RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ZNF512BQ96KM6 892 aaPredicted RBP29.61■■■□□ 2.33
TTC3-225ENST00000540756 RFX7Q2KHR2 1363 aa29.61■■■□□ 2.33
TTC3-225ENST00000540756 RABEP1Q15276 862 aa29.61■■■□□ 2.33
TTC3-225ENST00000540756 ERICH6Q7L0X2 663 aa29.61■■■□□ 2.33
TTC3-225ENST00000540756 SNX21Q969T3 373 aa29.61■■■□□ 2.33
TTC3-225ENST00000540756 CCDC171Q6TFL3 1326 aa29.6■■■□□ 2.33
TTC3-225ENST00000540756 CYP2E1P05181 493 aaPredicted RBP29.6■■■□□ 2.33
TTC3-225ENST00000540756 MCCP23508 829 aa29.6■■■□□ 2.33
TTC3-225ENST00000540756 HSCBQ8IWL3 235 aa29.59■■■□□ 2.33
TTC3-225ENST00000540756 RASEFQ8IZ41 740 aa29.59■■■□□ 2.33
TTC3-225ENST00000540756 NLGN1Q8N2Q7 840 aa29.59■■■□□ 2.33
TTC3-225ENST00000540756 HMG20BQ9P0W2 317 aa29.59■■■□□ 2.33
TTC3-225ENST00000540756 EPB41L2O43491 1005 aaKnown RBP29.58■■■□□ 2.33
TTC3-225ENST00000540756 RASGRF1Q13972 1273 aa29.58■■■□□ 2.33
TTC3-225ENST00000540756 CRY2Q49AN0 593 aa29.58■■■□□ 2.33
TTC3-225ENST00000540756 FLAD1Q8NFF5 587 aa29.58■■■□□ 2.33
TTC3-225ENST00000540756 KLRK1P26718 216 aa29.57■■■□□ 2.32
TTC3-225ENST00000540756 GYG1P46976 350 aa29.57■■■□□ 2.32
TTC3-225ENST00000540756 PIH1D3Q9NQM4 214 aaKnown RBP29.57■■■□□ 2.32
TTC3-225ENST00000540756 GRAPQ13588 217 aa29.57■■■□□ 2.32
TTC3-225ENST00000540756 SLC15A2Q16348 729 aa29.57■■■□□ 2.32
TTC3-225ENST00000540756 MCMDC2Q4G0Z9 681 aa29.57■■■□□ 2.32
TTC3-225ENST00000540756 GRAPLQ8TC17 118 aaPredicted RBP29.57■■■□□ 2.32
TTC3-225ENST00000540756 RNF113AO15541 343 aaKnown RBP29.56■■■□□ 2.32
TTC3-225ENST00000540756 MMP10P09238 476 aa29.56■■■□□ 2.32
TTC3-225ENST00000540756 UQCRFS1P1P0C7P4 283 aa29.56■■■□□ 2.32
TTC3-225ENST00000540756 IQSEC3Q9UPP2 1182 aaPredicted RBP29.56■■■□□ 2.32
TTC3-225ENST00000540756 ZMYM1Q5SVZ6 1142 aa29.55■■■□□ 2.32
TTC3-225ENST00000540756 PRPF40BQ6NWY9 871 aaKnown RBP29.55■■■□□ 2.32
TTC3-225ENST00000540756 MAP4K1Q92918 833 aa29.55■■■□□ 2.32
TTC3-225ENST00000540756 SNX14Q9Y5W7 946 aa29.55■■■□□ 2.32
TTC3-225ENST00000540756 UBE4AQ14139 1066 aa29.55■■■□□ 2.32
TTC3-225ENST00000540756 SPATA5Q8NB90 893 aa29.55■■■□□ 2.32
TTC3-225ENST00000540756 RPGRQ92834 1020 aaKnown RBP29.55■■■□□ 2.32
TTC3-225ENST00000540756 RBM8AQ9Y5S9 174 aaKnown RBP29.55■■■□□ 2.32
TTC3-225ENST00000540756 GOLGB1Q14789 3259 aaKnown RBP29.55■■■□□ 2.32
TTC3-225ENST00000540756 ANKRD31Q8N7Z5 1873 aa29.55■■■□□ 2.32
TTC3-225ENST00000540756 ANAPC15P60006 121 aa29.54■■■□□ 2.32
TTC3-225ENST00000540756 MYH7P12883 1935 aa29.54■■■□□ 2.32
TTC3-225ENST00000540756 NECTIN1Q15223 517 aa29.53■■■□□ 2.32
TTC3-225ENST00000540756 OSBP2Q969R2 916 aa29.53■■■□□ 2.32
TTC3-225ENST00000540756 SLKQ9H2G2 1235 aaPredicted RBP29.53■■■□□ 2.32
TTC3-225ENST00000540756 M0R2C6 588 aa29.52■■■□□ 2.32
TTC3-225ENST00000540756 IL17RAQ96F46 866 aa29.52■■■□□ 2.32
TTC3-225ENST00000540756 UPF3BQ9BZI7 483 aaKnown RBP29.52■■■□□ 2.32
TTC3-225ENST00000540756 MAST3O60307 1309 aa29.52■■■□□ 2.32
TTC3-225ENST00000540756 NEK4P51957 841 aa29.52■■■□□ 2.32
TTC3-225ENST00000540756 VPS53Q5VIR6 699 aa29.52■■■□□ 2.32
TTC3-225ENST00000540756 PDGFDQ9GZP0 370 aaPredicted RBP29.52■■■□□ 2.32
TTC3-225ENST00000540756 HELLSQ9NRZ9 838 aa29.52■■■□□ 2.32
TTC3-225ENST00000540756 NRXN2Q9P2S2 1712 aa29.51■■■□□ 2.32
TTC3-225ENST00000540756 FAM84BQ96KN1 310 aaPredicted RBP29.5■■■□□ 2.31
TTC3-225ENST00000540756 STK32BQ9NY57 414 aa29.5■■■□□ 2.31
TTC3-225ENST00000540756 IDH1O75874 414 aaKnown RBP29.5■■■□□ 2.31
TTC3-225ENST00000540756 KCNJ4P48050 445 aa29.5■■■□□ 2.31
TTC3-225ENST00000540756 SF3B2Q13435 895 aaKnown RBP29.5■■■□□ 2.31
TTC3-225ENST00000540756 ANKRD2Q9GZV1 360 aa29.5■■■□□ 2.31
TTC3-225ENST00000540756 TAF6LQ9Y6J9 622 aa29.5■■■□□ 2.31
TTC3-225ENST00000540756 ZNF804BA4D1E1 1349 aa29.49■■■□□ 2.31
TTC3-225ENST00000540756 KLRG2A4D1S0 409 aaPredicted RBP29.49■■■□□ 2.31
TTC3-225ENST00000540756 CREB3L3Q68CJ9 461 aa29.49■■■□□ 2.31
TTC3-225ENST00000540756 TXNRD3Q86VQ6 643 aa29.49■■■□□ 2.31
TTC3-225ENST00000540756 K7ELQ4 463 aaPredicted RBP29.49■■■□□ 2.31
TTC3-225ENST00000540756 WASHC4Q2M389 1173 aa29.49■■■□□ 2.31
TTC3-225ENST00000540756 ADCK5Q3MIX3 580 aa29.49■■■□□ 2.31
TTC3-225ENST00000540756 PUS7LQ9H0K6 701 aaKnown RBP29.49■■■□□ 2.31
TTC3-225ENST00000540756 WWC3Q9ULE0 1092 aa29.49■■■□□ 2.31
TTC3-225ENST00000540756 BAG6P46379 1132 aa29.48■■■□□ 2.31
TTC3-225ENST00000540756 RBM17Q96I25 401 aaKnown RBP29.48■■■□□ 2.31
TTC3-225ENST00000540756 TTF1Q15361 905 aaPredicted RBP29.47■■■□□ 2.31
TTC3-225ENST00000540756 SLC9C2Q5TAH2 1124 aa29.47■■■□□ 2.31
TTC3-225ENST00000540756 KCNB2Q92953 911 aa29.47■■■□□ 2.31
TTC3-225ENST00000540756 ANKIB1Q9P2G1 1089 aa29.47■■■□□ 2.31
TTC3-225ENST00000540756 PARP3Q9Y6F1 533 aa29.47■■■□□ 2.31
TTC3-225ENST00000540756 COL1A1P02452 1464 aaPredicted RBP29.47■■■□□ 2.31
TTC3-225ENST00000540756 SLC27A2O14975 620 aa29.47■■■□□ 2.31
TTC3-225ENST00000540756 COL9A3Q14050 684 aaPredicted RBP29.47■■■□□ 2.31
TTC3-225ENST00000540756 TICAM2Q86XR7 235 aa29.47■■■□□ 2.31
TTC3-225ENST00000540756 CPA1P15085 419 aa29.46■■■□□ 2.31
TTC3-225ENST00000540756 HOXA10P31260 410 aaPredicted RBP29.46■■■□□ 2.31
TTC3-225ENST00000540756 BRIP1Q9BX63 1249 aa29.46■■■□□ 2.31
TTC3-225ENST00000540756 ST18O60284 1047 aa29.45■■■□□ 2.31
TTC3-225ENST00000540756 ZFYP08048 801 aaPredicted RBP29.45■■■□□ 2.31
TTC3-225ENST00000540756 ADD2P35612 726 aa29.45■■■□□ 2.31
TTC3-225ENST00000540756 CAVIN4Q5BKX8 364 aa29.45■■■□□ 2.31
TTC3-225ENST00000540756 FBXO33Q7Z6M2 555 aa29.45■■■□□ 2.3
TTC3-225ENST00000540756 VPS37DQ86XT2 251 aa29.45■■■□□ 2.3
TTC3-225ENST00000540756 GPR101Q96P66 508 aaPredicted RBP29.45■■■□□ 2.3
TTC3-225ENST00000540756 FOXD4L1Q9NU39 408 aa29.45■■■□□ 2.3
TTC3-225ENST00000540756 APPBP2Q92624 585 aa29.44■■■□□ 2.3
TTC3-225ENST00000540756 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.44■■■□□ 2.39e-9■□□□□ 10.8
TTC3-225ENST00000540756 DOCK2Q92608 1830 aa29.44■■■□□ 2.3
TTC3-225ENST00000540756 IRS2Q9Y4H2 1338 aa29.44■■■□□ 2.3
TTC3-225ENST00000540756 GPSM2P81274 684 aa29.44■■■□□ 2.3
TTC3-225ENST00000540756 LRRFIP1Q32MZ4 808 aaKnown RBP29.44■■■□□ 2.3
TTC3-225ENST00000540756 HSPD1P10809 573 aaKnown RBP29.43■■■□□ 2.3
TTC3-225ENST00000540756 PDE6AP16499 860 aa29.43■■■□□ 2.3
TTC3-225ENST00000540756 ZNF532Q9HCE3 1301 aa29.43■■■□□ 2.3
TTC3-225ENST00000540756 A0A0G2JLW4 131 aa29.42■■■□□ 2.3
TTC3-225ENST00000540756 TCRBV5S4A2TA0A5A2 114 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms