RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 RASA1P20936 1047 aa7.77□□□□□ -1.17
LDHC-206ENST00000539369 HIRAP54198 1017 aaPredicted RBP7.77□□□□□ -1.17
LDHC-206ENST00000539369 PSAPL1Q6NUJ1 521 aa7.77□□□□□ -1.17
LDHC-206ENST00000539369 MAFBQ9Y5Q3 323 aaPredicted RBP7.77□□□□□ -1.17
LDHC-206ENST00000539369 SPAG9O60271 1321 aaKnown RBP7.77□□□□□ -1.17
LDHC-206ENST00000539369 PLXNC1O60486 1568 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 NEURL4Q96JN8 1562 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 LRRIQ1Q96JM4 1722 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 TXKP42681 527 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 C1orf53Q5VUE5 145 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 GGT6Q6P531 493 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 POTEAQ6S8J7 498 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 PRR23CQ6ZRP0 262 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 IGFLR1Q9H665 355 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 RGS17Q9UGC6 210 aaPredicted RBP7.76□□□□□ -1.17
LDHC-206ENST00000539369 ZNF777Q9ULD5 760 aaPredicted RBP7.76□□□□□ -1.17
LDHC-206ENST00000539369 HCN4Q9Y3Q4 1203 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 DNMT1P26358 1616 aaKnown RBP7.76□□□□□ -1.17
LDHC-206ENST00000539369 SYCP2Q9BX26 1530 aa7.76□□□□□ -1.17
LDHC-206ENST00000539369 A2MP01023 1474 aa7.75□□□□□ -1.17
LDHC-206ENST00000539369 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
LDHC-206ENST00000539369 YBX3P16989 372 aaKnown RBP eCLIP7.75□□□□□ -1.17
LDHC-206ENST00000539369 HNRNPMP52272 730 aaKnown RBP eCLIP7.75□□□□□ -1.17
LDHC-206ENST00000539369 PHACTR1Q9C0D0 580 aa7.75□□□□□ -1.17
LDHC-206ENST00000539369 DNAJB12Q9NXW2 375 aaKnown RBP7.75□□□□□ -1.17
LDHC-206ENST00000539369 VWDEQ8N2E2 1590 aa7.75□□□□□ -1.17
LDHC-206ENST00000539369 ATP7AQ04656 1500 aa7.74□□□□□ -1.17
LDHC-206ENST00000539369 C21orf2O43822 256 aa7.74□□□□□ -1.17
LDHC-206ENST00000539369 PPP1R12BO60237 982 aaPredicted RBP7.74□□□□□ -1.17
LDHC-206ENST00000539369 SSTR4P31391 388 aa7.74□□□□□ -1.17
LDHC-206ENST00000539369 GRIK5Q16478 980 aa7.74□□□□□ -1.17
LDHC-206ENST00000539369 FBXO11Q86XK2 927 aa7.74□□□□□ -1.17
LDHC-206ENST00000539369 SUSD3Q96L08 255 aa7.74□□□□□ -1.17
LDHC-206ENST00000539369 CALR3Q96L12 384 aaKnown RBP7.74□□□□□ -1.17
LDHC-206ENST00000539369 CDC42BPAQ5VT25 1732 aa7.73□□□□□ -1.17
LDHC-206ENST00000539369 INO80Q9ULG1 1556 aaPredicted RBP7.73□□□□□ -1.17
LDHC-206ENST00000539369 A6NJR5 290 aa7.73□□□□□ -1.17
LDHC-206ENST00000539369 CD97P48960 835 aa7.73□□□□□ -1.17
LDHC-206ENST00000539369 SEC13P55735 322 aa7.73□□□□□ -1.17
LDHC-206ENST00000539369 PPP1R12CQ9BZL4 782 aa7.73□□□□□ -1.17
LDHC-206ENST00000539369 ANKIB1Q9P2G1 1089 aa7.73□□□□□ -1.17
LDHC-206ENST00000539369 GPATCH8Q9UKJ3 1502 aaKnown RBP7.73□□□□□ -1.17
LDHC-206ENST00000539369 TNRQ92752 1358 aa7.72□□□□□ -1.17
LDHC-206ENST00000539369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.72□□□□□ -1.17
LDHC-206ENST00000539369 KIAA1107Q9UPP5 1409 aa7.72□□□□□ -1.17
LDHC-206ENST00000539369 RGS9O75916 674 aaPredicted RBP7.72□□□□□ -1.17
LDHC-206ENST00000539369 MED26O95402 600 aa7.72□□□□□ -1.17
LDHC-206ENST00000539369 PLAURQ03405 335 aa7.72□□□□□ -1.17
LDHC-206ENST00000539369 MSL1Q68DK7 614 aa7.72□□□□□ -1.17
LDHC-206ENST00000539369 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
LDHC-206ENST00000539369 ATAD2Q6PL18 1390 aa7.71□□□□□ -1.17
LDHC-206ENST00000539369 NPHP4O75161 1426 aaPredicted RBP7.71□□□□□ -1.17
LDHC-206ENST00000539369 CASKIN1Q8WXD9 1431 aa7.71□□□□□ -1.17
LDHC-206ENST00000539369 CCDC18Q5T9S5 1454 aa7.71□□□□□ -1.18
LDHC-206ENST00000539369 FSTP19883 344 aa7.71□□□□□ -1.18
LDHC-206ENST00000539369 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
LDHC-206ENST00000539369 ANKLE2Q86XL3 938 aa7.71□□□□□ -1.18
LDHC-206ENST00000539369 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.18
LDHC-206ENST00000539369 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
LDHC-206ENST00000539369 DTWD1Q8N5C7 304 aa7.71□□□□□ -1.18
LDHC-206ENST00000539369 SCG3Q8WXD2 468 aaKnown RBP7.71□□□□□ -1.18
LDHC-206ENST00000539369 C2orf49Q9BVC5 232 aaPredicted RBP7.71□□□□□ -1.18
LDHC-206ENST00000539369 GSX2Q9BZM3 304 aa7.71□□□□□ -1.18
LDHC-206ENST00000539369 POLR1AO95602 1720 aaPredicted RBP7.71□□□□□ -1.18
LDHC-206ENST00000539369 MED14O60244 1454 aa7.7□□□□□ -1.18
LDHC-206ENST00000539369 LRRC7Q96NW7 1537 aa7.7□□□□□ -1.18
LDHC-206ENST00000539369 TAL1P17542 331 aaPredicted RBP7.7□□□□□ -1.18
LDHC-206ENST00000539369 PTK7Q13308 1070 aa7.7□□□□□ -1.18
LDHC-206ENST00000539369 DZIP1LQ8IYY4 767 aaKnown RBP7.7□□□□□ -1.18
LDHC-206ENST00000539369 GAS2L2Q8NHY3 880 aa7.7□□□□□ -1.18
LDHC-206ENST00000539369 LPIN3Q9BQK8 851 aa7.7□□□□□ -1.18
LDHC-206ENST00000539369 OAS3Q9Y6K5 1087 aaKnown RBP7.7□□□□□ -1.18
LDHC-206ENST00000539369 PZPP20742 1482 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L12C9JPN9 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L21D6R901 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 DEAF1O75398 565 aaPredicted RBP7.69□□□□□ -1.18
LDHC-206ENST00000539369 IRAK1P51617 712 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 DPYDQ12882 1025 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 KANK4Q5T7N3 995 aaPredicted RBP7.69□□□□□ -1.18
LDHC-206ENST00000539369 IGF2-ASQ6U949 168 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 BTLAQ7Z6A9 289 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
LDHC-206ENST00000539369 CFDP1Q9UEE9 299 aaPredicted RBP7.69□□□□□ -1.18
LDHC-206ENST00000539369 ZNF644Q9H582 1327 aaPredicted RBP7.69□□□□□ -1.18
LDHC-206ENST00000539369 PLEKHH2Q8IVE3 1493 aa7.68□□□□□ -1.18
LDHC-206ENST00000539369 FAM196BA6NMK8 535 aa7.68□□□□□ -1.18
LDHC-206ENST00000539369 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
LDHC-206ENST00000539369 THEMISQ8N1K5 641 aaPredicted RBP7.68□□□□□ -1.18
LDHC-206ENST00000539369 DHX29Q7Z478 1369 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms