RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 THOC1Q96FV9 657 aaKnown RBP12.61□□□□□ -0.39
PBX1-212ENST00000540236 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 CCDC160A6NGH7 325 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 POLE2P56282 527 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 PPP1R7Q15435 360 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 ARL10Q8N8L6 244 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 ZPR1O75312 459 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 AFMP43652 599 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 DIXDC1Q155Q3 683 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 A0A0G2JS52 829 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 Q6ZUG5 572 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 CCDC82Q8N4S0 544 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 DCTPP1Q9H773 170 aa12.61□□□□□ -0.39
PBX1-212ENST00000540236 CYP2E1P05181 493 aaPredicted RBP12.6□□□□□ -0.39
PBX1-212ENST00000540236 USP5P45974 858 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 ZCWPW1Q9H0M4 648 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.6□□□□□ -0.39
PBX1-212ENST00000540236 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 GGCXP38435 758 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 BRD3Q15059 726 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 GGT6Q6P531 493 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 TPCN1Q9ULQ1 816 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 OPA1O60313 960 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 CORO7P57737 925 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 PDHBP11177 359 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 KIF5BP33176 963 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 TRDNQ13061 729 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 PNOCQ13519 176 aa12.6□□□□□ -0.39
PBX1-212ENST00000540236 MCM3P25205 808 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 SCRN1Q12765 414 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 PPFIA4O75335 1185 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 TDRD7Q8NHU6 1098 aaKnown RBP12.59□□□□□ -0.39
PBX1-212ENST00000540236 MRPS27Q92552 414 aaKnown RBP12.59□□□□□ -0.39
PBX1-212ENST00000540236 SGSM3Q96HU1 749 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 RBM8AQ9Y5S9 174 aaKnown RBP12.59□□□□□ -0.39
PBX1-212ENST00000540236 SOWAHDA6NJG2 315 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 TCP11Q8WWU5 503 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 NAPGQ99747 312 aaPredicted RBP12.59□□□□□ -0.39
PBX1-212ENST00000540236 ELP1O95163 1332 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 KDM5BQ9UGL1 1544 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 GOLGA6L9A6NEM1 432 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 C2orf54Q08AI8 447 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 PDCLQ13371 301 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 IQCEQ6IPM2 695 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 IGSF22Q8N9C0 903 aa12.59□□□□□ -0.39
PBX1-212ENST00000540236 TBC1D8O95759 1140 aa12.58□□□□□ -0.39
PBX1-212ENST00000540236 TRIM4Q9C037 500 aa12.58□□□□□ -0.39
PBX1-212ENST00000540236 HAUS2Q9NVX0 235 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 TMEM232C9JQI7 657 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 SESN3P58005 492 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 UBE4AQ14139 1066 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 LGR5O75473 907 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 FAM133BQ5BKY9 247 aaKnown RBP12.58□□□□□ -0.4
PBX1-212ENST00000540236 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 WDR24Q96S15 920 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 CFAP43Q8NDM7 1665 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 CCZ1BP86790 482 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 CCZ1P86791 482 aaPredicted RBP12.58□□□□□ -0.4
PBX1-212ENST00000540236 EGFL6Q8IUX8 553 aa12.58□□□□□ -0.4
PBX1-212ENST00000540236 ABTB1Q969K4 478 aaPredicted RBP12.58□□□□□ -0.4
PBX1-212ENST00000540236 NCOA5Q9HCD5 579 aaKnown RBP12.58□□□□□ -0.4
PBX1-212ENST00000540236 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 TMEM165Q9HC07 324 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 SRGAP2O75044 1071 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 SLC7A5Q01650 507 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 IRX2Q9BZI1 471 aaPredicted RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 PPP1R12AO14974 1030 aaPredicted RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 SYKP43405 635 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 DPCR1Q3MIW9 517 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 ZNHIT6Q9NWK9 470 aaKnown RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 PDHA1P08559 390 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 CDC25BP30305 580 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 ANKRD44Q8N8A2 993 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 ARHGAP25P42331 645 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 PTPROQ16827 1216 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 CLEC17AQ6ZS10 378 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 UBLCP1Q8WVY7 318 aaPredicted RBP12.57□□□□□ -0.4
PBX1-212ENST00000540236 SH3GL3Q99963 347 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 ZMYM3Q14202 1370 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
PBX1-212ENST00000540236 BACH1O14867 736 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 CCDC96Q2M329 555 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
PBX1-212ENST00000540236 NEFHP12036 1026 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 CCDC170Q8IYT3 715 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 CARD10Q9BWT7 1032 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
PBX1-212ENST00000540236 ATP1A3P13637 1013 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms