RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 GPR108Q9NPR9 543 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 FPGT-TNNI3KV9GXZ4 949 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 MYH13Q9UKX3 1938 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 LTBP3Q9NS15 1303 aa21.18■□□□□ 0.98
CLN6-202ENST00000538696 MED23Q9ULK4 1368 aa21.17■□□□□ 0.98
CLN6-202ENST00000538696 C6orf229H3BNL8 230 aa21.17■□□□□ 0.98
CLN6-202ENST00000538696 TAOK3Q9H2K8 898 aa21.17■□□□□ 0.98
CLN6-202ENST00000538696 COL4A5P29400 1685 aa21.17■□□□□ 0.98
CLN6-202ENST00000538696 A0A1B0GUL7 405 aa21.16■□□□□ 0.98
CLN6-202ENST00000538696 SUPT20HQ8NEM7 779 aa21.16■□□□□ 0.98
CLN6-202ENST00000538696 LPIN2Q92539 896 aa21.16■□□□□ 0.98
CLN6-202ENST00000538696 EAF2Q96CJ1 260 aaPredicted RBP21.16■□□□□ 0.98
CLN6-202ENST00000538696 AKAP2Q9Y2D5 859 aa21.16■□□□□ 0.98
CLN6-202ENST00000538696 CHD4Q14839 1912 aa21.15■□□□□ 0.98
CLN6-202ENST00000538696 TIAM2Q8IVF5 1701 aa21.15■□□□□ 0.98
CLN6-202ENST00000538696 SLC5A1P13866 664 aa21.15■□□□□ 0.98
CLN6-202ENST00000538696 ARHGAP27Q6ZUM4 889 aa21.15■□□□□ 0.98
CLN6-202ENST00000538696 TXNRD3Q86VQ6 643 aa21.15■□□□□ 0.98
CLN6-202ENST00000538696 ADORA1P30542 326 aa21.14■□□□□ 0.97
CLN6-202ENST00000538696 PRELPP51888 382 aa21.14■□□□□ 0.97
CLN6-202ENST00000538696 TIMM10P62072 90 aa21.14■□□□□ 0.97
CLN6-202ENST00000538696 C15orf52Q6ZUT6 534 aaKnown RBP21.14■□□□□ 0.97
CLN6-202ENST00000538696 AACSQ86V21 672 aa21.14■□□□□ 0.97
CLN6-202ENST00000538696 CLASRPQ8N2M8 674 aaKnown RBP21.14■□□□□ 0.97
CLN6-202ENST00000538696 EYA3Q99504 573 aa21.14■□□□□ 0.97
CLN6-202ENST00000538696 ZNF277Q9NRM2 450 aaPredicted RBP21.14■□□□□ 0.97
CLN6-202ENST00000538696 TLR7Q9NYK1 1049 aaKnown RBP21.14■□□□□ 0.97
CLN6-202ENST00000538696 ZNF646O15015 1829 aaPredicted RBP21.14■□□□□ 0.97
CLN6-202ENST00000538696 PSME4Q14997 1843 aa21.14■□□□□ 0.97
CLN6-202ENST00000538696 IFIT1P09914 478 aaKnown RBP21.13■□□□□ 0.97
CLN6-202ENST00000538696 BCL11AQ9H165 835 aa21.13■□□□□ 0.97
CLN6-202ENST00000538696 RIMBP2O15034 1052 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 KIAA2012Q0VF49 1180 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 AOC3Q16853 763 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 WASHC4Q2M389 1173 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 XAGE2Q96GT9 111 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 NEUROD6Q96NK8 337 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 DBNDD2Q9BQY9 259 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 CCDC8Q9H0W5 538 aaPredicted RBP21.12■□□□□ 0.97
CLN6-202ENST00000538696 ZBTB47Q9UFB7 747 aaPredicted RBP21.12■□□□□ 0.97
CLN6-202ENST00000538696 DBNLQ9UJU6 430 aaKnown RBP21.12■□□□□ 0.97
CLN6-202ENST00000538696 SCN9AQ15858 1988 aa21.12■□□□□ 0.97
CLN6-202ENST00000538696 PPIP5K2O43314 1243 aa21.11■□□□□ 0.97
CLN6-202ENST00000538696 GRIN3BO60391 1043 aa21.11■□□□□ 0.97
CLN6-202ENST00000538696 IARSP41252 1262 aaKnown RBP21.11■□□□□ 0.97
CLN6-202ENST00000538696 C16orf71Q8IYS4 520 aaPredicted RBP21.11■□□□□ 0.97
CLN6-202ENST00000538696 OTUD7AQ8TE49 926 aaPredicted RBP21.11■□□□□ 0.97
CLN6-202ENST00000538696 GOLGB1Q14789 3259 aaKnown RBP21.11■□□□□ 0.97
CLN6-202ENST00000538696 GYG1P46976 350 aa21.1■□□□□ 0.97
CLN6-202ENST00000538696 ZC3H12CQ9C0D7 883 aaKnown RBP21.1■□□□□ 0.97
CLN6-202ENST00000538696 AKAP11Q9UKA4 1901 aa21.1■□□□□ 0.97
CLN6-202ENST00000538696 FAM84BQ96KN1 310 aaPredicted RBP21.09■□□□□ 0.97
CLN6-202ENST00000538696 VPS33BQ9H267 617 aa21.09■□□□□ 0.97
CLN6-202ENST00000538696 IFIT2P09913 472 aaKnown RBP21.08■□□□□ 0.97
CLN6-202ENST00000538696 FBXO33Q7Z6M2 555 aa21.08■□□□□ 0.97
CLN6-202ENST00000538696 SALL3Q9BXA9 1300 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 PHKA1P46020 1223 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 BCAMP50895 628 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 DOK7Q18PE1 504 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 C8orf34Q49A92 452 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 CCDC102BQ68D86 513 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 ZNF804AQ7Z570 1209 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 PLEKHM2Q8IWE5 1019 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 LARGE2Q8N3Y3 721 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 BACH2Q9BYV9 841 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 DBNDD1Q9H9R9 158 aa21.07■□□□□ 0.96
CLN6-202ENST00000538696 COL1A1P02452 1464 aaPredicted RBP21.07■□□□□ 0.96
CLN6-202ENST00000538696 LMNB1P20700 586 aa21.06■□□□□ 0.96
CLN6-202ENST00000538696 HIBADHP31937 336 aaKnown RBP21.06■□□□□ 0.96
CLN6-202ENST00000538696 CAVIN4Q5BKX8 364 aa21.06■□□□□ 0.96
CLN6-202ENST00000538696 COA1Q9GZY4 146 aa21.06■□□□□ 0.96
CLN6-202ENST00000538696 ECE2O60344 883 aa21.05■□□□□ 0.96
CLN6-202ENST00000538696 GORABQ5T7V8 394 aa21.05■□□□□ 0.96
CLN6-202ENST00000538696 CD209Q9NNX6 404 aa21.05■□□□□ 0.96
CLN6-202ENST00000538696 IL1R1P14778 569 aa21.04■□□□□ 0.96
CLN6-202ENST00000538696 ARID4AP29374 1257 aaPredicted RBP21.04■□□□□ 0.96
CLN6-202ENST00000538696 TTC39AQ5SRH9 613 aa21.04■□□□□ 0.96
CLN6-202ENST00000538696 VPS37DQ86XT2 251 aa21.04■□□□□ 0.96
CLN6-202ENST00000538696 NIM1KQ8IY84 436 aa21.04■□□□□ 0.96
CLN6-202ENST00000538696 RNF181Q9P0P0 153 aa21.04■□□□□ 0.96
CLN6-202ENST00000538696 IQSEC3Q9UPP2 1182 aaPredicted RBP21.04■□□□□ 0.96
CLN6-202ENST00000538696 MYO5AQ9Y4I1 1855 aaKnown RBP21.03■□□□□ 0.96
CLN6-202ENST00000538696 YDJCA8MPS7 323 aa21.03■□□□□ 0.96
CLN6-202ENST00000538696 G3V3G9 751 aa21.03■□□□□ 0.96
CLN6-202ENST00000538696 MX1P20591 662 aa21.03■□□□□ 0.96
CLN6-202ENST00000538696 CCDC158Q5M9N0 1113 aa21.03■□□□□ 0.96
CLN6-202ENST00000538696 DCAF8Q5TAQ9 597 aa21.03■□□□□ 0.96
CLN6-202ENST00000538696 TSHZ3Q63HK5 1081 aa21.03■□□□□ 0.96
CLN6-202ENST00000538696 TDRD7Q8NHU6 1098 aaKnown RBP21.03■□□□□ 0.96
CLN6-202ENST00000538696 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.95
CLN6-202ENST00000538696 UQCRFS1P1P0C7P4 283 aa21.02■□□□□ 0.95
CLN6-202ENST00000538696 SCARF1Q14162 830 aa21.02■□□□□ 0.95
CLN6-202ENST00000538696 C9orf131Q5VYM1 1079 aa21.02■□□□□ 0.95
CLN6-202ENST00000538696 ZNF512BQ96KM6 892 aaPredicted RBP21.02■□□□□ 0.95
CLN6-202ENST00000538696 ECHDC1Q9NTX5 307 aa21.02■□□□□ 0.95
CLN6-202ENST00000538696 DOCK2Q92608 1830 aa21.02■□□□□ 0.95
CLN6-202ENST00000538696 ZBTB22O15209 634 aa21.01■□□□□ 0.95
CLN6-202ENST00000538696 RASGRF1Q13972 1273 aa21.01■□□□□ 0.95
CLN6-202ENST00000538696 BMP2KLQ5H9B9 411 aa21.01■□□□□ 0.95
CLN6-202ENST00000538696 TTC22Q5TAA0 569 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms