RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 A0A1B0GUL6 1792 aa27.15■■□□□ 1.94
HMGA2-206ENST00000536545 M0R2C6 588 aa27.14■■□□□ 1.94
HMGA2-206ENST00000536545 COL9A3Q14050 684 aaPredicted RBP27.14■■□□□ 1.94
HMGA2-206ENST00000536545 KRT32Q14532 448 aa27.14■■□□□ 1.94
HMGA2-206ENST00000536545 IGHMBP2P38935 993 aaKnown RBP27.14■■□□□ 1.93
HMGA2-206ENST00000536545 BLOC1S2Q6QNY1 142 aa27.14■■□□□ 1.93
HMGA2-206ENST00000536545 HELBQ8NG08 1087 aaPredicted RBP27.14■■□□□ 1.93
HMGA2-206ENST00000536545 ALDH8A1Q9H2A2 487 aaPredicted RBP27.14■■□□□ 1.93
HMGA2-206ENST00000536545 SRP68Q9UHB9 627 aaKnown RBP27.14■■□□□ 1.93
HMGA2-206ENST00000536545 LARGE1O95461 756 aa27.13■■□□□ 1.93
HMGA2-206ENST00000536545 RPS6KB1P23443 525 aa27.13■■□□□ 1.93
HMGA2-206ENST00000536545 PHKA1P46020 1223 aa27.13■■□□□ 1.93
HMGA2-206ENST00000536545 SF3B3Q15393 1217 aaKnown RBP27.13■■□□□ 1.93
HMGA2-206ENST00000536545 CCDC102BQ68D86 513 aa27.13■■□□□ 1.93
HMGA2-206ENST00000536545 C3orf67Q6ZVT6 689 aa27.13■■□□□ 1.93
HMGA2-206ENST00000536545 AMIGO3Q86WK7 504 aa27.13■■□□□ 1.93
HMGA2-206ENST00000536545 RTCBQ9Y3I0 505 aaKnown RBP27.13■■□□□ 1.93
HMGA2-206ENST00000536545 TRAK2O60296 914 aa27.12■■□□□ 1.93
HMGA2-206ENST00000536545 SLC5A1P13866 664 aa27.12■■□□□ 1.93
HMGA2-206ENST00000536545 PTMSP20962 102 aa27.12■■□□□ 1.93
HMGA2-206ENST00000536545 OSBP2Q969R2 916 aa27.12■■□□□ 1.93
HMGA2-206ENST00000536545 SH2B1Q9NRF2 756 aaPredicted RBP27.12■■□□□ 1.93
HMGA2-206ENST00000536545 CYP21A2P08686 494 aa27.12■■□□□ 1.93
HMGA2-206ENST00000536545 UQCRFS1P1P0C7P4 283 aa27.12■■□□□ 1.93
HMGA2-206ENST00000536545 ZSCAN31Q96LW9 406 aaPredicted RBP27.12■■□□□ 1.93
HMGA2-206ENST00000536545 LARP6Q9BRS8 491 aaKnown RBP27.12■■□□□ 1.93
HMGA2-206ENST00000536545 BCL11BQ9C0K0 894 aaPredicted RBP27.12■■□□□ 1.93
HMGA2-206ENST00000536545 BRD1O95696 1058 aa27.11■■□□□ 1.93
HMGA2-206ENST00000536545 SLC10A5Q5PT55 438 aa27.11■■□□□ 1.93
HMGA2-206ENST00000536545 CDC5LQ99459 802 aaKnown RBP27.11■■□□□ 1.93
HMGA2-206ENST00000536545 HSPD1P10809 573 aaKnown RBP27.1■■□□□ 1.93
HMGA2-206ENST00000536545 BICDL1Q6ZP65 573 aa27.1■■□□□ 1.93
HMGA2-206ENST00000536545 APPBP2Q92624 585 aa27.1■■□□□ 1.93
HMGA2-206ENST00000536545 QTRT2Q9H974 415 aaKnown RBP27.09■■□□□ 1.93
HMGA2-206ENST00000536545 ZPR1O75312 459 aa27.09■■□□□ 1.93
HMGA2-206ENST00000536545 TTF1Q15361 905 aaPredicted RBP27.09■■□□□ 1.93
HMGA2-206ENST00000536545 NYXQ9GZU5 481 aa27.09■■□□□ 1.93
HMGA2-206ENST00000536545 DOCK2Q92608 1830 aa27.08■■□□□ 1.93
HMGA2-206ENST00000536545 ST3GAL1Q11201 340 aa27.08■■□□□ 1.93
HMGA2-206ENST00000536545 ARHGEF1Q92888 912 aaKnown RBP27.08■■□□□ 1.93
HMGA2-206ENST00000536545 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.08■■□□□ 1.93
HMGA2-206ENST00000536545 PIH1D3Q9NQM4 214 aaKnown RBP27.08■■□□□ 1.93
HMGA2-206ENST00000536545 FOXP2O15409 715 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 CHRNDQ07001 517 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 ANKRD1Q15327 319 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 TPCN1Q9ULQ1 816 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.07■■□□□ 1.92
HMGA2-206ENST00000536545 BRWD3Q6RI45 1802 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 GOLGA6L22H0YM25 854 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 TOB2Q14106 344 aaPredicted RBP27.07■■□□□ 1.92
HMGA2-206ENST00000536545 ME3Q16798 604 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 STOX1Q6ZVD7 989 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 NEK1Q96PY6 1258 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 SETDB2Q96T68 719 aa27.07■■□□□ 1.92
HMGA2-206ENST00000536545 LAMA4Q16363 1823 aa27.06■■□□□ 1.92
HMGA2-206ENST00000536545 SNAP23O00161 211 aa27.06■■□□□ 1.92
HMGA2-206ENST00000536545 ADD2P35612 726 aa27.06■■□□□ 1.92
HMGA2-206ENST00000536545 WASHC4Q2M389 1173 aa27.06■■□□□ 1.92
HMGA2-206ENST00000536545 MYO5AQ9Y4I1 1855 aaKnown RBP27.06■■□□□ 1.92
HMGA2-206ENST00000536545 ZSCAN25Q6NSZ9 544 aa27.05■■□□□ 1.92
HMGA2-206ENST00000536545 TCEANC2Q96MN5 208 aa27.05■■□□□ 1.92
HMGA2-206ENST00000536545 ANKRD18AQ8IVF6 992 aa27.04■■□□□ 1.92
HMGA2-206ENST00000536545 CCDC83Q8IWF9 413 aa27.04■■□□□ 1.92
HMGA2-206ENST00000536545 LRRC4BQ9NT99 713 aa27.04■■□□□ 1.92
HMGA2-206ENST00000536545 RASGRF1Q13972 1273 aa27.04■■□□□ 1.92
HMGA2-206ENST00000536545 NBPF5PQ86XG9 351 aaPredicted RBP27.04■■□□□ 1.92
HMGA2-206ENST00000536545 PUS7LQ9H0K6 701 aaKnown RBP27.04■■□□□ 1.92
HMGA2-206ENST00000536545 TAF1P21675 1872 aa27.04■■□□□ 1.92
HMGA2-206ENST00000536545 UBR3Q6ZT12 1888 aa27.03■■□□□ 1.92
HMGA2-206ENST00000536545 SPATA5Q8NB90 893 aa27.03■■□□□ 1.92
HMGA2-206ENST00000536545 BSDC1Q9NW68 430 aaPredicted RBP27.03■■□□□ 1.92
HMGA2-206ENST00000536545 GTF2E1P29083 439 aaPredicted RBP27.02■■□□□ 1.92
HMGA2-206ENST00000536545 UBE3CQ15386 1083 aa27.02■■□□□ 1.92
HMGA2-206ENST00000536545 SKOR2Q2VWA4 1001 aaPredicted RBP27.02■■□□□ 1.92
HMGA2-206ENST00000536545 FAM196AQ6ZSG2 479 aa27.02■■□□□ 1.92
HMGA2-206ENST00000536545 SMC3Q9UQE7 1217 aa27.02■■□□□ 1.92
HMGA2-206ENST00000536545 TNRC6CQ9HCJ0 1690 aaKnown RBP27.02■■□□□ 1.92
HMGA2-206ENST00000536545 MCTP1Q6DN14 999 aa27.02■■□□□ 1.92
HMGA2-206ENST00000536545 WDR33Q9C0J8 1336 aaKnown RBP27.01■■□□□ 1.91
HMGA2-206ENST00000536545 A0A0G2JLW4 131 aa27.01■■□□□ 1.91
HMGA2-206ENST00000536545 GPAA1O43292 621 aa27.01■■□□□ 1.91
HMGA2-206ENST00000536545 HMGB1P09429 215 aaKnown RBP27.01■■□□□ 1.91
HMGA2-206ENST00000536545 TCRBV5S4A2TA0A5A2 114 aa27■■□□□ 1.91
HMGA2-206ENST00000536545 PDE6AP16499 860 aa27■■□□□ 1.91
HMGA2-206ENST00000536545 ADRA2BP18089 450 aa27■■□□□ 1.91
HMGA2-206ENST00000536545 TRAPPC3LQ5T215 181 aa27■■□□□ 1.91
HMGA2-206ENST00000536545 SLC9C2Q5TAH2 1124 aa27■■□□□ 1.91
HMGA2-206ENST00000536545 IDH1O75874 414 aaKnown RBP26.99■■□□□ 1.91
HMGA2-206ENST00000536545 RFC4P35249 363 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 WWC3Q9ULE0 1092 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 PHF14O94880 888 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 BCAMP50895 628 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 FOXD4L5Q5VV16 416 aaPredicted RBP26.99■■□□□ 1.91
HMGA2-206ENST00000536545 TPTE2Q6XPS3 522 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 KRT27Q7Z3Y8 459 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 NECAB1Q8N987 351 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 FOXD4L4Q8WXT5 416 aaPredicted RBP26.99■■□□□ 1.91
HMGA2-206ENST00000536545 CELF1Q92879 486 aaKnown RBP26.99■■□□□ 1.91
HMGA2-206ENST00000536545 CTNNA3Q9UI47 895 aa26.99■■□□□ 1.91
HMGA2-206ENST00000536545 ZNF804BA4D1E1 1349 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms