RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GPLD1P80108 840 aa6.81□□□□□ -1.32
YBX3-205ENST00000536107 NFIAQ12857 509 aa6.81□□□□□ -1.32
YBX3-205ENST00000536107 DHX32Q7L7V1 743 aaKnown RBP6.81□□□□□ -1.32
YBX3-205ENST00000536107 M0R2N6 131 aa6.8□□□□□ -1.32
YBX3-205ENST00000536107 DHX15O43143 795 aaKnown RBP6.8□□□□□ -1.32
YBX3-205ENST00000536107 GLB1P16278 677 aa6.8□□□□□ -1.32
YBX3-205ENST00000536107 OGFOD2Q6N063 350 aa6.8□□□□□ -1.32
YBX3-205ENST00000536107 MAP4K3Q8IVH8 894 aa6.8□□□□□ -1.32
YBX3-205ENST00000536107 STAG2Q8N3U4 1231 aa6.8□□□□□ -1.32
YBX3-205ENST00000536107 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
YBX3-205ENST00000536107 ALKQ9UM73 1620 aa6.79□□□□□ -1.32
YBX3-205ENST00000536107 TGFBR3LH3BV60 316 aa6.79□□□□□ -1.32
YBX3-205ENST00000536107 EPB42P16452 691 aa6.79□□□□□ -1.32
YBX3-205ENST00000536107 TRIM50Q86XT4 487 aa6.79□□□□□ -1.32
YBX3-205ENST00000536107 TPCN2Q8NHX9 752 aa6.79□□□□□ -1.32
YBX3-205ENST00000536107 UBL7Q96S82 380 aaPredicted RBP6.79□□□□□ -1.32
YBX3-205ENST00000536107 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
YBX3-205ENST00000536107 ZFATQ9P243 1243 aa6.79□□□□□ -1.32
YBX3-205ENST00000536107 DMGDHQ9UI17 866 aaKnown RBP6.79□□□□□ -1.32
YBX3-205ENST00000536107 LRRC7Q96NW7 1537 aa6.78□□□□□ -1.32
YBX3-205ENST00000536107 PRR19A6NJB7 356 aa6.78□□□□□ -1.32
YBX3-205ENST00000536107 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
YBX3-205ENST00000536107 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
YBX3-205ENST00000536107 PPP1R12BO60237 982 aaPredicted RBP6.78□□□□□ -1.32
YBX3-205ENST00000536107 YY1P25490 414 aa6.78□□□□□ -1.32
YBX3-205ENST00000536107 GRNP28799 593 aaKnown RBP6.78□□□□□ -1.32
YBX3-205ENST00000536107 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.78□□□□□ -1.32
YBX3-205ENST00000536107 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
YBX3-205ENST00000536107 POU5F2Q8N7G0 328 aa6.78□□□□□ -1.32
YBX3-205ENST00000536107 KRTAP4-11Q9BYQ6 195 aa6.78□□□□□ -1.32
YBX3-205ENST00000536107 GDPD2Q9HCC8 539 aa6.78□□□□□ -1.32
YBX3-205ENST00000536107 C8AP07357 584 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 ABL2P42684 1182 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 MLLT1Q03111 559 aaPredicted RBP6.77□□□□□ -1.33
YBX3-205ENST00000536107 SETDB1Q15047 1291 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 CCDC102BQ68D86 513 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 RNF43Q68DV7 783 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 ARMC10Q8N2F6 343 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 DBNDD2Q9BQY9 259 aa6.77□□□□□ -1.33
YBX3-205ENST00000536107 C2orf49Q9BVC5 232 aaPredicted RBP6.77□□□□□ -1.33
YBX3-205ENST00000536107 CEP170BQ9Y4F5 1589 aaPredicted RBP6.77□□□□□ -1.33
YBX3-205ENST00000536107 FAM135BQ49AJ0 1406 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 C21orf2O43822 256 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
YBX3-205ENST00000536107 NRLP54845 237 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 UVSSAQ2YD98 709 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 THEMISQ8N1K5 641 aaPredicted RBP6.76□□□□□ -1.33
YBX3-205ENST00000536107 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 CEP41Q9BYV8 373 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 C7orf69Q9H7B7 122 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 KIAA1024Q9UPX6 916 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 SETBP1Q9Y6X0 1596 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 AGLP35573 1532 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 PLCH2O75038 1416 aa6.76□□□□□ -1.33
YBX3-205ENST00000536107 ZNF518AQ6AHZ1 1483 aa6.75□□□□□ -1.33
YBX3-205ENST00000536107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.75□□□□□ -1.33
YBX3-205ENST00000536107 JCADQ9P266 1359 aa6.75□□□□□ -1.33
YBX3-205ENST00000536107 USP17L5A8MUK1 530 aa6.75□□□□□ -1.33
YBX3-205ENST00000536107 EIF2AK2P19525 551 aaKnown RBP6.75□□□□□ -1.33
YBX3-205ENST00000536107 TARSP26639 723 aaKnown RBP6.75□□□□□ -1.33
YBX3-205ENST00000536107 RANGAP1P46060 587 aaPredicted RBP6.75□□□□□ -1.33
YBX3-205ENST00000536107 ATP1A2P50993 1020 aa6.75□□□□□ -1.33
YBX3-205ENST00000536107 NEUROD2Q15784 382 aa6.75□□□□□ -1.33
YBX3-205ENST00000536107 GGT6Q6P531 493 aa6.75□□□□□ -1.33
YBX3-205ENST00000536107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.75□□□□□ -1.33
YBX3-205ENST00000536107 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
YBX3-205ENST00000536107 RARAP10276 462 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 INPP5BP32019 993 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 RTN1Q16799 776 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 KRT25Q7Z3Z0 450 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 TRIM42Q8IWZ5 723 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 DEPDC4Q8N2C3 294 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 IL22RA1Q8N6P7 574 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 GAS2L2Q8NHY3 880 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 PLD4Q96BZ4 506 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 BCS1LQ9Y276 419 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 VWDEQ8N2E2 1590 aa6.74□□□□□ -1.33
YBX3-205ENST00000536107 A2ML1A8K2U0 1454 aa6.73□□□□□ -1.33
YBX3-205ENST00000536107 ATAD2Q6PL18 1390 aa6.73□□□□□ -1.33
YBX3-205ENST00000536107 RNF17Q9BXT8 1623 aaKnown RBP6.73□□□□□ -1.33
YBX3-205ENST00000536107 HFE2Q6ZVN8 426 aa6.73□□□□□ -1.33
YBX3-205ENST00000536107 ABI1Q8IZP0 508 aa6.73□□□□□ -1.33
YBX3-205ENST00000536107 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
YBX3-205ENST00000536107 ALG2Q9H553 416 aa6.73□□□□□ -1.33
YBX3-205ENST00000536107 MYO3AQ8NEV4 1616 aa6.72□□□□□ -1.33
YBX3-205ENST00000536107 CLDN10P78369 228 aa6.72□□□□□ -1.33
YBX3-205ENST00000536107 GDF6Q6KF10 455 aaPredicted RBP6.72□□□□□ -1.33
YBX3-205ENST00000536107 TSEN2Q8NCE0 465 aaKnown RBP6.72□□□□□ -1.33
YBX3-205ENST00000536107 UTP4Q969X6 686 aaKnown RBP6.72□□□□□ -1.33
YBX3-205ENST00000536107 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
YBX3-205ENST00000536107 MUC3BQ9H195 1237 aa6.72□□□□□ -1.33
YBX3-205ENST00000536107 DIP2CQ9Y2E4 1556 aa6.72□□□□□ -1.33
YBX3-205ENST00000536107 SPATA31A6Q5VVP1 1343 aa6.72□□□□□ -1.33
YBX3-205ENST00000536107 SUPT6HQ7KZ85 1726 aaKnown RBP6.71□□□□□ -1.34
YBX3-205ENST00000536107 HMX2A2RU54 273 aa6.71□□□□□ -1.34
YBX3-205ENST00000536107 SASH3O75995 380 aa6.71□□□□□ -1.34
YBX3-205ENST00000536107 IDH3AP50213 366 aa6.71□□□□□ -1.34
YBX3-205ENST00000536107 RBM6P78332 1123 aaKnown RBP6.71□□□□□ -1.34
YBX3-205ENST00000536107 CACTIN-AS1Q8N1I8 211 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms