RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 RTCBQ9Y3I0 505 aaKnown RBP6.52□□□□□ -1.37
LINC02408-202ENST00000538573 RREB1Q92766 1687 aa6.52□□□□□ -1.37
LINC02408-202ENST00000538573 ARFGEF2Q9Y6D5 1785 aa6.52□□□□□ -1.37
LINC02408-202ENST00000538573 MAP3K15Q6ZN16 1313 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 C4BP0C0L5 1744 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 TNS1Q9HBL0 1735 aaKnown RBP6.51□□□□□ -1.37
LINC02408-202ENST00000538573 A0A087WZG4 1122 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 ALDH1L1O75891 902 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 CD2BP2O95400 341 aaKnown RBP6.51□□□□□ -1.37
LINC02408-202ENST00000538573 FMNL1O95466 1100 aaPredicted RBP6.51□□□□□ -1.37
LINC02408-202ENST00000538573 FECHP22830 423 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 BAG6P46379 1132 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 FOXC1Q12948 553 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 AAMPQ13685 434 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 CWF19L2Q2TBE0 894 aaKnown RBP6.51□□□□□ -1.37
LINC02408-202ENST00000538573 B4GALNT3Q6L9W6 998 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 TRIM67Q6ZTA4 783 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 SMIM5Q71RC9 77 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 LINS1Q8NG48 757 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 ZBTB40Q9NUA8 1239 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 C9orf78Q9NZ63 289 aaPredicted RBP6.51□□□□□ -1.37
LINC02408-202ENST00000538573 PXDNLA1KZ92 1463 aa6.51□□□□□ -1.37
LINC02408-202ENST00000538573 NUP188Q5SRE5 1749 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 NUP98P52948 1817 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 AFDNP55196 1824 aaKnown RBP6.5□□□□□ -1.37
LINC02408-202ENST00000538573 COL15A1P39059 1388 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 NEURL1BA8MQ27 555 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 ERVV-1B6SEH8 477 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 ZBTB24O43167 697 aaPredicted RBP6.5□□□□□ -1.37
LINC02408-202ENST00000538573 IGKV5-2P06315 115 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 GNAI3P08754 354 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 UBTFL1P0CB47 393 aaPredicted RBP6.5□□□□□ -1.37
LINC02408-202ENST00000538573 RFC4P35249 363 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 FUT2Q10981 343 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 TCIRG1Q13488 830 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 EZH2Q15910 746 aaKnown RBP6.5□□□□□ -1.37
LINC02408-202ENST00000538573 HLFQ16534 295 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 TRAPPC3LQ5T215 181 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 GIGYF2Q6Y7W6 1299 aaKnown RBP6.5□□□□□ -1.37
LINC02408-202ENST00000538573 CCDC125Q86Z20 511 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 GPIHBP1Q8IV16 184 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 EMID1Q96A84 441 aaPredicted RBP6.5□□□□□ -1.37
LINC02408-202ENST00000538573 MEIS3Q99687 375 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 USP44Q9H0E7 712 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 C1orf115Q9H7X2 142 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 ATP10DQ9P241 1426 aa6.5□□□□□ -1.37
LINC02408-202ENST00000538573 N4BP2Q86UW6 1770 aaPredicted RBP6.49□□□□□ -1.37
LINC02408-202ENST00000538573 CAMTA2O94983 1202 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 GNAI2P04899 355 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 NBPF7P0C2Y1 421 aaPredicted RBP6.49□□□□□ -1.37
LINC02408-202ENST00000538573 GPTP24298 496 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 GCKRQ14397 625 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 TPRNQ4KMQ1 711 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 HSP90AB3PQ58FF7 597 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 TREML4Q6UXN2 200 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 DEFB132Q7Z7B7 95 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 AMIGO3Q86WK7 504 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 NLRP7Q8WX94 980 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 JARID2Q92833 1246 aaPredicted RBP6.49□□□□□ -1.37
LINC02408-202ENST00000538573 CAMKK2Q96RR4 588 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 CWC25Q9NXE8 425 aaPredicted RBP6.49□□□□□ -1.37
LINC02408-202ENST00000538573 TFCP2L1Q9NZI6 479 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 NARFQ9UHQ1 456 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 ZNF652Q9Y2D9 606 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 PCDHB15Q9Y5E8 787 aa6.49□□□□□ -1.37
LINC02408-202ENST00000538573 UBR3Q6ZT12 1888 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 FAM177BA6PVY3 158 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 GRM8O00222 908 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 GDF9O60383 454 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 GCGRP47871 477 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 RTL5Q5HYW3 569 aaPredicted RBP6.48□□□□□ -1.37
LINC02408-202ENST00000538573 MORN1Q5T089 497 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 USPL1Q5W0Q7 1092 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 BICDL1Q6ZP65 573 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 UBE3BQ7Z3V4 1068 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 CCDC191Q8NCU4 936 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 ISCA1Q9BUE6 129 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 RWDD1Q9H446 243 aaPredicted RBP6.48□□□□□ -1.37
LINC02408-202ENST00000538573 SRP68Q9UHB9 627 aaKnown RBP6.48□□□□□ -1.37
LINC02408-202ENST00000538573 HDAC5Q9UQL6 1122 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC02408-202ENST00000538573 LRRFIP2Q9Y608 721 aaKnown RBP6.48□□□□□ -1.37
LINC02408-202ENST00000538573 RGPD3A6NKT7 1758 aaPredicted RBP6.48□□□□□ -1.37
LINC02408-202ENST00000538573 ANKRD36CQ5JPF3 1778 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 RGPD4Q7Z3J3 1758 aa6.48□□□□□ -1.37
LINC02408-202ENST00000538573 H7C1W4 665 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 IGHDP01880 384 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 SSFA2P28290 1259 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 RPIAP49247 311 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 TRIM28Q13263 835 aaKnown RBP6.47□□□□□ -1.37
LINC02408-202ENST00000538573 ZNF827Q17R98 1081 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 PLA2G2CQ5R387 149 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 CLEC4GQ6UXB4 293 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 NLRP10Q86W26 655 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 RPAP2Q8IXW5 612 aaPredicted RBP6.47□□□□□ -1.37
LINC02408-202ENST00000538573 ZNF34Q8IZ26 560 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 STK32BQ9NY57 414 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 STK17AQ9UEE5 414 aa6.47□□□□□ -1.37
LINC02408-202ENST00000538573 TRMT112Q9UI30 125 aaKnown RBP6.47□□□□□ -1.37
LINC02408-202ENST00000538573 SLC27A5Q9Y2P5 690 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms