RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GJA8P48165 433 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 UBXN2AP68543 259 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
YBX3-211ENST00000541351 NBPF9Q3BBW0 867 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 SUPT20HL1Q3ZLR7 823 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 SH3TC2Q8TF17 1288 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 GMLQ99445 158 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 MTMR10Q9NXD2 777 aa12.53□□□□□ -0.4
YBX3-211ENST00000541351 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
YBX3-211ENST00000541351 FARP2O94887 1054 aaPredicted RBP12.52□□□□□ -0.41
YBX3-211ENST00000541351 COL9A1P20849 921 aa12.52□□□□□ -0.41
YBX3-211ENST00000541351 MCM10Q7L590 875 aa12.52□□□□□ -0.41
YBX3-211ENST00000541351 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.41
YBX3-211ENST00000541351 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
YBX3-211ENST00000541351 RPS8P62241 208 aaKnown RBP12.51□□□□□ -0.41
YBX3-211ENST00000541351 SF3B3Q15393 1217 aaKnown RBP12.51□□□□□ -0.41
YBX3-211ENST00000541351 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
YBX3-211ENST00000541351 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
YBX3-211ENST00000541351 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
YBX3-211ENST00000541351 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
YBX3-211ENST00000541351 STAP2Q9UGK3 403 aa12.51□□□□□ -0.41
YBX3-211ENST00000541351 SCAF8Q9UPN6 1271 aaKnown RBP12.51□□□□□ -0.41
YBX3-211ENST00000541351 NEFMP07197 916 aa12.5□□□□□ -0.41
YBX3-211ENST00000541351 UBE2Q1Q7Z7E8 422 aa12.5□□□□□ -0.41
YBX3-211ENST00000541351 CELF1Q92879 486 aaKnown RBP12.5□□□□□ -0.41
YBX3-211ENST00000541351 NUDCQ9Y266 331 aa12.5□□□□□ -0.41
YBX3-211ENST00000541351 RPTORQ8N122 1335 aa12.5□□□□□ -0.41
YBX3-211ENST00000541351 ZNF646O15015 1829 aaPredicted RBP12.49□□□□□ -0.41
YBX3-211ENST00000541351 MYO1BO43795 1136 aa12.49□□□□□ -0.41
YBX3-211ENST00000541351 GTF2A2P52657 109 aa12.49□□□□□ -0.41
YBX3-211ENST00000541351 RAET1EQ8TD07 263 aa12.49□□□□□ -0.41
YBX3-211ENST00000541351 FAM122AQ96E09 287 aa12.49□□□□□ -0.41
YBX3-211ENST00000541351 TRIM47Q96LD4 638 aa12.49□□□□□ -0.41
YBX3-211ENST00000541351 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
YBX3-211ENST00000541351 RNF208Q9H0X6 261 aa12.49□□□□□ -0.41
YBX3-211ENST00000541351 BIN2Q9UBW5 565 aaPredicted RBP12.49□□□□□ -0.41
YBX3-211ENST00000541351 GRK4P32298 578 aa12.48□□□□□ -0.41
YBX3-211ENST00000541351 LACTBP83111 547 aaPredicted RBP12.48□□□□□ -0.41
YBX3-211ENST00000541351 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
YBX3-211ENST00000541351 Q7L0L9 218 aa12.48□□□□□ -0.41
YBX3-211ENST00000541351 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
YBX3-211ENST00000541351 DEFB129Q9H1M3 183 aa12.48□□□□□ -0.41
YBX3-211ENST00000541351 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
YBX3-211ENST00000541351 TAF1P21675 1872 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 CCL5P13501 91 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 PLA2G5P39877 138 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 MTFR1Q15390 333 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 STRIP1Q5VSL9 837 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 TDHQ8IZJ6 230 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 CLMNQ96JQ2 1002 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 LAMB1P07942 1786 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 LAMB2P55268 1798 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 LAMA3Q16787 3333 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
YBX3-211ENST00000541351 UNC80Q8N2C7 3258 aa12.46□□□□□ -0.41
YBX3-211ENST00000541351 XDHP47989 1333 aa12.46□□□□□ -0.41
YBX3-211ENST00000541351 TLR2O60603 784 aa12.46□□□□□ -0.41
YBX3-211ENST00000541351 ATP2B4P23634 1241 aa12.46□□□□□ -0.41
YBX3-211ENST00000541351 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
YBX3-211ENST00000541351 U2AF1L4Q8WU68 220 aaKnown RBP12.46□□□□□ -0.41
YBX3-211ENST00000541351 FBXW7Q969H0 707 aa12.46□□□□□ -0.41
YBX3-211ENST00000541351 PTPN18Q99952 460 aa12.46□□□□□ -0.41
YBX3-211ENST00000541351 GDF15Q99988 308 aa12.46□□□□□ -0.41
YBX3-211ENST00000541351 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
YBX3-211ENST00000541351 SASH1O94885 1247 aa12.45□□□□□ -0.42
YBX3-211ENST00000541351 CCL15Q16663 113 aa12.45□□□□□ -0.42
YBX3-211ENST00000541351 FAM109BQ6ICB4 259 aaPredicted RBP12.45□□□□□ -0.42
YBX3-211ENST00000541351 OPTNQ96CV9 577 aa12.45□□□□□ -0.42
YBX3-211ENST00000541351 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
YBX3-211ENST00000541351 SRRDQ9UH36 339 aa12.45□□□□□ -0.42
YBX3-211ENST00000541351 RIPOR2Q9Y4F9 1068 aa12.45□□□□□ -0.42
YBX3-211ENST00000541351 PSME4Q14997 1843 aa12.44□□□□□ -0.42
YBX3-211ENST00000541351 FAM205AQ6ZU69 1335 aa12.44□□□□□ -0.42
YBX3-211ENST00000541351 SGPL1O95470 568 aa12.44□□□□□ -0.42
YBX3-211ENST00000541351 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
YBX3-211ENST00000541351 DLGAP5Q15398 846 aa12.44□□□□□ -0.42
YBX3-211ENST00000541351 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
YBX3-211ENST00000541351 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
YBX3-211ENST00000541351 TFRCP02786 760 aaKnown RBP12.43□□□□□ -0.42
YBX3-211ENST00000541351 BCAMP50895 628 aa12.43□□□□□ -0.42
YBX3-211ENST00000541351 CAP1Q01518 475 aa12.43□□□□□ -0.42
YBX3-211ENST00000541351 TNFAIP1Q13829 316 aa12.43□□□□□ -0.42
YBX3-211ENST00000541351 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
YBX3-211ENST00000541351 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
YBX3-211ENST00000541351 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
YBX3-211ENST00000541351 ZNF804BA4D1E1 1349 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 IRS2Q9Y4H2 1338 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
YBX3-211ENST00000541351 CETPP11597 493 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 CCDC152Q4G0S7 254 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 UBE2OQ9C0C9 1292 aaKnown RBP12.42□□□□□ -0.42
YBX3-211ENST00000541351 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 CSADQ9Y600 493 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
YBX3-211ENST00000541351 MYPNQ86TC9 1320 aa12.41□□□□□ -0.42
YBX3-211ENST00000541351 COL3A1P02461 1466 aaPredicted RBP12.41□□□□□ -0.42
YBX3-211ENST00000541351 U2AF1L5P0DN76 240 aaPredicted RBP12.41□□□□□ -0.42
YBX3-211ENST00000541351 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms