RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 E9PSI1 815 aa16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 MAP2K2P36507 400 aa16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 KIF4BQ2VIQ3 1234 aa16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 STRIP1Q5VSL9 837 aa16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 TXNRD3Q86VQ6 643 aa16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 TRMT2AQ8IZ69 625 aaKnown RBP16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 MRPL50Q8N5N7 158 aaKnown RBP16.65■□□□□ 0.26
SEMA4D-223ENST00000540475 USP17L8P0C7I0 530 aa16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 CHRNDQ07001 517 aa16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 EPHA10Q5JZY3 1008 aa16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 CYP4F22Q6NT55 531 aa16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 KRT26Q7Z3Y9 468 aa16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
SEMA4D-223ENST00000540475 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 RBM26Q5T8P6 1007 aaKnown RBP16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 KAZALD1Q96I82 304 aa16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 MYOZ2Q9NPC6 264 aa16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 MYO3BQ8WXR4 1341 aa16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
SEMA4D-223ENST00000540475 SCARF1Q14162 830 aa16.62■□□□□ 0.25
SEMA4D-223ENST00000540475 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
SEMA4D-223ENST00000540475 DLK2Q6UY11 383 aa16.62■□□□□ 0.25
SEMA4D-223ENST00000540475 TNS4Q8IZW8 715 aa16.62■□□□□ 0.25
SEMA4D-223ENST00000540475 PTPRCP08575 1304 aa16.62■□□□□ 0.25
SEMA4D-223ENST00000540475 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
SEMA4D-223ENST00000540475 KLRK1P26718 216 aa16.61■□□□□ 0.25
SEMA4D-223ENST00000540475 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-223ENST00000540475 ASTN2O75129 1339 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-223ENST00000540475 ADM5C9JUS6 153 aa16.6■□□□□ 0.25
SEMA4D-223ENST00000540475 HSPA8P11142 646 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-223ENST00000540475 CD209Q9NNX6 404 aa16.6■□□□□ 0.25
SEMA4D-223ENST00000540475 GGA3Q9NZ52 723 aa16.6■□□□□ 0.25
SEMA4D-223ENST00000540475 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 RABL6Q3YEC7 729 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 TTLL5Q6EMB2 1281 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 SLC4A10Q6U841 1118 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 SSH1Q8WYL5 1049 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 ZNF408Q9H9D4 720 aa16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 GBA2Q9HCG7 927 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-223ENST00000540475 FAM155AB1AL88 458 aaPredicted RBP16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 AOC2O75106 756 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 TAF5LO75529 589 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 IL1R1P14778 569 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 LBX1P52954 281 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 HUNKP57058 714 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 ANGEL2Q5VTE6 544 aaKnown RBP16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 LDHAL6AQ6ZMR3 332 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 C2orf69Q8N8R5 385 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 SUCLG2Q96I99 432 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 ZBED3Q96IU2 234 aaPredicted RBP16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 MXD3Q9BW11 206 aa16.58■□□□□ 0.24
SEMA4D-223ENST00000540475 SNAP23O00161 211 aa16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 WNT10BO00744 389 aa16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 KCNJ4P48050 445 aa16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 FKBP1AP62942 108 aaKnown RBP16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 NOGQ13253 232 aa16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 PAXIP1Q6ZW49 1069 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 OGFOD1Q8N543 542 aa16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 CDCA5Q96FF9 252 aa16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 ZNF594Q96JF6 807 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-223ENST00000540475 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 CA12O43570 354 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 CT47B1P0C2W7 299 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 FKBP1BP68106 108 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 GTF2IP78347 998 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 NBPF9Q3BBW0 867 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 RGMBQ6NW40 437 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 MTMR14Q8NCE2 650 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 CHMP3Q9Y3E7 222 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 RIPOR2Q9Y4F9 1068 aa16.56■□□□□ 0.24
SEMA4D-223ENST00000540475 AKAP11Q9UKA4 1901 aa16.55■□□□□ 0.24
SEMA4D-223ENST00000540475 UBE4AQ14139 1066 aa16.55■□□□□ 0.24
SEMA4D-223ENST00000540475 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
SEMA4D-223ENST00000540475 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
SEMA4D-223ENST00000540475 CERS5Q8N5B7 392 aa16.54■□□□□ 0.24
SEMA4D-223ENST00000540475 ANKRD44Q8N8A2 993 aa16.54■□□□□ 0.24
SEMA4D-223ENST00000540475 BEGAINQ9BUH8 593 aa16.54■□□□□ 0.24
SEMA4D-223ENST00000540475 BICC1Q9H694 974 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-223ENST00000540475 CNNM1Q9NRU3 951 aa16.54■□□□□ 0.24
SEMA4D-223ENST00000540475 FAM205AQ6ZU69 1335 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 SASH1O94885 1247 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 GRM1Q13255 1194 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 ZNF804AQ7Z570 1209 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 ZIC5Q96T25 663 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 ARAP2Q8WZ64 1704 aa16.53■□□□□ 0.24
SEMA4D-223ENST00000540475 MROH5Q6ZUA9 1318 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms