RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
DDB1-212ENST00000538470 VAMP4O75379 141 aa11.02□□□□□ -0.65
DDB1-212ENST00000538470 CSF1RP07333 972 aa11.02□□□□□ -0.65
DDB1-212ENST00000538470 ITGA6P23229 1130 aa11.02□□□□□ -0.65
DDB1-212ENST00000538470 MMP14P50281 582 aa11.02□□□□□ -0.65
DDB1-212ENST00000538470 CCT4P50991 539 aaKnown RBP11.02□□□□□ -0.65
DDB1-212ENST00000538470 HUNKP57058 714 aa11.02□□□□□ -0.65
DDB1-212ENST00000538470 GMLQ99445 158 aa11.02□□□□□ -0.65
DDB1-212ENST00000538470 COA1Q9GZY4 146 aa11.02□□□□□ -0.65
DDB1-212ENST00000538470 GBA2Q9HCG7 927 aaPredicted RBP11.02□□□□□ -0.65
DDB1-212ENST00000538470 ADM5C9JUS6 153 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 AOC2O75106 756 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 EXOSC9Q06265 439 aaKnown RBP11.01□□□□□ -0.65
DDB1-212ENST00000538470 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 RBM26Q5T8P6 1007 aaKnown RBP11.01□□□□□ -0.65
DDB1-212ENST00000538470 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 C2orf69Q8N8R5 385 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 MPHOSPH8Q99549 860 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 MYOZ2Q9NPC6 264 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 CASP8AP2Q9UKL3 1982 aa11.01□□□□□ -0.65
DDB1-212ENST00000538470 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
DDB1-212ENST00000538470 ANKRD18BA2A2Z9 1011 aa11□□□□□ -0.65
DDB1-212ENST00000538470 FKBP1BP68106 108 aa11□□□□□ -0.65
DDB1-212ENST00000538470 STRIP1Q5VSL9 837 aa11□□□□□ -0.65
DDB1-212ENST00000538470 CCDC102AQ96A19 550 aa11□□□□□ -0.65
DDB1-212ENST00000538470 CDCA5Q96FF9 252 aa11□□□□□ -0.65
DDB1-212ENST00000538470 ZNF804BA4D1E1 1349 aa11□□□□□ -0.65
DDB1-212ENST00000538470 LAMB1P07942 1786 aa11□□□□□ -0.65
DDB1-212ENST00000538470 SCARF1Q14162 830 aa10.99□□□□□ -0.65
DDB1-212ENST00000538470 DACT2Q5SW24 774 aa10.99□□□□□ -0.65
DDB1-212ENST00000538470 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
DDB1-212ENST00000538470 ANGEL2Q5VTE6 544 aaKnown RBP10.99□□□□□ -0.65
DDB1-212ENST00000538470 OGFOD1Q8N543 542 aa10.99□□□□□ -0.65
DDB1-212ENST00000538470 SAGE1Q9NXZ1 904 aa10.99□□□□□ -0.65
DDB1-212ENST00000538470 FAM155AB1AL88 458 aaPredicted RBP10.98□□□□□ -0.65
DDB1-212ENST00000538470 SLC10A3P09131 477 aa10.98□□□□□ -0.65
DDB1-212ENST00000538470 KCNJ4P48050 445 aa10.98□□□□□ -0.65
DDB1-212ENST00000538470 C15orf52Q6ZUT6 534 aaKnown RBP10.98□□□□□ -0.65
DDB1-212ENST00000538470 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
DDB1-212ENST00000538470 ASTN2O75129 1339 aaPredicted RBP10.98□□□□□ -0.65
DDB1-212ENST00000538470 GRM8O00222 908 aa10.97□□□□□ -0.65
DDB1-212ENST00000538470 ALDH1L1O75891 902 aa10.97□□□□□ -0.65
DDB1-212ENST00000538470 ZNF157P51786 506 aaPredicted RBP10.97□□□□□ -0.65
DDB1-212ENST00000538470 FOXO4P98177 505 aa10.97□□□□□ -0.65
DDB1-212ENST00000538470 CHRNDQ07001 517 aa10.97□□□□□ -0.65
DDB1-212ENST00000538470 IFIT5Q13325 482 aaKnown RBP10.97□□□□□ -0.65
DDB1-212ENST00000538470 REM2Q8IYK8 340 aaPredicted RBP10.97□□□□□ -0.65
DDB1-212ENST00000538470 ABHD8Q96I13 439 aa10.97□□□□□ -0.65
DDB1-212ENST00000538470 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
DDB1-212ENST00000538470 HDAC9Q9UKV0 1011 aa10.97□□□□□ -0.65
DDB1-212ENST00000538470 ZNF521Q96K83 1311 aa10.97□□□□□ -0.65
DDB1-212ENST00000538470 IRS2Q9Y4H2 1338 aa10.96□□□□□ -0.65
DDB1-212ENST00000538470 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
DDB1-212ENST00000538470 F6X3S4 739 aa10.96□□□□□ -0.65
DDB1-212ENST00000538470 DLK2Q6UY11 383 aa10.96□□□□□ -0.65
DDB1-212ENST00000538470 TXNRD3Q86VQ6 643 aa10.96□□□□□ -0.65
DDB1-212ENST00000538470 APOBEC3FQ8IUX4 373 aaKnown RBP10.96□□□□□ -0.65
DDB1-212ENST00000538470 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
DDB1-212ENST00000538470 FBXW7Q969H0 707 aa10.96□□□□□ -0.65
DDB1-212ENST00000538470 WNT10BO00744 389 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 KLRK1P26718 216 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 NF2P35240 595 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 CCDC57Q2TAC2 916 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 RASAL3Q86YV0 1011 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 SRCIN1Q9C0H9 1055 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 MYH13Q9UKX3 1938 aa10.95□□□□□ -0.66
DDB1-212ENST00000538470 FKBP1AP62942 108 aaKnown RBP10.94□□□□□ -0.66
DDB1-212ENST00000538470 GTF2IP78347 998 aa10.94□□□□□ -0.66
DDB1-212ENST00000538470 KIF23Q02241 960 aaPredicted RBP10.94□□□□□ -0.66
DDB1-212ENST00000538470 NBPF9Q3BBW0 867 aa10.94□□□□□ -0.66
DDB1-212ENST00000538470 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
DDB1-212ENST00000538470 LMBR1LQ6UX01 489 aa10.94□□□□□ -0.66
DDB1-212ENST00000538470 ZIC5Q96T25 663 aa10.94□□□□□ -0.66
DDB1-212ENST00000538470 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
DDB1-212ENST00000538470 CD209Q9NNX6 404 aa10.94□□□□□ -0.66
DDB1-212ENST00000538470 C9orf78Q9NZ63 289 aaPredicted RBP10.94□□□□□ -0.66
DDB1-212ENST00000538470 UTYO14607 1347 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 PTPRCP08575 1304 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 E9PSI1 815 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 SASH1O94885 1247 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 IL1R1P14778 569 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 KIAA0825Q8IV33 1275 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 MTMR14Q8NCE2 650 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 ZBED3Q96IU2 234 aaPredicted RBP10.93□□□□□ -0.66
DDB1-212ENST00000538470 PPP2R3BQ9Y5P8 575 aa10.93□□□□□ -0.66
DDB1-212ENST00000538470 OTOFQ9HC10 1997 aa10.92□□□□□ -0.66
DDB1-212ENST00000538470 TAF5LO75529 589 aa10.92□□□□□ -0.66
DDB1-212ENST00000538470 EPHA10Q5JZY3 1008 aa10.92□□□□□ -0.66
DDB1-212ENST00000538470 SLC4A10Q6U841 1118 aa10.92□□□□□ -0.66
DDB1-212ENST00000538470 LDHAL6AQ6ZMR3 332 aa10.92□□□□□ -0.66
DDB1-212ENST00000538470 MCOLN1Q9GZU1 580 aa10.92□□□□□ -0.66
DDB1-212ENST00000538470 CNNM1Q9NRU3 951 aa10.92□□□□□ -0.66
DDB1-212ENST00000538470 DGKZQ13574 1117 aa10.91□□□□□ -0.66
DDB1-212ENST00000538470 UBE4AQ14139 1066 aa10.91□□□□□ -0.66
DDB1-212ENST00000538470 DLGAP5Q15398 846 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms