RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.61
LRRK1-211ENST00000538064 FOXN1O15353 648 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 KLRK1P26718 216 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 EPHA10Q5JZY3 1008 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 RBM26Q5T8P6 1007 aaKnown RBP18.88■□□□□ 0.61
LRRK1-211ENST00000538064 LMBR1LQ6UX01 489 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 PAXIP1Q6ZW49 1069 aaPredicted RBP18.88■□□□□ 0.61
LRRK1-211ENST00000538064 KRT26Q7Z3Y9 468 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 SAPCD2Q86UD0 394 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 USP48Q86UV5 1035 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 TXNRD3Q86VQ6 643 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 MIER1Q8N108 512 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 AIDAQ96BJ3 306 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 HHIPL1Q96JK4 782 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 ZNF408Q9H9D4 720 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 WBP1LQ9NX94 342 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 GGA3Q9NZ52 723 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 PTPRCP08575 1304 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 ARAP2Q8WZ64 1704 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 ECM29Q5VYK3 1845 aa18.88■□□□□ 0.61
LRRK1-211ENST00000538064 USP17L8P0C7I0 530 aa18.87■□□□□ 0.61
LRRK1-211ENST00000538064 KCNJ4P48050 445 aa18.87■□□□□ 0.61
LRRK1-211ENST00000538064 DACT2Q5SW24 774 aa18.87■□□□□ 0.61
LRRK1-211ENST00000538064 CYP4F22Q6NT55 531 aa18.87■□□□□ 0.61
LRRK1-211ENST00000538064 MYO3BQ8WXR4 1341 aa18.87■□□□□ 0.61
LRRK1-211ENST00000538064 DCPSQ96C86 337 aaKnown RBP18.87■□□□□ 0.61
LRRK1-211ENST00000538064 UTYO14607 1347 aa18.86■□□□□ 0.61
LRRK1-211ENST00000538064 IRS2Q9Y4H2 1338 aa18.86■□□□□ 0.61
LRRK1-211ENST00000538064 ADM5C9JUS6 153 aa18.86■□□□□ 0.61
LRRK1-211ENST00000538064 STRIP1Q5VSL9 837 aa18.86■□□□□ 0.61
LRRK1-211ENST00000538064 SSH1Q8WYL5 1049 aa18.86■□□□□ 0.61
LRRK1-211ENST00000538064 ASTN2O75129 1339 aaPredicted RBP18.85■□□□□ 0.61
LRRK1-211ENST00000538064 MAP2K1Q02750 393 aaPredicted RBP18.85■□□□□ 0.61
LRRK1-211ENST00000538064 CCDC57Q2TAC2 916 aa18.85■□□□□ 0.61
LRRK1-211ENST00000538064 C15orf52Q6ZUT6 534 aaKnown RBP18.85■□□□□ 0.61
LRRK1-211ENST00000538064 SUCLG2Q96I99 432 aa18.85■□□□□ 0.61
LRRK1-211ENST00000538064 MYOZ2Q9NPC6 264 aa18.85■□□□□ 0.61
LRRK1-211ENST00000538064 PAPPA2Q9BXP8 1791 aa18.85■□□□□ 0.61
LRRK1-211ENST00000538064 PITPNM2Q9BZ72 1349 aa18.84■□□□□ 0.61
LRRK1-211ENST00000538064 CTCFP49711 727 aaPredicted RBP18.84■□□□□ 0.61
LRRK1-211ENST00000538064 ALDH1L2Q3SY69 923 aa18.84■□□□□ 0.61
LRRK1-211ENST00000538064 TAF7LQ5H9L4 462 aa18.84■□□□□ 0.61
LRRK1-211ENST00000538064 SULF1Q8IWU6 871 aa18.84■□□□□ 0.61
LRRK1-211ENST00000538064 TNS4Q8IZW8 715 aa18.84■□□□□ 0.61
LRRK1-211ENST00000538064 TAF5LO75529 589 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.6
LRRK1-211ENST00000538064 GRM1Q13255 1194 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 SCARF1Q14162 830 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 ANGEL2Q5VTE6 544 aaKnown RBP18.83■□□□□ 0.6
LRRK1-211ENST00000538064 DLK2Q6UY11 383 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 TRMT2AQ8IZ69 625 aaKnown RBP18.83■□□□□ 0.6
LRRK1-211ENST00000538064 FBXW7Q969H0 707 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 CDCA7LQ96GN5 454 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 KAZALD1Q96I82 304 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.6
LRRK1-211ENST00000538064 MMP14P50281 582 aa18.82■□□□□ 0.6
LRRK1-211ENST00000538064 ZNF594Q96JF6 807 aaPredicted RBP18.82■□□□□ 0.6
LRRK1-211ENST00000538064 MXD3Q9BW11 206 aa18.82■□□□□ 0.6
LRRK1-211ENST00000538064 GBA2Q9HCG7 927 aaPredicted RBP18.82■□□□□ 0.6
LRRK1-211ENST00000538064 SNAP23O00161 211 aa18.81■□□□□ 0.6
LRRK1-211ENST00000538064 MAP2K2P36507 400 aa18.81■□□□□ 0.6
LRRK1-211ENST00000538064 RABL6Q3YEC7 729 aaPredicted RBP18.81■□□□□ 0.6
LRRK1-211ENST00000538064 LDHAL6AQ6ZMR3 332 aa18.81■□□□□ 0.6
LRRK1-211ENST00000538064 OGFOD1Q8N543 542 aa18.81■□□□□ 0.6
LRRK1-211ENST00000538064 HELBQ8NG08 1087 aaPredicted RBP18.81■□□□□ 0.6
LRRK1-211ENST00000538064 CD209Q9NNX6 404 aa18.81■□□□□ 0.6
LRRK1-211ENST00000538064 CNNM1Q9NRU3 951 aa18.81■□□□□ 0.6
LRRK1-211ENST00000538064 AOC2O75106 756 aa18.8■□□□□ 0.6
LRRK1-211ENST00000538064 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
LRRK1-211ENST00000538064 HSPA8P11142 646 aaKnown RBP18.8■□□□□ 0.6
LRRK1-211ENST00000538064 HUNKP57058 714 aa18.8■□□□□ 0.6
LRRK1-211ENST00000538064 TTLL5Q6EMB2 1281 aa18.8■□□□□ 0.6
LRRK1-211ENST00000538064 ZNF804AQ7Z570 1209 aa18.8■□□□□ 0.6
LRRK1-211ENST00000538064 CDCA5Q96FF9 252 aa18.8■□□□□ 0.6
LRRK1-211ENST00000538064 BICC1Q9H694 974 aaKnown RBP18.8■□□□□ 0.6
LRRK1-211ENST00000538064 SMC4Q9NTJ3 1288 aa18.8■□□□□ 0.6
LRRK1-211ENST00000538064 GTF2IP78347 998 aa18.79■□□□□ 0.6
LRRK1-211ENST00000538064 ANKRD44Q8N8A2 993 aa18.79■□□□□ 0.6
LRRK1-211ENST00000538064 C2orf69Q8N8R5 385 aa18.79■□□□□ 0.6
LRRK1-211ENST00000538064 IL1R1P14778 569 aa18.78■□□□□ 0.6
LRRK1-211ENST00000538064 MYH13Q9UKX3 1938 aa18.78■□□□□ 0.6
LRRK1-211ENST00000538064 AKAP11Q9UKA4 1901 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 WNT10BO00744 389 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 LBX1P52954 281 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 BRPF1P55201 1214 aaPredicted RBP18.77■□□□□ 0.6
LRRK1-211ENST00000538064 NOGQ13253 232 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 NBPF9Q3BBW0 867 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 KIAA0825Q8IV33 1275 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 BEGAINQ9BUH8 593 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 HDAC9Q9UKV0 1011 aa18.77■□□□□ 0.6
LRRK1-211ENST00000538064 COL1A1P02452 1464 aaPredicted RBP18.77■□□□□ 0.59
LRRK1-211ENST00000538064 PLIN1O60240 522 aa18.76■□□□□ 0.59
LRRK1-211ENST00000538064 FKBP1AP62942 108 aaKnown RBP18.76■□□□□ 0.59
LRRK1-211ENST00000538064 UBE4AQ14139 1066 aa18.76■□□□□ 0.59
LRRK1-211ENST00000538064 RGMBQ6NW40 437 aa18.76■□□□□ 0.59
LRRK1-211ENST00000538064 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
LRRK1-211ENST00000538064 MROH5Q6ZUA9 1318 aa18.75■□□□□ 0.59
LRRK1-211ENST00000538064 SASH1O94885 1247 aa18.75■□□□□ 0.59
LRRK1-211ENST00000538064 FKBP1BP68106 108 aa18.75■□□□□ 0.59
LRRK1-211ENST00000538064 CERS5Q8N5B7 392 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms