000541461 DOT1LQ8TEK3 1739 aa12.35□□□□□ -0.43
PHACTR3-209ENST00000541461 CTDNEP1O95476 244 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms