RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 PDE8AO60658 829 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 SCRN1Q12765 414 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 DDB1Q16531 1140 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 TPRNQ4KMQ1 711 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 SUSD4Q5VX71 490 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 LDHAL6AQ6ZMR3 332 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 FERMT3Q86UX7 667 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 BRF1Q92994 677 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 AGXT2Q9BYV1 514 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 COL4A1P02462 1669 aa11.07□□□□□ -0.64
PTPRR-205ENST00000537619 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
PTPRR-205ENST00000537619 MYH14Q7Z406 1995 aaKnown RBP11.06□□□□□ -0.64
PTPRR-205ENST00000537619 ABCC12Q96J65 1359 aa11.06□□□□□ -0.64
PTPRR-205ENST00000537619 CAMTA2O94983 1202 aa11.06□□□□□ -0.64
PTPRR-205ENST00000537619 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
PTPRR-205ENST00000537619 UBE2HP62256 183 aa11.06□□□□□ -0.64
PTPRR-205ENST00000537619 CCDC173Q0VFZ6 552 aa11.06□□□□□ -0.64
PTPRR-205ENST00000537619 GORABQ5T7V8 394 aa11.06□□□□□ -0.64
PTPRR-205ENST00000537619 PUS7LQ9H0K6 701 aaKnown RBP11.06□□□□□ -0.64
PTPRR-205ENST00000537619 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
PTPRR-205ENST00000537619 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 A0A0G2JS52 829 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 NUTM2BA6NNL0 878 aaPredicted RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 NUTM2EB1AL46 878 aaPredicted RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 CTDNEP1O95476 244 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 PHKA1P46020 1223 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 SIK1P57059 783 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 APOBRQ0VD83 1088 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 TTC6Q86TZ1 520 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 NUTM2AQ8IVF1 878 aaPredicted RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 CDCA7Q9BWT1 371 aaPredicted RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 PIH1D3Q9NQM4 214 aaKnown RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 CNNM1Q9NRU3 951 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 DDX60Q8IY21 1712 aaKnown RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 SNAP23O00161 211 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 PFKFB2O60825 505 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 FGFR2P21802 821 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 HELBQ8NG08 1087 aaPredicted RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 SMARCC2Q8TAQ2 1214 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 APPBP2Q92624 585 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 PDLIM2Q96JY6 352 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
PTPRR-205ENST00000537619 ATP6V1DQ9Y5K8 247 aa11.05□□□□□ -0.64
PTPRR-205ENST00000537619 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 MYH7P12883 1935 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 FAM177BA6PVY3 158 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 KCNQ2O43526 872 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 PDE8BO95263 885 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
PTPRR-205ENST00000537619 HAND2P61296 217 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 RESTQ13127 1097 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 WASHC4Q2M389 1173 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 CCDC183Q5T5S1 534 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 CHST3Q7LGC8 479 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 RNF214Q8ND24 703 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 NSUN7Q8NE18 718 aaKnown RBP11.04□□□□□ -0.64
PTPRR-205ENST00000537619 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 SEC31BQ9NQW1 1179 aa11.04□□□□□ -0.64
PTPRR-205ENST00000537619 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
PTPRR-205ENST00000537619 ATRNO75882 1429 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
PTPRR-205ENST00000537619 SYAP1Q96A49 352 aaPredicted RBP11.03□□□□□ -0.64
PTPRR-205ENST00000537619 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 ZNF512BQ96KM6 892 aaPredicted RBP11.03□□□□□ -0.64
PTPRR-205ENST00000537619 NCOA5Q9HCD5 579 aaKnown RBP11.03□□□□□ -0.64
PTPRR-205ENST00000537619 ESPNB1AK53 854 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 GPAA1O43292 621 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 NTSR2O95665 410 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 FGAP02671 866 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
PTPRR-205ENST00000537619 PDCP20941 246 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 ARID4AP29374 1257 aaPredicted RBP11.03□□□□□ -0.64
PTPRR-205ENST00000537619 ADD2P35612 726 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 SALL1Q9NSC2 1324 aa11.03□□□□□ -0.64
PTPRR-205ENST00000537619 ANTXR2P58335 489 aa11.02□□□□□ -0.65
PTPRR-205ENST00000537619 MB21D2Q8IYB1 491 aaPredicted RBP11.02□□□□□ -0.65
PTPRR-205ENST00000537619 FUCA2Q9BTY2 467 aa11.02□□□□□ -0.65
PTPRR-205ENST00000537619 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.65
PTPRR-205ENST00000537619 DENND2AQ9ULE3 1009 aa11.02□□□□□ -0.65
PTPRR-205ENST00000537619 COL5A3P25940 1745 aaPredicted RBP11.02□□□□□ -0.65
PTPRR-205ENST00000537619 TCRBV5S4A2TA0A5A2 114 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 PPFIA3O75145 1194 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 PDIA3P30101 505 aaKnown RBP11.01□□□□□ -0.65
PTPRR-205ENST00000537619 CLCN1P35523 988 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 FOSBP53539 338 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 CCT2P78371 535 aaKnown RBP11.01□□□□□ -0.65
PTPRR-205ENST00000537619 KRT85P78386 507 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 UTP14AQ9BVJ6 771 aaKnown RBP11.01□□□□□ -0.65
PTPRR-205ENST00000537619 TFIP11Q9UBB9 837 aaKnown RBP11.01□□□□□ -0.65
PTPRR-205ENST00000537619 LAMB2P55268 1798 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 BCORQ6W2J9 1755 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 LIG1P18858 919 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms