RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RSBN1LQ6PCB5 846 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF1A-209ENST00000536717 LDHAL6AQ6ZMR3 332 aa22.5■■□□□ 1.19
TNFRSF1A-209ENST00000536717 ANKRD44Q8N8A2 993 aa22.5■■□□□ 1.19
TNFRSF1A-209ENST00000536717 ZC3H15Q8WU90 426 aaKnown RBP22.5■■□□□ 1.19
TNFRSF1A-209ENST00000536717 IRS2Q9Y4H2 1338 aa22.49■■□□□ 1.19
TNFRSF1A-209ENST00000536717 TAF7LQ5H9L4 462 aa22.49■■□□□ 1.19
TNFRSF1A-209ENST00000536717 COA1Q9GZY4 146 aa22.49■■□□□ 1.19
TNFRSF1A-209ENST00000536717 USP17L3A6NCW0 530 aa22.48■■□□□ 1.19
TNFRSF1A-209ENST00000536717 USP17L4A6NCW7 530 aa22.48■■□□□ 1.19
TNFRSF1A-209ENST00000536717 TRAF5O00463 557 aa22.48■■□□□ 1.19
TNFRSF1A-209ENST00000536717 TBC1D10BQ4KMP7 808 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF1A-209ENST00000536717 USP17L1Q7RTZ2 530 aa22.48■■□□□ 1.19
TNFRSF1A-209ENST00000536717 AGBL3Q8NEM8 1001 aa22.48■■□□□ 1.19
TNFRSF1A-209ENST00000536717 GMLQ99445 158 aa22.48■■□□□ 1.19
TNFRSF1A-209ENST00000536717 KCNJ4P48050 445 aa22.47■■□□□ 1.19
TNFRSF1A-209ENST00000536717 CNNM1Q9NRU3 951 aa22.47■■□□□ 1.19
TNFRSF1A-209ENST00000536717 MKRN1Q9UHC7 482 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-209ENST00000536717 CNTNAP1P78357 1384 aa22.47■■□□□ 1.19
TNFRSF1A-209ENST00000536717 GLIS2Q9BZE0 524 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-209ENST00000536717 PUS3Q9BZE2 481 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-209ENST00000536717 API5Q9BZZ5 524 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-209ENST00000536717 DACT2Q5SW24 774 aa22.46■■□□□ 1.19
TNFRSF1A-209ENST00000536717 RBM26Q5T8P6 1007 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1A-209ENST00000536717 C15orf52Q6ZUT6 534 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1A-209ENST00000536717 ZNF280AP59817 542 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF1A-209ENST00000536717 KIF16BQ96L93 1317 aa22.45■■□□□ 1.18
TNFRSF1A-209ENST00000536717 KIF4BQ2VIQ3 1234 aa22.44■■□□□ 1.18
TNFRSF1A-209ENST00000536717 STRIP1Q5VSL9 837 aa22.44■■□□□ 1.18
TNFRSF1A-209ENST00000536717 CST9Q5W186 159 aa22.44■■□□□ 1.18
TNFRSF1A-209ENST00000536717 MXD3Q9BW11 206 aa22.44■■□□□ 1.18
TNFRSF1A-209ENST00000536717 CD209Q9NNX6 404 aa22.44■■□□□ 1.18
TNFRSF1A-209ENST00000536717 PLIN1O60240 522 aa22.43■■□□□ 1.18
TNFRSF1A-209ENST00000536717 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
TNFRSF1A-209ENST00000536717 ARHGAP45Q92619 1136 aa22.43■■□□□ 1.18
TNFRSF1A-209ENST00000536717 RIPOR2Q9Y4F9 1068 aa22.43■■□□□ 1.18
TNFRSF1A-209ENST00000536717 USP17L8P0C7I0 530 aa22.42■■□□□ 1.18
TNFRSF1A-209ENST00000536717 RASSF10A6NK89 507 aa22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 BCAR3O75815 825 aa22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 TTLL5Q6EMB2 1281 aa22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 FBXW7Q969H0 707 aa22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 LRRC24Q50LG9 513 aa22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 KLHDC4Q8TBB5 520 aa22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 ASTN2O75129 1339 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 MYO3BQ8WXR4 1341 aa22.41■■□□□ 1.18
TNFRSF1A-209ENST00000536717 GTF2IP78347 998 aa22.4■■□□□ 1.18
TNFRSF1A-209ENST00000536717 UBE4AQ14139 1066 aa22.4■■□□□ 1.18
TNFRSF1A-209ENST00000536717 DLK2Q6UY11 383 aa22.4■■□□□ 1.18
TNFRSF1A-209ENST00000536717 USP48Q86UV5 1035 aa22.4■■□□□ 1.18
TNFRSF1A-209ENST00000536717 MYOZ2Q9NPC6 264 aa22.4■■□□□ 1.18
TNFRSF1A-209ENST00000536717 ABT1Q9ULW3 272 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1A-209ENST00000536717 CELF2O95319 508 aaKnown RBP22.39■■□□□ 1.17
TNFRSF1A-209ENST00000536717 UBTFL1P0CB47 393 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF1A-209ENST00000536717 IL1R1P14778 569 aa22.39■■□□□ 1.17
TNFRSF1A-209ENST00000536717 RFX5P48382 616 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF1A-209ENST00000536717 VEGFBP49765 207 aa22.39■■□□□ 1.17
TNFRSF1A-209ENST00000536717 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.17
TNFRSF1A-209ENST00000536717 MROH5Q6ZUA9 1318 aa22.39■■□□□ 1.17
TNFRSF1A-209ENST00000536717 INTS3Q68E01 1043 aaKnown RBP22.38■■□□□ 1.17
TNFRSF1A-209ENST00000536717 KRT26Q7Z3Y9 468 aa22.38■■□□□ 1.17
TNFRSF1A-209ENST00000536717 ZNF804AQ7Z570 1209 aa22.38■■□□□ 1.17
TNFRSF1A-209ENST00000536717 GGA3Q9NZ52 723 aa22.38■■□□□ 1.17
TNFRSF1A-209ENST00000536717 TNNQ9UQP3 1299 aa22.38■■□□□ 1.17
TNFRSF1A-209ENST00000536717 TRIM27P14373 513 aa22.37■■□□□ 1.17
TNFRSF1A-209ENST00000536717 SCARF1Q14162 830 aa22.37■■□□□ 1.17
TNFRSF1A-209ENST00000536717 DCPSQ96C86 337 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1A-209ENST00000536717 MEIS3Q99687 375 aa22.37■■□□□ 1.17
TNFRSF1A-209ENST00000536717 TLL2Q9Y6L7 1015 aa22.37■■□□□ 1.17
TNFRSF1A-209ENST00000536717 ECM29Q5VYK3 1845 aa22.37■■□□□ 1.17
TNFRSF1A-209ENST00000536717 VGLL2Q8N8G2 317 aa22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 ARAP2Q8WZ64 1704 aa22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 ADM5C9JUS6 153 aa22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 ATF7IPQ6VMQ6 1270 aa22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 CERS5Q8N5B7 392 aa22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 ZNF408Q9H9D4 720 aa22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 LRRFIP2Q9Y608 721 aaKnown RBP22.36■■□□□ 1.17
TNFRSF1A-209ENST00000536717 MYH13Q9UKX3 1938 aa22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 IPO8O15397 1037 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 METTL24Q5JXM2 366 aa22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 ANGEL2Q5VTE6 544 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 KIAA0825Q8IV33 1275 aa22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 OGFOD1Q8N543 542 aa22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 FAM84BQ96KN1 310 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1A-209ENST00000536717 THSD7BQ9C0I4 1608 aa22.34■■□□□ 1.17
TNFRSF1A-209ENST00000536717 PDE8BO95263 885 aa22.34■■□□□ 1.17
TNFRSF1A-209ENST00000536717 HSPA1AP0DMV8 641 aaKnown RBP22.34■■□□□ 1.17
TNFRSF1A-209ENST00000536717 HSPA1BP0DMV9 641 aaKnown RBP22.34■■□□□ 1.17
TNFRSF1A-209ENST00000536717 GYG1P46976 350 aa22.34■■□□□ 1.17
TNFRSF1A-209ENST00000536717 NBPF9Q3BBW0 867 aa22.34■■□□□ 1.17
TNFRSF1A-209ENST00000536717 SAPCD2Q86UD0 394 aa22.34■■□□□ 1.17
TNFRSF1A-209ENST00000536717 SULF1Q8IWU6 871 aa22.33■■□□□ 1.17
TNFRSF1A-209ENST00000536717 TDRD7Q8NHU6 1098 aaKnown RBP22.33■■□□□ 1.17
TNFRSF1A-209ENST00000536717 PITPNM2Q9BZ72 1349 aa22.33■■□□□ 1.16
TNFRSF1A-209ENST00000536717 WDR33Q9C0J8 1336 aaKnown RBP22.33■■□□□ 1.16
TNFRSF1A-209ENST00000536717 EYA2O00167 538 aa22.32■■□□□ 1.16
TNFRSF1A-209ENST00000536717 WNT10BO00744 389 aa22.32■■□□□ 1.16
TNFRSF1A-209ENST00000536717 HIBADHP31937 336 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1A-209ENST00000536717 MMP14P50281 582 aa22.32■■□□□ 1.16
TNFRSF1A-209ENST00000536717 JAG2Q9Y219 1238 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms