RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MTIF2P46199 727 aaKnown RBP6.16□□□□□ -1.42
LRP6-203ENST00000538239 STXBP4Q6ZWJ1 553 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 VSIG10Q8N0Z9 540 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 TMTC2Q8N394 836 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 CCDC148Q8NFR7 591 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 ERMNQ8TAM6 284 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 TAF4BQ92750 862 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 SCAND2PQ9GZW5 306 aaPredicted RBP6.16□□□□□ -1.42
LRP6-203ENST00000538239 ARMT1Q9H993 441 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 AATFQ9NY61 560 aaKnown RBP eCLIP6.16□□□□□ -1.42
LRP6-203ENST00000538239 A0A1B0GUL7 405 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 KIF20AO95235 890 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 SSFA2P28290 1259 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 CCDC191Q8NCU4 936 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 ADGRL2O95490 1459 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 GCC2Q8IWJ2 1684 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 BMP2KLQ5H9B9 411 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 CPLX3Q8WVH0 158 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 ERCC4Q92889 916 aaPredicted RBP6.16□□□□□ -1.42
LRP6-203ENST00000538239 RTL9Q8NET4 1388 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 MAP3K9P80192 1104 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 SAMD9LQ8IVG5 1584 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 KDM6BO15054 1643 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 GNAQP50148 359 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 DNA2P51530 1060 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 TRAF1Q13077 416 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 SPA17Q15506 151 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 FAM212AQ96EL1 285 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 CCDC97Q96F63 343 aaPredicted RBP6.16□□□□□ -1.42
LRP6-203ENST00000538239 XAGE2Q96GT9 111 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 ESYT1Q9BSJ8 1104 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 EXOC1Q9NV70 894 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 ANO10Q9NW15 660 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 PLXNC1O60486 1568 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 HECW2Q9P2P5 1572 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 NLRP1Q9C000 1473 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 B4DLN1 442 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 STX6O43752 255 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 MRPL12P52815 198 aaKnown RBP6.16□□□□□ -1.42
LRP6-203ENST00000538239 CIZ1Q9ULV3 898 aaPredicted RBP6.16□□□□□ -1.42
LRP6-203ENST00000538239 PCDHB15Q9Y5E8 787 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 TTC6Q86TZ1 520 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 ZNF526Q8TF50 670 aaPredicted RBP6.15□□□□□ -1.42
LRP6-203ENST00000538239 NUP88Q99567 741 aaPredicted RBP6.15□□□□□ -1.42
LRP6-203ENST00000538239 C6orf50Q9HD87 102 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 ERVV-2B6SEH9 535 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 PARP1P09874 1014 aaKnown RBP6.15□□□□□ -1.42
LRP6-203ENST00000538239 AFMP43652 599 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 TDRD12Q587J7 1177 aaKnown RBP6.15□□□□□ -1.42
LRP6-203ENST00000538239 CCDC129Q6ZRS4 1044 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 ZNF496Q96IT1 587 aaPredicted RBP6.15□□□□□ -1.42
LRP6-203ENST00000538239 CENPHQ9H3R5 247 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 USP19O94966 1318 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 METP08581 1390 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 STAT6P42226 847 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 HDAC1Q13547 482 aaPredicted RBP6.15□□□□□ -1.42
LRP6-203ENST00000538239 PLEKHG1Q9ULL1 1385 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 ABCA8O94911 1581 aa6.15□□□□□ -1.42
LRP6-203ENST00000538239 NBPF7P0C2Y1 421 aaPredicted RBP6.15□□□□□ -1.43
LRP6-203ENST00000538239 PHKG2P15735 406 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 KCNQ4P56696 695 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 APOBRQ0VD83 1088 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 MAGI3Q5TCQ9 1506 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 KRT27Q7Z3Y8 459 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 KIAA0232Q92628 1395 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 TMX1Q9H3N1 280 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 EYA2O00167 538 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 DOK7Q18PE1 504 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 CCDC183Q5T5S1 534 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 CCDC174Q6PII3 467 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 CTNNBL1Q8WYA6 563 aaPredicted RBP6.15□□□□□ -1.43
LRP6-203ENST00000538239 H7C1D1 291 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 CETN1Q12798 172 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 SUCLG2Q96I99 432 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 ARHGEF10LQ9HCE6 1279 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 KDM5CP41229 1560 aa6.15□□□□□ -1.43
LRP6-203ENST00000538239 KIF1BO60333 1816 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 MAST3O60307 1309 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 TTC41PQ6P2S7 1318 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 KCNQ3O43525 872 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 ANAPC15P60006 121 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 FAM193AP78312 1265 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 TCIRG1Q13488 830 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 TNNI3KQ59H18 835 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 SH2D4AQ9H788 454 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 FPGT-TNNI3KV9GXZ4 949 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 ARHGEF5Q12774 1597 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 MACROD2A1Z1Q3 448 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 MCM4P33991 863 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 AXDND1Q5T1B0 1012 aaPredicted RBP6.14□□□□□ -1.43
LRP6-203ENST00000538239 CCDC171Q6TFL3 1326 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 PHACTR2O75167 634 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 KRT2P35908 639 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 CETN2P41208 172 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 RBM25P49756 843 aaKnown RBP6.14□□□□□ -1.43
LRP6-203ENST00000538239 AKNAD1Q5T1N1 836 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 VPS36Q86VN1 386 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 BACH1O14867 736 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 ARHGAP29Q52LW3 1261 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 USPL1Q5W0Q7 1092 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms