RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 HOMER3Q9NSC5 361 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 DDX20Q9UHI6 824 aaKnown RBP8.52□□□□□ -1.05
PPME1-206ENST00000541340 CAPN7Q9Y6W3 813 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 PLA2R1Q13018 1463 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 FANCGO15287 622 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 MAP3K9P80192 1104 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 LONRF2Q1L5Z9 754 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 INTS3Q68E01 1043 aaKnown RBP8.52□□□□□ -1.05
PPME1-206ENST00000541340 RCSD1Q6JBY9 416 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 BICD2Q8TD16 824 aa8.52□□□□□ -1.05
PPME1-206ENST00000541340 SPDYE3A6NKU9 549 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 CCZ1BP86790 482 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 CCZ1P86791 482 aaPredicted RBP8.51□□□□□ -1.05
PPME1-206ENST00000541340 KIAA0825Q8IV33 1275 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 TMEM87AQ8NBN3 555 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 IL25Q9H293 177 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.51□□□□□ -1.05
PPME1-206ENST00000541340 SLC8A3P57103 927 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 EVCP57679 992 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 UBE2HP62256 183 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 ACTN3Q08043 901 aaPredicted RBP8.51□□□□□ -1.05
PPME1-206ENST00000541340 CUL4AQ13619 759 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 IQCB1Q15051 598 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 TDRD7Q8NHU6 1098 aaKnown RBP8.51□□□□□ -1.05
PPME1-206ENST00000541340 GCC1Q96CN9 775 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 TRIM35Q9UPQ4 493 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 CCDC141Q6ZP82 1450 aa8.51□□□□□ -1.05
PPME1-206ENST00000541340 PRG4Q92954 1404 aaPredicted RBP8.51□□□□□ -1.05
PPME1-206ENST00000541340 ZEB2O60315 1214 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 CCDC192P0DO97 292 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 TYRO3Q06418 890 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 KIAA1328Q86T90 577 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 TCP11Q8WWU5 503 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 NEMFO60524 1076 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 KRT24Q2M2I5 525 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 MAB21L3Q8N8X9 362 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 FAM81AQ8TBF8 368 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 FBXO41Q8TF61 875 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 DNAJC25Q9H1X3 360 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 MMADHCQ9H3L0 296 aaPredicted RBP8.5□□□□□ -1.05
PPME1-206ENST00000541340 ACBD3Q9H3P7 528 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 SHPRHQ149N8 1683 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 CPA1P15085 419 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 ZNF24P17028 368 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 TTLL7Q6ZT98 887 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
PPME1-206ENST00000541340 C17orf50Q8WW18 174 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 MIS18AQ9NYP9 233 aa8.5□□□□□ -1.05
PPME1-206ENST00000541340 CCT5P48643 541 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 SFMBT2Q5VUG0 894 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 ZNF280DQ6N043 979 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 TSPYL6Q8N831 410 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 AGAP3Q96P47 875 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 UTP14AQ9BVJ6 771 aaKnown RBP8.49□□□□□ -1.05
PPME1-206ENST00000541340 CARD6Q9BX69 1037 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 PARD6BQ9BYG5 372 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 PHACTR1Q9C0D0 580 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 RGL1Q9NZL6 768 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 ABCA8O94911 1581 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 MYOM1P52179 1685 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 SYT1P21579 422 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 SCNN1BP51168 640 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 TMEM62Q0P6H9 643 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 NEXNQ0ZGT2 675 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 CDC37Q16543 378 aaPredicted RBP8.49□□□□□ -1.05
PPME1-206ENST00000541340 DBN1Q16643 649 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 CD109Q6YHK3 1445 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 JPH4Q96JJ6 628 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 FILIP1LQ4L180 1135 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 RRP12Q5JTH9 1297 aaKnown RBP8.49□□□□□ -1.05
PPME1-206ENST00000541340 FERMT3Q86UX7 667 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 FBXW7Q969H0 707 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 PRAM1Q96QH2 718 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 POLR3AO14802 1390 aaPredicted RBP8.49□□□□□ -1.05
PPME1-206ENST00000541340 LAMC1P11047 1609 aa8.49□□□□□ -1.05
PPME1-206ENST00000541340 LRRC10BA6NIK2 292 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 EBAG9O00559 213 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 CEP57Q86XR8 500 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 PPP1R13BQ96KQ4 1090 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 STK31Q9BXU1 1019 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 FAM204AQ9H8W3 233 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 ATP6V0A4Q9HBG4 840 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 MYO6Q9UM54 1294 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 MAPK8IP1Q9UQF2 711 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.48□□□□□ -1.05
PPME1-206ENST00000541340 PCDHGC5Q9Y5F6 944 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 ALKQ9UM73 1620 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 WDR33Q9C0J8 1336 aaKnown RBP8.48□□□□□ -1.05
PPME1-206ENST00000541340 CCDC69A6NI79 296 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 ATP6V1G1O75348 118 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 FESP07332 822 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 CDC25BP30305 580 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 CEP85LQ5SZL2 805 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 CCDC181Q5TID7 509 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 NME8Q8N427 588 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 KLC4Q9NSK0 619 aa8.48□□□□□ -1.05
PPME1-206ENST00000541340 SHANK2Q9UPX8 1470 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms