RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 FAN1Q9Y2M0 1017 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 NBPF9Q3BBW0 867 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 NBPF6Q5VWK0 638 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 NBPF10Q6P3W6 841 aaKnown RBP11.28□□□□□ -0.6
CLDN2-202ENST00000540876 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 IP6K1Q92551 441 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 NBPF4Q96M43 638 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 EYA1Q99502 592 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
CLDN2-202ENST00000540876 SMC3Q9UQE7 1217 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 MARF1Q9Y4F3 1742 aaKnown RBP11.27□□□□□ -0.6
CLDN2-202ENST00000540876 VPS37CA5D8V6 355 aaPredicted RBP11.27□□□□□ -0.6
CLDN2-202ENST00000540876 PHACTR2O75167 634 aa11.27□□□□□ -0.6
CLDN2-202ENST00000540876 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.6
CLDN2-202ENST00000540876 LONRF2Q1L5Z9 754 aa11.27□□□□□ -0.6
CLDN2-202ENST00000540876 PRPF38AQ8NAV1 312 aaKnown RBP11.27□□□□□ -0.6
CLDN2-202ENST00000540876 FAXDC2Q96IV6 333 aa11.27□□□□□ -0.6
CLDN2-202ENST00000540876 RTL1A6NKG5 1358 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 ALS2Q96Q42 1657 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 SRGAP3O43295 1099 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 IBSPP21815 317 aaPredicted RBP11.27□□□□□ -0.61
CLDN2-202ENST00000540876 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
CLDN2-202ENST00000540876 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.61
CLDN2-202ENST00000540876 C11orf91Q3C1V1 193 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 ERC1Q8IUD2 1116 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 ANKRD24Q8TF21 1146 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 MRFAP1L1Q96HT8 127 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 PARD6BQ9BYG5 372 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 AKAP2Q9Y2D5 859 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
CLDN2-202ENST00000540876 FLT4P35916 1363 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 KLHL33A6NCF5 533 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 N4BP1O75113 896 aaKnown RBP11.26□□□□□ -0.61
CLDN2-202ENST00000540876 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
CLDN2-202ENST00000540876 BTG4Q9NY30 223 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 NFAT5O94916 1531 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 RGS12O14924 1447 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 FCHSD2O94868 740 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 ELF1P32519 619 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 ETF1P62495 437 aaKnown RBP11.26□□□□□ -0.61
CLDN2-202ENST00000540876 APOBRQ0VD83 1088 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 GPR161Q8N6U8 529 aaKnown RBP11.26□□□□□ -0.61
CLDN2-202ENST00000540876 N4BP2L2Q92802 583 aaPredicted RBP11.26□□□□□ -0.61
CLDN2-202ENST00000540876 C8orf37Q96NL8 207 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 NHSL1Q5SYE7 1610 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
CLDN2-202ENST00000540876 BECN2A8MW95 431 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 PPFIA4O75335 1185 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 LRRFIP1Q32MZ4 808 aaKnown RBP11.25□□□□□ -0.61
CLDN2-202ENST00000540876 NBPF11Q86T75 865 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
CLDN2-202ENST00000540876 DCTPP1Q9H773 170 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 TSPYL6Q8N831 410 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 CNNM3Q8NE01 707 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 GNAI3P08754 354 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 INHBEP58166 350 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
CLDN2-202ENST00000540876 CTCFLQ8NI51 663 aaPredicted RBP11.25□□□□□ -0.61
CLDN2-202ENST00000540876 BORCS6Q96GS4 357 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 VEZTQ9HBM0 779 aa11.25□□□□□ -0.61
CLDN2-202ENST00000540876 COL3A1P02461 1466 aaPredicted RBP11.24□□□□□ -0.61
CLDN2-202ENST00000540876 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
CLDN2-202ENST00000540876 RDXP35241 583 aaKnown RBP11.24□□□□□ -0.61
CLDN2-202ENST00000540876 EVA1CP58658 441 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 SCRN1Q12765 414 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 NEDD9Q14511 834 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
CLDN2-202ENST00000540876 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 FAM107BQ9H098 131 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
CLDN2-202ENST00000540876 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
CLDN2-202ENST00000540876 NF2P35240 595 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 FAM173BQ6P4H8 233 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 KCND1Q9NSA2 647 aa11.24□□□□□ -0.61
CLDN2-202ENST00000540876 C21orf2O43822 256 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 GSDMDP57764 484 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 ZKSCAN8Q15776 578 aaPredicted RBP11.23□□□□□ -0.61
CLDN2-202ENST00000540876 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 HSP90B2PQ58FF3 399 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 FERMT3Q86UX7 667 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 EP400Q96L91 3159 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 SLIT3O75094 1523 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
CLDN2-202ENST00000540876 IRX1P78414 480 aaPredicted RBP11.23□□□□□ -0.61
CLDN2-202ENST00000540876 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 SARM1Q6SZW1 724 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 ESYT1Q9BSJ8 1104 aa11.23□□□□□ -0.61
CLDN2-202ENST00000540876 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 EXOC5O00471 708 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
CLDN2-202ENST00000540876 ANAPC15P60006 121 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 KRT85P78386 507 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 TOM1L2Q6ZVM7 507 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 FMNL3Q8IVF7 1028 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms