RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 SNW1Q13573 536 aaKnown RBP13.94□□□□□ -0.18
NEK6-212ENST00000539416 GORABQ5T7V8 394 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 G2E3Q7L622 706 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 MRFAP1L1Q96HT8 127 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 YY1AP1Q9H869 796 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
NEK6-212ENST00000539416 ELP1O95163 1332 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
NEK6-212ENST00000539416 A0A087WWV3 80 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 SGSM2O43147 1006 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 CASQ1P31415 396 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 TPM4P67936 248 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
NEK6-212ENST00000539416 SARM1Q6SZW1 724 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 IL1RAPL2Q9NP60 686 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.93□□□□□ -0.18
NEK6-212ENST00000539416 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
NEK6-212ENST00000539416 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
NEK6-212ENST00000539416 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 PWP2Q15269 919 aaKnown RBP13.93□□□□□ -0.18
NEK6-212ENST00000539416 ME3Q16798 604 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 ADCK5Q3MIX3 580 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 E4F1Q66K89 784 aaPredicted RBP13.93□□□□□ -0.18
NEK6-212ENST00000539416 TMCO3Q6UWJ1 677 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 NUTM1Q86Y26 1132 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
NEK6-212ENST00000539416 GOLGA6L19H0YKK7 550 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 SASH3O75995 380 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 ZNF772Q68DY9 489 aaPredicted RBP13.92□□□□□ -0.18
NEK6-212ENST00000539416 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 SPATA32Q96LK8 384 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 ORC3Q9UBD5 711 aaPredicted RBP13.92□□□□□ -0.18
NEK6-212ENST00000539416 OAS2P29728 719 aaKnown RBP13.92□□□□□ -0.18
NEK6-212ENST00000539416 LEO1Q8WVC0 666 aaPredicted RBP13.92□□□□□ -0.18
NEK6-212ENST00000539416 PDRG1Q9NUG6 133 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 GEMIN8Q9NWZ8 242 aaKnown RBP13.92□□□□□ -0.18
NEK6-212ENST00000539416 DOT1LQ8TEK3 1739 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 BCL9O00512 1426 aa13.92□□□□□ -0.18
NEK6-212ENST00000539416 EPB41L2O43491 1005 aaKnown RBP13.91□□□□□ -0.18
NEK6-212ENST00000539416 GNAI2P04899 355 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 REXO1L1PQ8IX06 675 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 PIGBQ92521 554 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 PPP1R13BQ96KQ4 1090 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 EPC1Q9H2F5 836 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 CACNA1FO60840 1977 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 KCPQ6ZWJ8 1503 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
NEK6-212ENST00000539416 KIF2AO00139 706 aaPredicted RBP13.9□□□□□ -0.18
NEK6-212ENST00000539416 COL9A3Q14050 684 aaPredicted RBP13.9□□□□□ -0.18
NEK6-212ENST00000539416 ICE2Q659A1 982 aa13.9□□□□□ -0.18
NEK6-212ENST00000539416 BICD2Q8TD16 824 aa13.9□□□□□ -0.18
NEK6-212ENST00000539416 ZNF496Q96IT1 587 aaPredicted RBP13.9□□□□□ -0.18
NEK6-212ENST00000539416 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
NEK6-212ENST00000539416 GNAI3P08754 354 aa13.9□□□□□ -0.18
NEK6-212ENST00000539416 SRLQ86TD4 932 aa13.9□□□□□ -0.18
NEK6-212ENST00000539416 TBC1D8O95759 1140 aa13.89□□□□□ -0.19
NEK6-212ENST00000539416 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
NEK6-212ENST00000539416 HDGFL1Q5TGJ6 251 aa13.89□□□□□ -0.19
NEK6-212ENST00000539416 CWC27Q6UX04 472 aaKnown RBP13.89□□□□□ -0.19
NEK6-212ENST00000539416 UBXN4Q92575 508 aa13.89□□□□□ -0.19
NEK6-212ENST00000539416 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
NEK6-212ENST00000539416 STK31Q9BXU1 1019 aa13.89□□□□□ -0.19
NEK6-212ENST00000539416 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
NEK6-212ENST00000539416 C5P01031 1676 aa13.89□□□□□ -0.19
NEK6-212ENST00000539416 TPCN1Q9ULQ1 816 aa13.89□□□□□ -0.19
NEK6-212ENST00000539416 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
NEK6-212ENST00000539416 PTH1RQ03431 593 aa13.88□□□□□ -0.19
NEK6-212ENST00000539416 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
NEK6-212ENST00000539416 VPS53Q5VIR6 699 aa13.88□□□□□ -0.19
NEK6-212ENST00000539416 FBXO18Q8NFZ0 1043 aa13.88□□□□□ -0.19
NEK6-212ENST00000539416 ZSCAN31Q96LW9 406 aaPredicted RBP13.88□□□□□ -0.19
NEK6-212ENST00000539416 SCAND2PQ9GZW5 306 aaPredicted RBP13.88□□□□□ -0.19
NEK6-212ENST00000539416 ARGLU1Q9NWB6 273 aaPredicted RBP13.88□□□□□ -0.19
NEK6-212ENST00000539416 ATP8B2P98198 1209 aa13.88□□□□□ -0.19
NEK6-212ENST00000539416 NBPF11Q86T75 865 aa13.88□□□□□ -0.19
NEK6-212ENST00000539416 DHX40Q8IX18 779 aaKnown RBP13.88□□□□□ -0.19
NEK6-212ENST00000539416 SEPT12Q8IYM1 358 aa13.88□□□□□ -0.19
NEK6-212ENST00000539416 SH2B1Q9NRF2 756 aaPredicted RBP13.88□□□□□ -0.19
NEK6-212ENST00000539416 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
NEK6-212ENST00000539416 GPS2Q13227 327 aa13.87□□□□□ -0.19
NEK6-212ENST00000539416 PRPF40BQ6NWY9 871 aaKnown RBP13.87□□□□□ -0.19
NEK6-212ENST00000539416 TOMM22Q9NS69 142 aa13.87□□□□□ -0.19
NEK6-212ENST00000539416 CCT4P50991 539 aaKnown RBP13.87□□□□□ -0.19
NEK6-212ENST00000539416 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
NEK6-212ENST00000539416 A0A0G2JS52 829 aa13.86□□□□□ -0.19
NEK6-212ENST00000539416 BECN2A8MW95 431 aa13.86□□□□□ -0.19
NEK6-212ENST00000539416 FANCGO15287 622 aa13.86□□□□□ -0.19
NEK6-212ENST00000539416 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
NEK6-212ENST00000539416 LMAN1P49257 510 aa13.86□□□□□ -0.19
NEK6-212ENST00000539416 TSGA10IPQ3SY00 556 aa13.86□□□□□ -0.19
NEK6-212ENST00000539416 ZSWIM6Q9HCJ5 1215 aa13.86□□□□□ -0.19
NEK6-212ENST00000539416 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms