RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 TPM3P06753 285 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
TTC39C-203ENST00000540918 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
TTC39C-203ENST00000540918 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 ZNF532Q9HCE3 1301 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 JAK2O60674 1132 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 CHGBP05060 677 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 TSPY3P0CV98 308 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 TSPY8P0CW00 308 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 SYT1P21579 422 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 HIBADHP31937 336 aaKnown RBP11.12□□□□□ -0.63
TTC39C-203ENST00000540918 TCP10Q12799 353 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 ADCK5Q3MIX3 580 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 CCDC47Q96A33 483 aaKnown RBP11.12□□□□□ -0.63
TTC39C-203ENST00000540918 RNF41Q9H4P4 317 aaPredicted RBP11.12□□□□□ -0.63
TTC39C-203ENST00000540918 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
TTC39C-203ENST00000540918 SASH1O94885 1247 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 ZFYP08048 801 aaPredicted RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 NYXQ9GZU5 481 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 KDRP35968 1356 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 LDHBP07195 334 aaKnown RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 ZNF76P36508 570 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 MAP3K11Q16584 847 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 IFIT1BQ5T764 474 aaKnown RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 PDE4BQ07343 736 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 ZBTB38Q8NAP3 1195 aaPredicted RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 TXLNAP40222 546 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 DOK7Q18PE1 504 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 PHKBQ93100 1093 aa11.11□□□□□ -0.63
TTC39C-203ENST00000540918 SEC63Q9UGP8 760 aaKnown RBP11.11□□□□□ -0.63
TTC39C-203ENST00000540918 NEXMIFQ5QGS0 1516 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 MAP3K15Q6ZN16 1313 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 NBPF14Q5TI25 921 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 CCDC102BQ68D86 513 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 DHX32Q7L7V1 743 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 ZNF589Q86UQ0 364 aaPredicted RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 FEZ1Q99689 392 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 NAT10Q9H0A0 1025 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 CAMSAP1Q5T5Y3 1602 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 PTPDC1A2A3K4 754 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 TPM1P09493 284 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 PARP10Q53GL7 1025 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 ANKRD20A12PQ8NF67 263 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 LDHCP07864 332 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 NAP1L1P55209 391 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 ESR2Q92731 530 aa11.1□□□□□ -0.63
TTC39C-203ENST00000540918 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 CPSF1Q10570 1443 aaKnown RBP11.1□□□□□ -0.63
TTC39C-203ENST00000540918 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 RBM25P49756 843 aaKnown RBP11.09□□□□□ -0.63
TTC39C-203ENST00000540918 GRM1Q13255 1194 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 ZYXQ15942 572 aaKnown RBP11.09□□□□□ -0.63
TTC39C-203ENST00000540918 FAM47AQ5JRC9 791 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 SUSD4Q5VX71 490 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 LPIN2Q92539 896 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 ERCC4Q92889 916 aaPredicted RBP11.09□□□□□ -0.63
TTC39C-203ENST00000540918 PLIN2Q99541 437 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 IBTKQ9P2D0 1353 aaPredicted RBP11.09□□□□□ -0.63
TTC39C-203ENST00000540918 QRICH2Q9H0J4 1663 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 PIK3C2BO00750 1634 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 CCDC194A0A1B0GVG4 234 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 PRKG1Q13976 671 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 RTN1Q16799 776 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 HEATR3Q7Z4Q2 680 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 NLRP10Q86W26 655 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 DACT1Q9NYF0 836 aa11.09□□□□□ -0.63
TTC39C-203ENST00000540918 GTF2IP78347 998 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 CHRNDQ07001 517 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 ZNF804AQ7Z570 1209 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 ZNF830Q96NB3 372 aaPredicted RBP11.08□□□□□ -0.64
TTC39C-203ENST00000540918 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 SCNN1DP51172 638 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 ANAPC15P60006 121 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 C1orf167Q5SNV9 1468 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
TTC39C-203ENST00000540918 SNX21Q969T3 373 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms