RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 UBE4AQ14139 1066 aa17.19■□□□□ 0.34
CD9-208ENST00000538834 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
CD9-208ENST00000538834 SMC1BQ8NDV3 1235 aa17.19■□□□□ 0.34
CD9-208ENST00000538834 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
CD9-208ENST00000538834 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
CD9-208ENST00000538834 GJA3Q9Y6H8 435 aa17.19■□□□□ 0.34
CD9-208ENST00000538834 MROH5Q6ZUA9 1318 aa17.19■□□□□ 0.34
CD9-208ENST00000538834 RPS12P25398 132 aaKnown RBP17.18■□□□□ 0.34
CD9-208ENST00000538834 PNMA8AQ86V59 439 aaPredicted RBP17.18■□□□□ 0.34
CD9-208ENST00000538834 LDHDQ86WU2 507 aa17.18■□□□□ 0.34
CD9-208ENST00000538834 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
CD9-208ENST00000538834 KLHDC4Q8TBB5 520 aa17.18■□□□□ 0.34
CD9-208ENST00000538834 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
CD9-208ENST00000538834 EYA2O00167 538 aa17.17■□□□□ 0.34
CD9-208ENST00000538834 ITGBL1O95965 494 aaPredicted RBP17.17■□□□□ 0.34
CD9-208ENST00000538834 IL1R1P14778 569 aa17.17■□□□□ 0.34
CD9-208ENST00000538834 FGFR2P21802 821 aa17.17■□□□□ 0.34
CD9-208ENST00000538834 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
CD9-208ENST00000538834 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
CD9-208ENST00000538834 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
CD9-208ENST00000538834 ZBTB22O15209 634 aa17.16■□□□□ 0.34
CD9-208ENST00000538834 CIAO1O76071 339 aa17.16■□□□□ 0.34
CD9-208ENST00000538834 PDE8BO95263 885 aa17.16■□□□□ 0.34
CD9-208ENST00000538834 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
CD9-208ENST00000538834 DACT2Q5SW24 774 aa17.16■□□□□ 0.34
CD9-208ENST00000538834 AGBL3Q8NEM8 1001 aa17.16■□□□□ 0.34
CD9-208ENST00000538834 CD209Q9NNX6 404 aa17.16■□□□□ 0.34
CD9-208ENST00000538834 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
CD9-208ENST00000538834 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
CD9-208ENST00000538834 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
CD9-208ENST00000538834 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
CD9-208ENST00000538834 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
CD9-208ENST00000538834 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
CD9-208ENST00000538834 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
CD9-208ENST00000538834 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
CD9-208ENST00000538834 STRIP1Q5VSL9 837 aa17.15■□□□□ 0.34
CD9-208ENST00000538834 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
CD9-208ENST00000538834 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
CD9-208ENST00000538834 FAM84BQ96KN1 310 aaPredicted RBP17.15■□□□□ 0.34
CD9-208ENST00000538834 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
CD9-208ENST00000538834 GNAI2P04899 355 aa17.14■□□□□ 0.33
CD9-208ENST00000538834 LMOD1P29536 600 aaPredicted RBP17.14■□□□□ 0.33
CD9-208ENST00000538834 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
CD9-208ENST00000538834 POLA2Q14181 598 aa17.13■□□□□ 0.33
CD9-208ENST00000538834 TDRD7Q8NHU6 1098 aaKnown RBP17.13■□□□□ 0.33
CD9-208ENST00000538834 ZC3H15Q8WU90 426 aaKnown RBP17.13■□□□□ 0.33
CD9-208ENST00000538834 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 EGFRP00533 1210 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 MMP14P50281 582 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 FKBP1AP62942 108 aaKnown RBP17.12■□□□□ 0.33
CD9-208ENST00000538834 MICALL2Q8IY33 904 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 DNAJC5GQ8N7S2 189 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
CD9-208ENST00000538834 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
CD9-208ENST00000538834 MS4A1P11836 297 aa17.11■□□□□ 0.33
CD9-208ENST00000538834 ATP8B2P98198 1209 aa17.11■□□□□ 0.33
CD9-208ENST00000538834 PA2G4Q9UQ80 394 aaKnown RBP17.11■□□□□ 0.33
CD9-208ENST00000538834 PLIN1O60240 522 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 SASH1O94885 1247 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
CD9-208ENST00000538834 KCNJ4P48050 445 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 APLP1P51693 650 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 TTLL5Q6EMB2 1281 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
CD9-208ENST00000538834 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
CD9-208ENST00000538834 G3V3G9 751 aa17.09■□□□□ 0.33
CD9-208ENST00000538834 H7C1D1 291 aa17.09■□□□□ 0.33
CD9-208ENST00000538834 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
CD9-208ENST00000538834 PUM3Q15397 648 aaKnown RBP17.09■□□□□ 0.33
CD9-208ENST00000538834 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
CD9-208ENST00000538834 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
CD9-208ENST00000538834 SAMD7Q7Z3H4 446 aa17.09■□□□□ 0.33
CD9-208ENST00000538834 ZNF804AQ7Z570 1209 aa17.09■□□□□ 0.33
CD9-208ENST00000538834 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
CD9-208ENST00000538834 ZBED3Q96IU2 234 aaPredicted RBP17.09■□□□□ 0.33
CD9-208ENST00000538834 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.09■□□□□ 0.33
CD9-208ENST00000538834 HIBADHP31937 336 aaKnown RBP17.08■□□□□ 0.32
CD9-208ENST00000538834 GYG1P46976 350 aa17.08■□□□□ 0.32
CD9-208ENST00000538834 GTF2IP78347 998 aa17.08■□□□□ 0.32
CD9-208ENST00000538834 MVPQ14764 893 aaKnown RBP17.08■□□□□ 0.32
CD9-208ENST00000538834 MAP1SQ66K74 1059 aaPredicted RBP17.08■□□□□ 0.32
CD9-208ENST00000538834 MXD3Q9BW11 206 aa17.08■□□□□ 0.32
CD9-208ENST00000538834 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
CD9-208ENST00000538834 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.32
CD9-208ENST00000538834 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
CD9-208ENST00000538834 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
CD9-208ENST00000538834 LPIN2Q92539 896 aa17.07■□□□□ 0.32
CD9-208ENST00000538834 MYO5AQ9Y4I1 1855 aaKnown RBP17.06■□□□□ 0.32
CD9-208ENST00000538834 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
CD9-208ENST00000538834 MTMR14Q8NCE2 650 aa17.06■□□□□ 0.32
CD9-208ENST00000538834 SIL1Q9H173 461 aa17.06■□□□□ 0.32
CD9-208ENST00000538834 CEP126Q9P2H0 1117 aa17.06■□□□□ 0.32
CD9-208ENST00000538834 PCNTO95613 3336 aa17.05■□□□□ 0.32
CD9-208ENST00000538834 CEP85Q6P2H3 762 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms