RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SLC5A1P13866 664 aa28.89■■■□□ 2.22
TMEM260-202ENST00000538838 ADORA1P30542 326 aa28.89■■■□□ 2.22
TMEM260-202ENST00000538838 OTUD7AQ8TE49 926 aaPredicted RBP28.89■■■□□ 2.22
TMEM260-202ENST00000538838 DBNLQ9UJU6 430 aaKnown RBP28.89■■■□□ 2.22
TMEM260-202ENST00000538838 IFIT2P09913 472 aaKnown RBP28.88■■■□□ 2.21
TMEM260-202ENST00000538838 RTKN2Q8IZC4 609 aa28.88■■■□□ 2.21
TMEM260-202ENST00000538838 PELP1Q8IZL8 1130 aaKnown RBP28.88■■■□□ 2.21
TMEM260-202ENST00000538838 DBNDD2Q9BQY9 259 aa28.88■■■□□ 2.21
TMEM260-202ENST00000538838 IFIT1P09914 478 aaKnown RBP28.87■■■□□ 2.21
TMEM260-202ENST00000538838 PDE4AP27815 886 aa28.87■■■□□ 2.21
TMEM260-202ENST00000538838 XAGE2Q96GT9 111 aa28.87■■■□□ 2.21
TMEM260-202ENST00000538838 IRS2Q9Y4H2 1338 aa28.87■■■□□ 2.21
TMEM260-202ENST00000538838 GRIPAP1Q4V328 841 aa28.87■■■□□ 2.21
TMEM260-202ENST00000538838 RTFDC1Q9BY42 306 aaPredicted RBP28.87■■■□□ 2.21
TMEM260-202ENST00000538838 YBX3P16989 372 aaKnown RBP eCLIP28.86■■■□□ 2.21
TMEM260-202ENST00000538838 MYH13Q9UKX3 1938 aa28.86■■■□□ 2.21
TMEM260-202ENST00000538838 TXNRD3Q86VQ6 643 aa28.85■■■□□ 2.21
TMEM260-202ENST00000538838 MED23Q9ULK4 1368 aa28.85■■■□□ 2.21
TMEM260-202ENST00000538838 SALL3Q9BXA9 1300 aa28.84■■■□□ 2.21
TMEM260-202ENST00000538838 CCDC88AQ3V6T2 1871 aa28.84■■■□□ 2.21
TMEM260-202ENST00000538838 NFKBIEO00221 500 aa28.83■■■□□ 2.21
TMEM260-202ENST00000538838 FKBP4Q02790 459 aaKnown RBP eCLIP28.83■■■□□ 2.21
TMEM260-202ENST00000538838 PSMD1Q99460 953 aa28.83■■■□□ 2.21
TMEM260-202ENST00000538838 GYG1P46976 350 aa28.83■■■□□ 2.21
TMEM260-202ENST00000538838 RIMBP2O15034 1052 aa28.82■■■□□ 2.2
TMEM260-202ENST00000538838 SUPT20HQ8NEM7 779 aa28.82■■■□□ 2.2
TMEM260-202ENST00000538838 MX1P20591 662 aa28.81■■■□□ 2.2
TMEM260-202ENST00000538838 WASHC4Q2M389 1173 aa28.81■■■□□ 2.2
TMEM260-202ENST00000538838 GORABQ5T7V8 394 aa28.81■■■□□ 2.2
TMEM260-202ENST00000538838 TSHZ3Q63HK5 1081 aa28.81■■■□□ 2.2
TMEM260-202ENST00000538838 C15orf52Q6ZUT6 534 aaKnown RBP28.81■■■□□ 2.2
TMEM260-202ENST00000538838 EYA3Q99504 573 aa28.81■■■□□ 2.2
TMEM260-202ENST00000538838 TAOK3Q9H2K8 898 aa28.81■■■□□ 2.2
TMEM260-202ENST00000538838 PHKA1P46020 1223 aa28.8■■■□□ 2.2
TMEM260-202ENST00000538838 RASSF7Q02833 373 aa28.8■■■□□ 2.2
TMEM260-202ENST00000538838 BCAMP50895 628 aa28.8■■■□□ 2.2
TMEM260-202ENST00000538838 FAM84BQ96KN1 310 aaPredicted RBP28.8■■■□□ 2.2
TMEM260-202ENST00000538838 ZNF277Q9NRM2 450 aaPredicted RBP28.8■■■□□ 2.2
TMEM260-202ENST00000538838 AOC3Q16853 763 aa28.79■■■□□ 2.2
TMEM260-202ENST00000538838 CAVIN4Q5BKX8 364 aa28.79■■■□□ 2.2
TMEM260-202ENST00000538838 CCDC102BQ68D86 513 aa28.79■■■□□ 2.2
TMEM260-202ENST00000538838 PLEKHM2Q8IWE5 1019 aa28.79■■■□□ 2.2
TMEM260-202ENST00000538838 ZC3H12CQ9C0D7 883 aaKnown RBP28.79■■■□□ 2.2
TMEM260-202ENST00000538838 COL4A5P29400 1685 aa28.79■■■□□ 2.2
TMEM260-202ENST00000538838 SBF1O95248 1867 aa28.78■■■□□ 2.2
TMEM260-202ENST00000538838 LTBP3Q9NS15 1303 aa28.78■■■□□ 2.2
TMEM260-202ENST00000538838 CHD4Q14839 1912 aa28.78■■■□□ 2.2
TMEM260-202ENST00000538838 AKAP11Q9UKA4 1901 aa28.78■■■□□ 2.2
TMEM260-202ENST00000538838 RGS3P49796 1198 aa28.77■■■□□ 2.2
TMEM260-202ENST00000538838 GPR162Q16538 588 aa28.77■■■□□ 2.2
TMEM260-202ENST00000538838 ARHGAP27Q6ZUM4 889 aa28.77■■■□□ 2.2
TMEM260-202ENST00000538838 GPATCH3Q96I76 525 aa28.77■■■□□ 2.2
TMEM260-202ENST00000538838 PPIP5K2O43314 1243 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 HIBADHP31937 336 aaKnown RBP28.76■■■□□ 2.2
TMEM260-202ENST00000538838 PDE1AP54750 535 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 KIAA2012Q0VF49 1180 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 CCDC158Q5M9N0 1113 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 TTC39AQ5SRH9 613 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 ZNF804AQ7Z570 1209 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 FBXO33Q7Z6M2 555 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 VPS37DQ86XT2 251 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 ECHDC1Q9NTX5 307 aa28.76■■■□□ 2.2
TMEM260-202ENST00000538838 TTC41PQ6P2S7 1318 aa28.75■■■□□ 2.19
TMEM260-202ENST00000538838 STAP2Q9UGK3 403 aa28.75■■■□□ 2.19
TMEM260-202ENST00000538838 IQSEC3Q9UPP2 1182 aaPredicted RBP28.75■■■□□ 2.19
TMEM260-202ENST00000538838 DICER1Q9UPY3 1922 aaKnown RBP28.74■■■□□ 2.19
TMEM260-202ENST00000538838 IARSP41252 1262 aaKnown RBP28.74■■■□□ 2.19
TMEM260-202ENST00000538838 COL1A1P02452 1464 aaPredicted RBP28.74■■■□□ 2.19
TMEM260-202ENST00000538838 SCN9AQ15858 1988 aa28.74■■■□□ 2.19
TMEM260-202ENST00000538838 ARID4AP29374 1257 aaPredicted RBP28.73■■■□□ 2.19
TMEM260-202ENST00000538838 PRELPP51888 382 aa28.73■■■□□ 2.19
TMEM260-202ENST00000538838 DOK7Q18PE1 504 aa28.73■■■□□ 2.19
TMEM260-202ENST00000538838 SCARF1Q14162 830 aa28.72■■■□□ 2.19
TMEM260-202ENST00000538838 PI4K2BQ8TCG2 481 aa28.72■■■□□ 2.19
TMEM260-202ENST00000538838 DBNDD1Q9H9R9 158 aa28.72■■■□□ 2.19
TMEM260-202ENST00000538838 ZNF646O15015 1829 aaPredicted RBP28.72■■■□□ 2.19
TMEM260-202ENST00000538838 PSME4Q14997 1843 aa28.72■■■□□ 2.19
TMEM260-202ENST00000538838 LARGE2Q8N3Y3 721 aa28.72■■■□□ 2.19
TMEM260-202ENST00000538838 CD209Q9NNX6 404 aa28.72■■■□□ 2.19
TMEM260-202ENST00000538838 AOX1Q06278 1338 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 TIAM2Q8IVF5 1701 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 UQCRFS1P1P0C7P4 283 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 ATP5JP18859 108 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 RASGRF1Q13972 1273 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 COA1Q9GZY4 146 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 VPS33BQ9H267 617 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 OSBPL3Q9H4L5 887 aa28.71■■■□□ 2.19
TMEM260-202ENST00000538838 GNL3LQ9NVN8 582 aaKnown RBP28.71■■■□□ 2.19
TMEM260-202ENST00000538838 UTRNP46939 3433 aa28.7■■■□□ 2.19
TMEM260-202ENST00000538838 AK9Q5TCS8 1911 aa28.7■■■□□ 2.19
TMEM260-202ENST00000538838 G3V3G9 751 aa28.7■■■□□ 2.19
TMEM260-202ENST00000538838 MCAMP43121 646 aa28.7■■■□□ 2.19
TMEM260-202ENST00000538838 DCAF8Q5TAQ9 597 aa28.7■■■□□ 2.19
TMEM260-202ENST00000538838 PI16Q6UXB8 463 aa28.7■■■□□ 2.19
TMEM260-202ENST00000538838 ZNF512BQ96KM6 892 aaPredicted RBP28.7■■■□□ 2.19
TMEM260-202ENST00000538838 ERC2O15083 957 aa28.69■■■□□ 2.18
TMEM260-202ENST00000538838 ECE2O60344 883 aa28.69■■■□□ 2.18
TMEM260-202ENST00000538838 IL1R1P14778 569 aa28.69■■■□□ 2.18
TMEM260-202ENST00000538838 BOLA2Q9H3K6 86 aa28.69■■■□□ 2.18
TMEM260-202ENST00000538838 NDUFB9Q9Y6M9 179 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms