RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 MUC3BQ9H195 1237 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
MDM2-227ENST00000540709 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 DLL1O00548 723 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 ICMTO60725 284 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 TNFRSF21O75509 655 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 NPR3P17342 541 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 PTPRAP18433 802 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 EHHADHQ08426 723 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 PDE4CQ08493 712 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 RSPO4Q2I0M5 234 aaPredicted RBP7.09□□□□□ -1.27
MDM2-227ENST00000540709 SALL4Q9UJQ4 1053 aa7.09□□□□□ -1.27
MDM2-227ENST00000540709 POLR3DP05423 398 aaPredicted RBP7.08□□□□□ -1.28
MDM2-227ENST00000540709 NOS3P29474 1203 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 CABP4P57796 275 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 ADAMTSL4Q6UY14 1074 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 CACTIN-AS1Q8N1I8 211 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 TMC1Q8TDI8 760 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 HHIPQ96QV1 700 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 OSMRQ99650 979 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 CHRDQ9H2X0 955 aa7.08□□□□□ -1.28
MDM2-227ENST00000540709 PDE2AO00408 941 aaPredicted RBP7.07□□□□□ -1.28
MDM2-227ENST00000540709 EPHA1P21709 976 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 MAP4K3Q8IVH8 894 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 AGGF1Q8N302 714 aaeCLIP7.07□□□□□ -1.28
MDM2-227ENST00000540709 GALNT11Q8NCW6 608 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 ASAP3Q8TDY4 903 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 SNX29Q8TEQ0 813 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 SLC7A3Q8WY07 619 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 MRPL18Q9H0U6 180 aaKnown RBP7.07□□□□□ -1.28
MDM2-227ENST00000540709 AKTIPQ9H8T0 292 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 DZANK1Q9NVP4 752 aa7.07□□□□□ -1.28
MDM2-227ENST00000540709 FSCN2O14926 492 aa7.06□□□□□ -1.28
MDM2-227ENST00000540709 CD68P34810 354 aaPredicted RBP7.06□□□□□ -1.28
MDM2-227ENST00000540709 NKAPLQ5M9Q1 402 aa7.06□□□□□ -1.28
MDM2-227ENST00000540709 EGFL7Q9UHF1 273 aa7.06□□□□□ -1.28
MDM2-227ENST00000540709 DDX3YO15523 660 aaKnown RBP7.05□□□□□ -1.28
MDM2-227ENST00000540709 NDUFB5O43674 189 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 DYRK3O43781 588 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 EDN3P14138 238 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 GLB1P16278 677 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 CCER1Q8TC90 406 aaPredicted RBP7.05□□□□□ -1.28
MDM2-227ENST00000540709 DCAF11Q8TEB1 546 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 KLHDC7BQ96G42 594 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 ZKSCAN3Q9BRR0 538 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 SRA1Q9HD15 236 aaKnown RBP7.05□□□□□ -1.28
MDM2-227ENST00000540709 LATS2Q9NRM7 1088 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 AMOTL2Q9Y2J4 779 aa7.05□□□□□ -1.28
MDM2-227ENST00000540709 DUOXA2Q1HG44 320 aa7.04□□□□□ -1.28
MDM2-227ENST00000540709 ACAD11Q709F0 780 aa7.04□□□□□ -1.28
MDM2-227ENST00000540709 GJD3Q8N144 294 aa7.04□□□□□ -1.28
MDM2-227ENST00000540709 MEGF10Q96KG7 1140 aa7.04□□□□□ -1.28
MDM2-227ENST00000540709 SEC31BQ9NQW1 1179 aa7.04□□□□□ -1.28
MDM2-227ENST00000540709 KCNK4Q9NYG8 393 aa7.04□□□□□ -1.28
MDM2-227ENST00000540709 F8W735 103 aaPredicted RBP7.03□□□□□ -1.28
MDM2-227ENST00000540709 H3BRJ5 948 aa7.03□□□□□ -1.28
MDM2-227ENST00000540709 NFKBIEO00221 500 aa7.03□□□□□ -1.28
MDM2-227ENST00000540709 NLRP12P59046 1061 aa7.03□□□□□ -1.28
MDM2-227ENST00000540709 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
MDM2-227ENST00000540709 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
MDM2-227ENST00000540709 ADAM19Q9H013 955 aa7.03□□□□□ -1.28
MDM2-227ENST00000540709 ZFYVE28Q9HCC9 887 aa7.03□□□□□ -1.28
MDM2-227ENST00000540709 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
MDM2-227ENST00000540709 WISP1O95388 367 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 ITGB7P26010 798 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 ARL4DP49703 201 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 ARHGAP4P98171 946 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 PRSS36Q5K4E3 855 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 ZMYM1Q5SVZ6 1142 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 TXNDC2Q86VQ3 553 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 KLHL23Q8NBE8 558 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 NXPE3Q969Y0 559 aa7.02□□□□□ -1.29
MDM2-227ENST00000540709 METTL12A8MUP2 240 aa7.01□□□□□ -1.29
MDM2-227ENST00000540709 XP32Q5T750 250 aa7.01□□□□□ -1.29
MDM2-227ENST00000540709 USPL1Q5W0Q7 1092 aa7.01□□□□□ -1.29
MDM2-227ENST00000540709 TMEM130Q8N3G9 435 aa7.01□□□□□ -1.29
MDM2-227ENST00000540709 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
MDM2-227ENST00000540709 BSNDQ8WZ55 320 aa7.01□□□□□ -1.29
MDM2-227ENST00000540709 SCO2A0A1W2PP80 73 aa7□□□□□ -1.29
MDM2-227ENST00000540709 NEFLP07196 543 aa7□□□□□ -1.29
MDM2-227ENST00000540709 H2AFB1P0C5Y9 115 aa7□□□□□ -1.29
MDM2-227ENST00000540709 H2AFB2P0C5Z0 115 aa7□□□□□ -1.29
MDM2-227ENST00000540709 PIP4K2BP78356 416 aa7□□□□□ -1.29
MDM2-227ENST00000540709 PDE3BQ13370 1112 aa7□□□□□ -1.29
MDM2-227ENST00000540709 ORC1Q13415 861 aa7□□□□□ -1.29
MDM2-227ENST00000540709 IKBKEQ14164 716 aa7□□□□□ -1.29
MDM2-227ENST00000540709 ECM1Q16610 540 aa7□□□□□ -1.29
MDM2-227ENST00000540709 HGSNATQ68CP4 663 aa7□□□□□ -1.29
MDM2-227ENST00000540709 ZC3HAV1Q7Z2W4 902 aaKnown RBP7□□□□□ -1.29
MDM2-227ENST00000540709 UBASH3BQ8TF42 649 aa7□□□□□ -1.29
MDM2-227ENST00000540709 SSBP4Q9BWG4 385 aaPredicted RBP7□□□□□ -1.29
MDM2-227ENST00000540709 NIF3L1Q9GZT8 377 aa7□□□□□ -1.29
MDM2-227ENST00000540709 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
MDM2-227ENST00000540709 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
MDM2-227ENST00000540709 FOXD4L4Q8WXT5 416 aaPredicted RBP6.99□□□□□ -1.29
MDM2-227ENST00000540709 SOX13Q9UN79 622 aa6.99□□□□□ -1.29
MDM2-227ENST00000540709 SOX1O00570 391 aaPredicted RBP6.98□□□□□ -1.29
MDM2-227ENST00000540709 SART1O43290 800 aaKnown RBP6.98□□□□□ -1.29
MDM2-227ENST00000540709 ADAM11O75078 769 aa6.98□□□□□ -1.29
MDM2-227ENST00000540709 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms