RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 EXOSC9Q06265 439 aaKnown RBP12.35□□□□□ -0.43
CHD4-207ENST00000537634 NOGQ13253 232 aa12.35□□□□□ -0.43
CHD4-207ENST00000537634 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
CHD4-207ENST00000537634 LINS1Q8NG48 757 aa12.35□□□□□ -0.43
CHD4-207ENST00000537634 PLA2G12BQ9BX93 195 aa12.35□□□□□ -0.43
CHD4-207ENST00000537634 ITGA6P23229 1130 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 SCARF1Q14162 830 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 ANGEL2Q5VTE6 544 aaKnown RBP12.34□□□□□ -0.43
CHD4-207ENST00000537634 RGMBQ6NW40 437 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 GMLQ99445 158 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 TSKSQ9UJT2 592 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 LEMD3Q9Y2U8 911 aa12.34□□□□□ -0.43
CHD4-207ENST00000537634 ASTN2O75129 1339 aaPredicted RBP12.34□□□□□ -0.43
CHD4-207ENST00000537634 ZNF646O15015 1829 aaPredicted RBP12.33□□□□□ -0.44
CHD4-207ENST00000537634 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
CHD4-207ENST00000537634 CASP7P55210 303 aa12.33□□□□□ -0.44
CHD4-207ENST00000537634 CDCA5Q96FF9 252 aa12.33□□□□□ -0.44
CHD4-207ENST00000537634 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
CHD4-207ENST00000537634 COA1Q9GZY4 146 aa12.33□□□□□ -0.44
CHD4-207ENST00000537634 ZNF804BA4D1E1 1349 aa12.33□□□□□ -0.44
CHD4-207ENST00000537634 MYO3BQ8WXR4 1341 aa12.33□□□□□ -0.44
CHD4-207ENST00000537634 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 CSF1RP07333 972 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 KCNJ4P48050 445 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 ZNF157P51786 506 aaPredicted RBP12.32□□□□□ -0.44
CHD4-207ENST00000537634 FAM9BQ8IZU0 186 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 CHMP3Q9Y3E7 222 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 PITPNM2Q9BZ72 1349 aa12.32□□□□□ -0.44
CHD4-207ENST00000537634 A0A1B0GUL6 1792 aa12.31□□□□□ -0.44
CHD4-207ENST00000537634 PAPPA2Q9BXP8 1791 aa12.31□□□□□ -0.44
CHD4-207ENST00000537634 F6X3S4 739 aa12.31□□□□□ -0.44
CHD4-207ENST00000537634 DACT2Q5SW24 774 aa12.31□□□□□ -0.44
CHD4-207ENST00000537634 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
CHD4-207ENST00000537634 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
CHD4-207ENST00000537634 FAM155AB1AL88 458 aaPredicted RBP12.3□□□□□ -0.44
CHD4-207ENST00000537634 CHRNDQ07001 517 aa12.3□□□□□ -0.44
CHD4-207ENST00000537634 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
CHD4-207ENST00000537634 BEND3Q5T5X7 828 aa12.3□□□□□ -0.44
CHD4-207ENST00000537634 TXNRD3Q86VQ6 643 aa12.3□□□□□ -0.44
CHD4-207ENST00000537634 ZIC5Q96T25 663 aa12.3□□□□□ -0.44
CHD4-207ENST00000537634 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
CHD4-207ENST00000537634 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
CHD4-207ENST00000537634 CASP8AP2Q9UKL3 1982 aa12.29□□□□□ -0.44
CHD4-207ENST00000537634 SLC10A3P09131 477 aa12.29□□□□□ -0.44
CHD4-207ENST00000537634 KLRK1P26718 216 aa12.29□□□□□ -0.44
CHD4-207ENST00000537634 FKBP1BP68106 108 aa12.29□□□□□ -0.44
CHD4-207ENST00000537634 NBPF9Q3BBW0 867 aa12.29□□□□□ -0.44
CHD4-207ENST00000537634 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
CHD4-207ENST00000537634 GRM8O00222 908 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 MMP14P50281 582 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 GTF2IP78347 998 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 FOXO4P98177 505 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 KIF23Q02241 960 aaPredicted RBP12.28□□□□□ -0.44
CHD4-207ENST00000537634 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 KIAA0825Q8IV33 1275 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 SAGE1Q9NXZ1 904 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
CHD4-207ENST00000537634 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
CHD4-207ENST00000537634 SCAF8Q9UPN6 1271 aaKnown RBP12.28□□□□□ -0.44
CHD4-207ENST00000537634 WNT10BO00744 389 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 TAF5LO75529 589 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 SASH1O94885 1247 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 NF2P35240 595 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 RASAL3Q86YV0 1011 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.45
CHD4-207ENST00000537634 CD209Q9NNX6 404 aa12.27□□□□□ -0.45
CHD4-207ENST00000537634 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
CHD4-207ENST00000537634 TTLL12Q14166 644 aaPredicted RBP12.26□□□□□ -0.45
CHD4-207ENST00000537634 C15orf52Q6ZUT6 534 aaKnown RBP12.26□□□□□ -0.45
CHD4-207ENST00000537634 ZNF804AQ7Z570 1209 aa12.26□□□□□ -0.45
CHD4-207ENST00000537634 APOBEC3FQ8IUX4 373 aaKnown RBP12.26□□□□□ -0.45
CHD4-207ENST00000537634 SRCIN1Q9C0H9 1055 aa12.26□□□□□ -0.45
CHD4-207ENST00000537634 CNNM1Q9NRU3 951 aa12.26□□□□□ -0.45
CHD4-207ENST00000537634 CCDC85CA6NKD9 419 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 SNAP23O00161 211 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 PLIN1O60240 522 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 DGKZQ13574 1117 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 EPHA10Q5JZY3 1008 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 PRAMEF18Q5VWM3 479 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
CHD4-207ENST00000537634 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
CHD4-207ENST00000537634 MCOLN1Q9GZU1 580 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 IRS2Q9Y4H2 1338 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 ECM29Q5VYK3 1845 aa12.25□□□□□ -0.45
CHD4-207ENST00000537634 UBE2Q2LH0YL09 131 aa12.24□□□□□ -0.45
CHD4-207ENST00000537634 TRPA1O75762 1119 aa12.24□□□□□ -0.45
CHD4-207ENST00000537634 COL1A1P02452 1464 aaPredicted RBP12.24□□□□□ -0.45
CHD4-207ENST00000537634 DLGAP5Q15398 846 aa12.24□□□□□ -0.45
CHD4-207ENST00000537634 MOB2Q70IA6 237 aa12.24□□□□□ -0.45
CHD4-207ENST00000537634 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms