RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 USP17L1Q7RTZ2 530 aa18.94■□□□□ 0.62
RAB40B-202ENST00000538809 ZNF594Q96JF6 807 aaPredicted RBP18.94■□□□□ 0.62
RAB40B-202ENST00000538809 ANKRD2Q9GZV1 360 aa18.94■□□□□ 0.62
RAB40B-202ENST00000538809 LEMD3Q9Y2U8 911 aa18.94■□□□□ 0.62
RAB40B-202ENST00000538809 SNAP23O00161 211 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 KCNJ4P48050 445 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 CDC37L1Q7L3B6 337 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 PODNQ7Z5L7 613 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 USP48Q86UV5 1035 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 HELBQ8NG08 1087 aaPredicted RBP18.93■□□□□ 0.62
RAB40B-202ENST00000538809 SUCLG2Q96I99 432 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 MXD3Q9BW11 206 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 ARAP2Q8WZ64 1704 aa18.93■□□□□ 0.62
RAB40B-202ENST00000538809 ASTN2O75129 1339 aaPredicted RBP18.93■□□□□ 0.62
RAB40B-202ENST00000538809 MYH13Q9UKX3 1938 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 ADM5C9JUS6 153 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 TAF5LO75529 589 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 NBPF7P0C2Y1 421 aaPredicted RBP18.92■□□□□ 0.62
RAB40B-202ENST00000538809 GRM1Q13255 1194 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 TAF7LQ5H9L4 462 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 COL13A1Q5TAT6 717 aaPredicted RBP18.92■□□□□ 0.62
RAB40B-202ENST00000538809 AGBL3Q8NEM8 1001 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 GGA3Q9NZ52 723 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 TLL2Q9Y6L7 1015 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 PTPRCP08575 1304 aa18.92■□□□□ 0.62
RAB40B-202ENST00000538809 WDR33Q9C0J8 1336 aaKnown RBP18.92■□□□□ 0.62
RAB40B-202ENST00000538809 CCDC57Q2TAC2 916 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 ALDH1L2Q3SY69 923 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 IFFO2Q5TF58 517 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 CYP4F22Q6NT55 531 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 KAZALD1Q96I82 304 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 GMLQ99445 158 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 COA1Q9GZY4 146 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
RAB40B-202ENST00000538809 CT47B1P0C2W7 299 aaPredicted RBP18.9■□□□□ 0.62
RAB40B-202ENST00000538809 ZNF280AP59817 542 aaPredicted RBP18.9■□□□□ 0.62
RAB40B-202ENST00000538809 DACT2Q5SW24 774 aa18.9■□□□□ 0.62
RAB40B-202ENST00000538809 KRT26Q7Z3Y9 468 aa18.9■□□□□ 0.62
RAB40B-202ENST00000538809 CAPNS2Q96L46 248 aa18.9■□□□□ 0.62
RAB40B-202ENST00000538809 FOXN1O15353 648 aa18.89■□□□□ 0.61
RAB40B-202ENST00000538809 PLIN1O60240 522 aa18.89■□□□□ 0.61
RAB40B-202ENST00000538809 USP17L8P0C7I0 530 aa18.89■□□□□ 0.61
RAB40B-202ENST00000538809 DCPSQ96C86 337 aaKnown RBP18.89■□□□□ 0.61
RAB40B-202ENST00000538809 CNNM1Q9NRU3 951 aa18.89■□□□□ 0.61
RAB40B-202ENST00000538809 UTYO14607 1347 aa18.89■□□□□ 0.61
RAB40B-202ENST00000538809 IRS2Q9Y4H2 1338 aa18.89■□□□□ 0.61
RAB40B-202ENST00000538809 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
RAB40B-202ENST00000538809 SAPCD2Q86UD0 394 aa18.88■□□□□ 0.61
RAB40B-202ENST00000538809 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
RAB40B-202ENST00000538809 MYOZ2Q9NPC6 264 aa18.88■□□□□ 0.61
RAB40B-202ENST00000538809 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
RAB40B-202ENST00000538809 SCARF1Q14162 830 aa18.87■□□□□ 0.61
RAB40B-202ENST00000538809 STRIP1Q5VSL9 837 aa18.87■□□□□ 0.61
RAB40B-202ENST00000538809 ANGEL2Q5VTE6 544 aaKnown RBP18.87■□□□□ 0.61
RAB40B-202ENST00000538809 ECE1P42892 770 aa18.86■□□□□ 0.61
RAB40B-202ENST00000538809 GTF2IP78347 998 aa18.86■□□□□ 0.61
RAB40B-202ENST00000538809 ANKRD44Q8N8A2 993 aa18.86■□□□□ 0.61
RAB40B-202ENST00000538809 AIDAQ96BJ3 306 aa18.86■□□□□ 0.61
RAB40B-202ENST00000538809 PUS3Q9BZE2 481 aaKnown RBP18.86■□□□□ 0.61
RAB40B-202ENST00000538809 CD209Q9NNX6 404 aa18.86■□□□□ 0.61
RAB40B-202ENST00000538809 SCAF8Q9UPN6 1271 aaKnown RBP18.86■□□□□ 0.61
RAB40B-202ENST00000538809 PAPPA2Q9BXP8 1791 aa18.86■□□□□ 0.61
RAB40B-202ENST00000538809 MYO3BQ8WXR4 1341 aa18.85■□□□□ 0.61
RAB40B-202ENST00000538809 AKAP11Q9UKA4 1901 aa18.85■□□□□ 0.61
RAB40B-202ENST00000538809 AOC2O75106 756 aa18.85■□□□□ 0.61
RAB40B-202ENST00000538809 TTLL5Q6EMB2 1281 aa18.85■□□□□ 0.61
RAB40B-202ENST00000538809 SULF1Q8IWU6 871 aa18.85■□□□□ 0.61
RAB40B-202ENST00000538809 WBP1LQ9NX94 342 aa18.85■□□□□ 0.61
RAB40B-202ENST00000538809 RABL6Q3YEC7 729 aaPredicted RBP18.84■□□□□ 0.61
RAB40B-202ENST00000538809 C15orf52Q6ZUT6 534 aaKnown RBP18.84■□□□□ 0.61
RAB40B-202ENST00000538809 ZNF804AQ7Z570 1209 aa18.84■□□□□ 0.61
RAB40B-202ENST00000538809 KIAA0825Q8IV33 1275 aa18.84■□□□□ 0.61
RAB40B-202ENST00000538809 SASH1O94885 1247 aa18.83■□□□□ 0.6
RAB40B-202ENST00000538809 HUNKP57058 714 aa18.83■□□□□ 0.6
RAB40B-202ENST00000538809 NBPF9Q3BBW0 867 aa18.83■□□□□ 0.6
RAB40B-202ENST00000538809 CDCA5Q96FF9 252 aa18.83■□□□□ 0.6
RAB40B-202ENST00000538809 USP44Q9H0E7 712 aa18.83■□□□□ 0.6
RAB40B-202ENST00000538809 GBA2Q9HCG7 927 aaPredicted RBP18.83■□□□□ 0.6
RAB40B-202ENST00000538809 JAG2Q9Y219 1238 aa18.83■□□□□ 0.6
RAB40B-202ENST00000538809 RARSP54136 660 aaKnown RBP18.82■□□□□ 0.6
RAB40B-202ENST00000538809 TNS4Q8IZW8 715 aa18.82■□□□□ 0.6
RAB40B-202ENST00000538809 OGFOD1Q8N543 542 aa18.82■□□□□ 0.6
RAB40B-202ENST00000538809 NOB1Q9ULX3 412 aaKnown RBP18.82■□□□□ 0.6
RAB40B-202ENST00000538809 PITPNM2Q9BZ72 1349 aa18.81■□□□□ 0.6
RAB40B-202ENST00000538809 MAP2K1Q02750 393 aaPredicted RBP18.81■□□□□ 0.6
RAB40B-202ENST00000538809 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
RAB40B-202ENST00000538809 CERS5Q8N5B7 392 aa18.81■□□□□ 0.6
RAB40B-202ENST00000538809 KLHDC4Q8TBB5 520 aa18.81■□□□□ 0.6
RAB40B-202ENST00000538809 HHIPL1Q96JK4 782 aa18.81■□□□□ 0.6
RAB40B-202ENST00000538809 CASP8AP2Q9UKL3 1982 aa18.81■□□□□ 0.6
RAB40B-202ENST00000538809 WNT10BO00744 389 aa18.8■□□□□ 0.6
RAB40B-202ENST00000538809 IL1R1P14778 569 aa18.8■□□□□ 0.6
RAB40B-202ENST00000538809 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
RAB40B-202ENST00000538809 C2orf69Q8N8R5 385 aa18.8■□□□□ 0.6
RAB40B-202ENST00000538809 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
RAB40B-202ENST00000538809 HSPA8P11142 646 aaKnown RBP18.79■□□□□ 0.6
RAB40B-202ENST00000538809 GYG1P46976 350 aa18.79■□□□□ 0.6
RAB40B-202ENST00000538809 LBX1P52954 281 aa18.79■□□□□ 0.6
RAB40B-202ENST00000538809 HDAC9Q9UKV0 1011 aa18.79■□□□□ 0.6
RAB40B-202ENST00000538809 MROH5Q6ZUA9 1318 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms