RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 MAST3O60307 1309 aa24.4■■□□□ 1.5
DDX55-205ENST00000538744 PTMSP20962 102 aa24.4■■□□□ 1.5
DDX55-205ENST00000538744 GSE1Q14687 1217 aa24.4■■□□□ 1.5
DDX55-205ENST00000538744 SF3B3Q15393 1217 aaKnown RBP24.4■■□□□ 1.5
DDX55-205ENST00000538744 BICDL1Q6ZP65 573 aa24.4■■□□□ 1.5
DDX55-205ENST00000538744 SMIM5Q71RC9 77 aa24.4■■□□□ 1.5
DDX55-205ENST00000538744 SRP68Q9UHB9 627 aaKnown RBP24.4■■□□□ 1.5
DDX55-205ENST00000538744 BRWD3Q6RI45 1802 aa24.39■■□□□ 1.5
DDX55-205ENST00000538744 ARID4AP29374 1257 aaPredicted RBP24.39■■□□□ 1.5
DDX55-205ENST00000538744 CCDC102BQ68D86 513 aa24.39■■□□□ 1.5
DDX55-205ENST00000538744 BLOC1S2Q6QNY1 142 aa24.39■■□□□ 1.5
DDX55-205ENST00000538744 SETDB2Q96T68 719 aa24.39■■□□□ 1.5
DDX55-205ENST00000538744 A0A1B0GUL6 1792 aa24.39■■□□□ 1.5
DDX55-205ENST00000538744 GTF2E1P29083 439 aaPredicted RBP24.38■■□□□ 1.49
DDX55-205ENST00000538744 TTF1Q15361 905 aaPredicted RBP24.38■■□□□ 1.49
DDX55-205ENST00000538744 SLFNL1Q499Z3 407 aa24.38■■□□□ 1.49
DDX55-205ENST00000538744 SLC10A5Q5PT55 438 aa24.38■■□□□ 1.49
DDX55-205ENST00000538744 ZSCAN31Q96LW9 406 aaPredicted RBP24.38■■□□□ 1.49
DDX55-205ENST00000538744 PHKA1P46020 1223 aa24.38■■□□□ 1.49
DDX55-205ENST00000538744 PI16Q6UXB8 463 aa24.38■■□□□ 1.49
DDX55-205ENST00000538744 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.38■■□□□ 1.497e-8■■□□□ 14.4
DDX55-205ENST00000538744 ARHGEF1Q92888 912 aaKnown RBP24.37■■□□□ 1.49
DDX55-205ENST00000538744 ALDH8A1Q9H2A2 487 aaPredicted RBP24.37■■□□□ 1.49
DDX55-205ENST00000538744 SH2B1Q9NRF2 756 aaPredicted RBP24.37■■□□□ 1.49
DDX55-205ENST00000538744 M0R2C6 588 aa24.36■■□□□ 1.49
DDX55-205ENST00000538744 RPS6KB1P23443 525 aa24.36■■□□□ 1.49
DDX55-205ENST00000538744 PKP1Q13835 747 aa24.36■■□□□ 1.49
DDX55-205ENST00000538744 ZSCAN25Q6NSZ9 544 aa24.36■■□□□ 1.49
DDX55-205ENST00000538744 TAF6LQ9Y6J9 622 aa24.36■■□□□ 1.49
DDX55-205ENST00000538744 COL4A1P02462 1669 aa24.36■■□□□ 1.49
DDX55-205ENST00000538744 ANKRD1Q15327 319 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 ANKRD18AQ8IVF6 992 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 APPBP2Q92624 585 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 OSBP2Q969R2 916 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 GOLGA6L22H0YM25 854 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 BAG4O95429 457 aaKnown RBP24.35■■□□□ 1.49
DDX55-205ENST00000538744 WASHC4Q2M389 1173 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 FAM196AQ6ZSG2 479 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 C3orf67Q6ZVT6 689 aa24.35■■□□□ 1.49
DDX55-205ENST00000538744 NBPF5PQ86XG9 351 aaPredicted RBP24.35■■□□□ 1.49
DDX55-205ENST00000538744 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.35■■□□□ 1.49
DDX55-205ENST00000538744 MYO5AQ9Y4I1 1855 aaKnown RBP24.34■■□□□ 1.49
DDX55-205ENST00000538744 CYP21A2P08686 494 aa24.34■■□□□ 1.49
DDX55-205ENST00000538744 HSPD1P10809 573 aaKnown RBP24.34■■□□□ 1.49
DDX55-205ENST00000538744 CHRNDQ07001 517 aa24.34■■□□□ 1.49
DDX55-205ENST00000538744 TRAPPC3LQ5T215 181 aa24.34■■□□□ 1.49
DDX55-205ENST00000538744 AMIGO3Q86WK7 504 aa24.34■■□□□ 1.49
DDX55-205ENST00000538744 ZDHHC9Q9Y397 364 aa24.34■■□□□ 1.49
DDX55-205ENST00000538744 LAMA4Q16363 1823 aa24.34■■□□□ 1.49
DDX55-205ENST00000538744 DOCK2Q92608 1830 aa24.34■■□□□ 1.49
DDX55-205ENST00000538744 TRAK2O60296 914 aa24.33■■□□□ 1.49
DDX55-205ENST00000538744 RFC4P35249 363 aa24.33■■□□□ 1.49
DDX55-205ENST00000538744 NEK1Q96PY6 1258 aa24.33■■□□□ 1.49
DDX55-205ENST00000538744 LARP6Q9BRS8 491 aaKnown RBP24.33■■□□□ 1.49
DDX55-205ENST00000538744 TAF1P21675 1872 aa24.33■■□□□ 1.49
DDX55-205ENST00000538744 UBR3Q6ZT12 1888 aa24.33■■□□□ 1.48
DDX55-205ENST00000538744 KRT27Q7Z3Y8 459 aa24.32■■□□□ 1.48
DDX55-205ENST00000538744 TPTE2Q6XPS3 522 aa24.32■■□□□ 1.48
DDX55-205ENST00000538744 LARGE1O95461 756 aa24.31■■□□□ 1.48
DDX55-205ENST00000538744 BRD1O95696 1058 aa24.31■■□□□ 1.48
DDX55-205ENST00000538744 ADRA2BP18089 450 aa24.31■■□□□ 1.48
DDX55-205ENST00000538744 NLRP3Q96P20 1036 aa24.31■■□□□ 1.48
DDX55-205ENST00000538744 PIH1D3Q9NQM4 214 aaKnown RBP24.31■■□□□ 1.48
DDX55-205ENST00000538744 LRRC4BQ9NT99 713 aa24.31■■□□□ 1.48
DDX55-205ENST00000538744 BSDC1Q9NW68 430 aaPredicted RBP24.31■■□□□ 1.48
DDX55-205ENST00000538744 PHF14O94880 888 aa24.3■■□□□ 1.48
DDX55-205ENST00000538744 ADD2P35612 726 aa24.3■■□□□ 1.48
DDX55-205ENST00000538744 SPATA5Q8NB90 893 aa24.3■■□□□ 1.48
DDX55-205ENST00000538744 SNAP23O00161 211 aa24.3■■□□□ 1.48
DDX55-205ENST00000538744 HMGB1P09429 215 aaKnown RBP24.29■■□□□ 1.48
DDX55-205ENST00000538744 COL9A3Q14050 684 aaPredicted RBP24.29■■□□□ 1.48
DDX55-205ENST00000538744 UBE3CQ15386 1083 aa24.29■■□□□ 1.48
DDX55-205ENST00000538744 SKOR2Q2VWA4 1001 aaPredicted RBP24.29■■□□□ 1.48
DDX55-205ENST00000538744 SLC27A3Q5K4L6 730 aa24.29■■□□□ 1.48
DDX55-205ENST00000538744 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
DDX55-205ENST00000538744 CTNNA3Q9UI47 895 aa24.29■■□□□ 1.48
DDX55-205ENST00000538744 TPCN1Q9ULQ1 816 aa24.29■■□□□ 1.48
DDX55-205ENST00000538744 SMC3Q9UQE7 1217 aa24.29■■□□□ 1.48
DDX55-205ENST00000538744 IDH1O75874 414 aaKnown RBP24.28■■□□□ 1.48
DDX55-205ENST00000538744 RASGRF1Q13972 1273 aa24.28■■□□□ 1.48
DDX55-205ENST00000538744 ME3Q16798 604 aa24.28■■□□□ 1.48
DDX55-205ENST00000538744 CCDC83Q8IWF9 413 aa24.28■■□□□ 1.48
DDX55-205ENST00000538744 PUS7LQ9H0K6 701 aaKnown RBP24.28■■□□□ 1.48
DDX55-205ENST00000538744 CARMIL3Q8ND23 1372 aa24.28■■□□□ 1.48
DDX55-205ENST00000538744 TOB2Q14106 344 aaPredicted RBP24.27■■□□□ 1.48
DDX55-205ENST00000538744 TCEANC2Q96MN5 208 aa24.27■■□□□ 1.48
DDX55-205ENST00000538744 GPAA1O43292 621 aa24.27■■□□□ 1.48
DDX55-205ENST00000538744 UBE4AQ14139 1066 aa24.27■■□□□ 1.48
DDX55-205ENST00000538744 STOX1Q6ZVD7 989 aa24.27■■□□□ 1.48
DDX55-205ENST00000538744 WDR33Q9C0J8 1336 aaKnown RBP24.26■■□□□ 1.47
DDX55-205ENST00000538744 PDE6AP16499 860 aa24.26■■□□□ 1.47
DDX55-205ENST00000538744 BCAMP50895 628 aa24.26■■□□□ 1.47
DDX55-205ENST00000538744 CELF1Q92879 486 aaKnown RBP24.26■■□□□ 1.47
DDX55-205ENST00000538744 TNRC6CQ9HCJ0 1690 aaKnown RBP24.25■■□□□ 1.47
DDX55-205ENST00000538744 MCTP1Q6DN14 999 aa24.25■■□□□ 1.47
DDX55-205ENST00000538744 MINPP1Q9UNW1 487 aa24.25■■□□□ 1.47
DDX55-205ENST00000538744 ZNF532Q9HCE3 1301 aa24.25■■□□□ 1.47
DDX55-205ENST00000538744 FOXP2O15409 715 aa24.24■■□□□ 1.47
DDX55-205ENST00000538744 TRIM37O94972 964 aa24.24■■□□□ 1.47
DDX55-205ENST00000538744 MAP3K12Q12852 859 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms