RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TNPO1Q92973 898 aaKnown RBP17.32■□□□□ 0.36
HMGA2-210ENST00000541363 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
HMGA2-210ENST00000541363 TUBBP07437 444 aa17.32■□□□□ 0.36
HMGA2-210ENST00000541363 MICU3Q86XE3 530 aa17.32■□□□□ 0.36
HMGA2-210ENST00000541363 ORC3Q9UBD5 711 aaPredicted RBP17.32■□□□□ 0.36
HMGA2-210ENST00000541363 SMARCA5O60264 1052 aaPredicted RBP17.32■□□□□ 0.36
HMGA2-210ENST00000541363 GABPAQ06546 454 aa17.32■□□□□ 0.36
HMGA2-210ENST00000541363 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
HMGA2-210ENST00000541363 SYT1P21579 422 aa17.32■□□□□ 0.36
HMGA2-210ENST00000541363 KCNG4Q8TDN1 519 aa17.32■□□□□ 0.36
HMGA2-210ENST00000541363 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
HMGA2-210ENST00000541363 BIRC2Q13490 618 aa17.31■□□□□ 0.36
HMGA2-210ENST00000541363 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
HMGA2-210ENST00000541363 CCDC42Q96M95 316 aa17.31■□□□□ 0.36
HMGA2-210ENST00000541363 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
HMGA2-210ENST00000541363 ANO6Q4KMQ2 910 aa17.31■□□□□ 0.36
HMGA2-210ENST00000541363 GSDMBQ8TAX9 411 aa17.31■□□□□ 0.36
HMGA2-210ENST00000541363 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
HMGA2-210ENST00000541363 HAUS8Q9BT25 410 aa17.31■□□□□ 0.36
HMGA2-210ENST00000541363 TXNDC9O14530 226 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 TSPY3P0CV98 308 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 TSPY8P0CW00 308 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 C6orf50Q9HD87 102 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 PSPC1Q8WXF1 523 aaKnown RBP17.3■□□□□ 0.36
HMGA2-210ENST00000541363 KIFAP3Q92845 792 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 BCAP29Q9UHQ4 241 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 UTP11Q9Y3A2 253 aaKnown RBP17.3■□□□□ 0.36
HMGA2-210ENST00000541363 ASIC1P78348 528 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 IFIT1BQ5T764 474 aaKnown RBP17.3■□□□□ 0.36
HMGA2-210ENST00000541363 MIER3Q7Z3K6 550 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 CRNKL1Q9BZJ0 848 aaKnown RBP17.3■□□□□ 0.36
HMGA2-210ENST00000541363 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
HMGA2-210ENST00000541363 NOC2LQ9Y3T9 749 aaKnown RBP17.3■□□□□ 0.36
HMGA2-210ENST00000541363 UBXN1Q04323 297 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 SLC8A3P57103 927 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 MCM10Q7L590 875 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 ARHGAP5Q13017 1502 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 ATP6V1E1P36543 226 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 CALM1P0DP23 149 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 CALM2P0DP24 149 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 CALM3P0DP25 149 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
HMGA2-210ENST00000541363 PTPRGP23470 1445 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 KRT23Q9C075 422 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 IRX4P78413 519 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 NOLC1Q14978 699 aaKnown RBP eCLIP17.28■□□□□ 0.36
HMGA2-210ENST00000541363 TAOK1Q7L7X3 1001 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 RNF10Q8N5U6 811 aaKnown RBP17.28■□□□□ 0.36
HMGA2-210ENST00000541363 CCDC8Q9H0W5 538 aaPredicted RBP17.28■□□□□ 0.36
HMGA2-210ENST00000541363 TRMT112Q9UI30 125 aaKnown RBP17.28■□□□□ 0.36
HMGA2-210ENST00000541363 WTAPQ15007 396 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 HEATR3Q7Z4Q2 680 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
HMGA2-210ENST00000541363 NEK1Q96PY6 1258 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 I3L4J1 428 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 GUCA1BQ9UMX6 200 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 AFAP1L1Q8TED9 768 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 ZBTB17Q13105 803 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
HMGA2-210ENST00000541363 MCM7P33993 719 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 SH3BGRP55822 239 aaPredicted RBP17.27■□□□□ 0.36
HMGA2-210ENST00000541363 DUSP27Q5VZP5 1158 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 CDC5LQ99459 802 aaKnown RBP17.27■□□□□ 0.36
HMGA2-210ENST00000541363 RHOXF2BP0C7M4 288 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 CCDC38Q502W7 563 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 RHOXF2Q9BQY4 288 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 SLC4A8Q2Y0W8 1093 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 KMT5BQ4FZB7 885 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 RNF34Q969K3 372 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 RBM27Q9P2N5 1060 aaKnown RBP17.27■□□□□ 0.36
HMGA2-210ENST00000541363 A6NNZ2 444 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 TUBB8Q3ZCM7 444 aa17.27■□□□□ 0.36
HMGA2-210ENST00000541363 DAPK3O43293 454 aa17.27■□□□□ 0.35
HMGA2-210ENST00000541363 ZNF569Q5MCW4 686 aa17.27■□□□□ 0.35
HMGA2-210ENST00000541363 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.35
HMGA2-210ENST00000541363 RUFY3Q7L099 469 aa17.27■□□□□ 0.35
HMGA2-210ENST00000541363 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
HMGA2-210ENST00000541363 KRT5P13647 590 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 TMTC2Q8N394 836 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 HS2ST1Q7LGA3 356 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 SMIM24O75264 130 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 HPDP32754 393 aaPredicted RBP17.26■□□□□ 0.35
HMGA2-210ENST00000541363 ZMAT2Q96NC0 199 aaKnown RBP17.26■□□□□ 0.35
HMGA2-210ENST00000541363 ACTN4O43707 911 aaKnown RBP17.26■□□□□ 0.35
HMGA2-210ENST00000541363 STX10O60499 249 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 FRMD4BQ9Y2L6 1034 aa17.26■□□□□ 0.35
HMGA2-210ENST00000541363 IRX5P78411 483 aaPredicted RBP17.25■□□□□ 0.35
HMGA2-210ENST00000541363 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
HMGA2-210ENST00000541363 ZNF365Q70YC5 407 aa17.25■□□□□ 0.35
HMGA2-210ENST00000541363 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
HMGA2-210ENST00000541363 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
HMGA2-210ENST00000541363 GBP5Q96PP8 586 aa17.25■□□□□ 0.35
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