RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 CYP19A1P11511 503 aaPredicted RBP17.28■□□□□ 0.36
CDCA3-207ENST00000538862 RFX5P48382 616 aaPredicted RBP17.28■□□□□ 0.36
CDCA3-207ENST00000538862 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
CDCA3-207ENST00000538862 DNM1Q05193 864 aaKnown RBP17.27■□□□□ 0.36
CDCA3-207ENST00000538862 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
CDCA3-207ENST00000538862 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.36
CDCA3-207ENST00000538862 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
CDCA3-207ENST00000538862 LARP1BQ659C4 914 aaKnown RBP17.27■□□□□ 0.35
CDCA3-207ENST00000538862 KLHDC4Q8TBB5 520 aa17.27■□□□□ 0.35
CDCA3-207ENST00000538862 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.35
CDCA3-207ENST00000538862 CCDC87Q9NVE4 849 aa17.27■□□□□ 0.35
CDCA3-207ENST00000538862 RRP9O43818 475 aaKnown RBP17.26■□□□□ 0.35
CDCA3-207ENST00000538862 PTPN12Q05209 780 aaKnown RBP17.26■□□□□ 0.35
CDCA3-207ENST00000538862 KRT32Q14532 448 aa17.26■□□□□ 0.35
CDCA3-207ENST00000538862 TNNI3KQ59H18 835 aa17.26■□□□□ 0.35
CDCA3-207ENST00000538862 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
CDCA3-207ENST00000538862 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
CDCA3-207ENST00000538862 ZBTB1Q9Y2K1 713 aa17.26■□□□□ 0.35
CDCA3-207ENST00000538862 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
CDCA3-207ENST00000538862 FPGT-TNNI3KV9GXZ4 949 aa17.26■□□□□ 0.35
CDCA3-207ENST00000538862 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
CDCA3-207ENST00000538862 TAF5LO75529 589 aa17.25■□□□□ 0.35
CDCA3-207ENST00000538862 VPS37CA5D8V6 355 aaPredicted RBP17.25■□□□□ 0.35
CDCA3-207ENST00000538862 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
CDCA3-207ENST00000538862 RFC4P35249 363 aa17.25■□□□□ 0.35
CDCA3-207ENST00000538862 FUCA2Q9BTY2 467 aa17.25■□□□□ 0.35
CDCA3-207ENST00000538862 ZMYND15Q9H091 742 aa17.25■□□□□ 0.35
CDCA3-207ENST00000538862 SRP68Q9UHB9 627 aaKnown RBP17.25■□□□□ 0.35
CDCA3-207ENST00000538862 ZNF589Q86UQ0 364 aaPredicted RBP17.24■□□□□ 0.35
CDCA3-207ENST00000538862 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
CDCA3-207ENST00000538862 ELP1O95163 1332 aa17.24■□□□□ 0.35
CDCA3-207ENST00000538862 ADRA2BP18089 450 aa17.23■□□□□ 0.35
CDCA3-207ENST00000538862 KRT85P78386 507 aa17.23■□□□□ 0.35
CDCA3-207ENST00000538862 TFCP2Q12800 502 aa17.23■□□□□ 0.35
CDCA3-207ENST00000538862 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
CDCA3-207ENST00000538862 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
CDCA3-207ENST00000538862 TICAM2Q86XR7 235 aa17.23■□□□□ 0.35
CDCA3-207ENST00000538862 PLBD2Q8NHP8 589 aa17.23■□□□□ 0.35
CDCA3-207ENST00000538862 GYS1P13807 737 aa17.22■□□□□ 0.35
CDCA3-207ENST00000538862 HCLS1P14317 486 aaPredicted RBP17.22■□□□□ 0.35
CDCA3-207ENST00000538862 HSP90AA2PQ14568 343 aaPredicted RBP17.22■□□□□ 0.35
CDCA3-207ENST00000538862 UBE3BQ7Z3V4 1068 aa17.22■□□□□ 0.35
CDCA3-207ENST00000538862 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
CDCA3-207ENST00000538862 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
CDCA3-207ENST00000538862 A0A087WZG4 1122 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 STARD3NLO95772 234 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 MMP10P09238 476 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.35
CDCA3-207ENST00000538862 CASP7P55210 303 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 HAUS7Q99871 368 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
CDCA3-207ENST00000538862 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 KDM4AO75164 1064 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 ADCY5O95622 1261 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 A1BGP04217 495 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 USP25Q9UHP3 1055 aa17.21■□□□□ 0.35
CDCA3-207ENST00000538862 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDCA3-207ENST00000538862 KIAA2012Q0VF49 1180 aa17.2■□□□□ 0.34
CDCA3-207ENST00000538862 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
CDCA3-207ENST00000538862 GIMAP6Q6P9H5 292 aa17.2■□□□□ 0.34
CDCA3-207ENST00000538862 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
CDCA3-207ENST00000538862 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
CDCA3-207ENST00000538862 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
CDCA3-207ENST00000538862 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
CDCA3-207ENST00000538862 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
CDCA3-207ENST00000538862 TTC6Q86TZ1 520 aa17.19■□□□□ 0.34
CDCA3-207ENST00000538862 EDC3Q96F86 508 aaKnown RBP17.19■□□□□ 0.34
CDCA3-207ENST00000538862 DBNDD2Q9BQY9 259 aa17.19■□□□□ 0.34
CDCA3-207ENST00000538862 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
CDCA3-207ENST00000538862 GPR108Q9NPR9 543 aa17.19■□□□□ 0.34
CDCA3-207ENST00000538862 H7C1W4 665 aa17.18■□□□□ 0.34
CDCA3-207ENST00000538862 CCDC192P0DO97 292 aa17.18■□□□□ 0.34
CDCA3-207ENST00000538862 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
CDCA3-207ENST00000538862 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
CDCA3-207ENST00000538862 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
CDCA3-207ENST00000538862 TCEANC2Q96MN5 208 aa17.18■□□□□ 0.34
CDCA3-207ENST00000538862 ZNF609O15014 1411 aa17.18■□□□□ 0.34
CDCA3-207ENST00000538862 SH3TC1Q8TE82 1336 aa17.18■□□□□ 0.34
CDCA3-207ENST00000538862 ATP5J2-PTCD1G3V325 749 aa17.17■□□□□ 0.34
CDCA3-207ENST00000538862 ZPR1O75312 459 aa17.17■□□□□ 0.34
CDCA3-207ENST00000538862 PDE4CQ08493 712 aa17.17■□□□□ 0.34
CDCA3-207ENST00000538862 TPRNQ4KMQ1 711 aa17.17■□□□□ 0.34
CDCA3-207ENST00000538862 KBTBD3Q8NAB2 608 aa17.17■□□□□ 0.34
CDCA3-207ENST00000538862 DTNBO60941 627 aa17.17■□□□□ 0.34
CDCA3-207ENST00000538862 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
CDCA3-207ENST00000538862 LMBR1LQ6UX01 489 aa17.17■□□□□ 0.34
CDCA3-207ENST00000538862 DNAJC2Q99543 621 aaKnown RBP17.17■□□□□ 0.34
CDCA3-207ENST00000538862 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
CDCA3-207ENST00000538862 FOXO4P98177 505 aa17.16■□□□□ 0.34
CDCA3-207ENST00000538862 FERMT3Q86UX7 667 aa17.16■□□□□ 0.34
CDCA3-207ENST00000538862 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
CDCA3-207ENST00000538862 CYP21A2P08686 494 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 MAP3K11Q16584 847 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 PIBF1Q8WXW3 757 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 SPATA32Q96LK8 384 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 NUP62CLQ9H1M0 184 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 FGD1P98174 961 aa17.15■□□□□ 0.34
CDCA3-207ENST00000538862 SASS6Q6UVJ0 657 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms