RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
CNOT4-212ENST00000541284 BRF1Q92994 677 aa11.3□□□□□ -0.6
CNOT4-212ENST00000541284 FOXP2O15409 715 aa11.3□□□□□ -0.6
CNOT4-212ENST00000541284 SNRPA1P09661 255 aaKnown RBP11.3□□□□□ -0.6
CNOT4-212ENST00000541284 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-212ENST00000541284 IFNL2Q8IZJ0 200 aa11.3□□□□□ -0.6
CNOT4-212ENST00000541284 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
CNOT4-212ENST00000541284 SCAND2PQ9GZW5 306 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-212ENST00000541284 QSER1Q2KHR3 1735 aa11.3□□□□□ -0.6
CNOT4-212ENST00000541284 H7C1W4 665 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 NEXNQ0ZGT2 675 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 CKAP2LQ8IYA6 745 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
CNOT4-212ENST00000541284 ATP5J2-PTCD1G3V325 749 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 PFKFB2O60825 505 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
CNOT4-212ENST00000541284 MCMDC2Q4G0Z9 681 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 ANO6Q4KMQ2 910 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 KBTBD3Q8NAB2 608 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 DDX11Q96FC9 970 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 SPATA32Q96LK8 384 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 KRT32Q14532 448 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 DDX46Q7L014 1031 aaKnown RBP11.29□□□□□ -0.6
CNOT4-212ENST00000541284 MAP7D2Q96T17 732 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 CHMP3Q9Y3E7 222 aa11.29□□□□□ -0.6
CNOT4-212ENST00000541284 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-212ENST00000541284 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
CNOT4-212ENST00000541284 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 LRRC2Q9BYS8 371 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 DDX19AQ9NUU7 478 aaKnown RBP11.28□□□□□ -0.6
CNOT4-212ENST00000541284 PTGS1P23219 599 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 PLBD2Q8NHP8 589 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 RAPGEF4Q8WZA2 1011 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 FTOQ9C0B1 505 aaKnown RBP eCLIP11.28□□□□□ -0.6
CNOT4-212ENST00000541284 GOLPH3LQ9H4A5 285 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 NRBP1Q9UHY1 535 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-212ENST00000541284 IQCB1Q15051 598 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
CNOT4-212ENST00000541284 NEDD4P46934 1319 aa11.27□□□□□ -0.6
CNOT4-212ENST00000541284 A0A087WZG4 1122 aa11.27□□□□□ -0.6
CNOT4-212ENST00000541284 ZNF75DP51815 510 aa11.27□□□□□ -0.6
CNOT4-212ENST00000541284 SNW1Q13573 536 aaKnown RBP11.27□□□□□ -0.6
CNOT4-212ENST00000541284 SPC24Q8NBT2 197 aa11.27□□□□□ -0.6
CNOT4-212ENST00000541284 TNMDQ9H2S6 317 aa11.27□□□□□ -0.6
CNOT4-212ENST00000541284 NLRP2Q9NX02 1062 aa11.27□□□□□ -0.6
CNOT4-212ENST00000541284 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
CNOT4-212ENST00000541284 ZMYM1Q5SVZ6 1142 aa11.27□□□□□ -0.61
CNOT4-212ENST00000541284 LMBR1LQ6UX01 489 aa11.27□□□□□ -0.61
CNOT4-212ENST00000541284 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
CNOT4-212ENST00000541284 FOCADQ5VW36 1801 aa11.27□□□□□ -0.61
CNOT4-212ENST00000541284 LAMB1P07942 1786 aa11.27□□□□□ -0.61
CNOT4-212ENST00000541284 ENGASEQ8NFI3 743 aa11.27□□□□□ -0.61
CNOT4-212ENST00000541284 FMNL2Q96PY5 1086 aa11.27□□□□□ -0.61
CNOT4-212ENST00000541284 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
CNOT4-212ENST00000541284 LRMPQ12912 555 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 LLPHQ9BRT6 129 aaKnown RBP11.26□□□□□ -0.61
CNOT4-212ENST00000541284 DSCC1Q9BVC3 393 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 GPR108Q9NPR9 543 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 RCOR1Q9UKL0 485 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 MAST3O60307 1309 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 CCDC144BQ3MJ40 725 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 GLIPR1L2Q4G1C9 344 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 C11orf57Q6ZUT1 292 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-212ENST00000541284 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
CNOT4-212ENST00000541284 CTIFO43310 598 aaKnown RBP11.26□□□□□ -0.61
CNOT4-212ENST00000541284 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-212ENST00000541284 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
CNOT4-212ENST00000541284 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
CNOT4-212ENST00000541284 FBXL16Q8N461 479 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 DNAJC25Q9H1X3 360 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 HELLSQ9NRZ9 838 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 TPM3P06753 285 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 EVCP57679 992 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 APOBRQ0VD83 1088 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 LRRC24Q50LG9 513 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 ZSCAN16Q9H4T2 348 aaPredicted RBP11.25□□□□□ -0.61
CNOT4-212ENST00000541284 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 M0R2C6 588 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
CNOT4-212ENST00000541284 TIMM10P62072 90 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 TICAM2Q86XR7 235 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 PAG1Q9NWQ8 432 aa11.25□□□□□ -0.61
CNOT4-212ENST00000541284 PTPDC1A2A3K4 754 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 E7EWF7 191 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
CNOT4-212ENST00000541284 CHRNA2Q15822 529 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 ZSCAN25Q6NSZ9 544 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 CCDC186Q7Z3E2 898 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 ANKRD7Q92527 254 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 GOLIM4O00461 696 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 PLCB2Q00722 1185 aa11.24□□□□□ -0.61
CNOT4-212ENST00000541284 SARM1Q6SZW1 724 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms