RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SPATA31A7Q8IWB4 1347 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 LAMA4Q16363 1823 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
VPS33B-202ENST00000535906 VGLL2Q8N8G2 317 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 LOC102724428A0A0B4J2F2 783 aa15.87■□□□□ 0.13
VPS33B-202ENST00000535906 SIK1P57059 783 aa15.87■□□□□ 0.13
VPS33B-202ENST00000535906 DNM1Q05193 864 aaKnown RBP15.87■□□□□ 0.13
VPS33B-202ENST00000535906 ITPK1Q13572 414 aa15.87■□□□□ 0.13
VPS33B-202ENST00000535906 HS1BP3Q53T59 392 aa15.87■□□□□ 0.13
VPS33B-202ENST00000535906 FIBPO43427 364 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 MCAMP43121 646 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 SUSD4Q5VX71 490 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 CDC37L1Q7L3B6 337 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 ZSCAN30Q86W11 494 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 BRF1Q92994 677 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 GTF3C6Q969F1 213 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 WASHC4Q2M389 1173 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 TTLL5Q6EMB2 1281 aa15.86■□□□□ 0.13
VPS33B-202ENST00000535906 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
VPS33B-202ENST00000535906 FAM177BA6PVY3 158 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 E7EWF7 191 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 FOXP2O15409 715 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 PDE8BO95263 885 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 HMGB1P09429 215 aaKnown RBP15.85■□□□□ 0.13
VPS33B-202ENST00000535906 HCLS1P14317 486 aaPredicted RBP15.85■□□□□ 0.13
VPS33B-202ENST00000535906 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 AKAP11Q9UKA4 1901 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 MYH14Q7Z406 1995 aaKnown RBP15.85■□□□□ 0.13
VPS33B-202ENST00000535906 ZFYP08048 801 aaPredicted RBP15.85■□□□□ 0.13
VPS33B-202ENST00000535906 PDCP20941 246 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 LRRFIP1Q32MZ4 808 aaKnown RBP15.85■□□□□ 0.13
VPS33B-202ENST00000535906 TPRNQ4KMQ1 711 aa15.85■□□□□ 0.13
VPS33B-202ENST00000535906 PUS7LQ9H0K6 701 aaKnown RBP15.85■□□□□ 0.13
VPS33B-202ENST00000535906 KCNQ2O43526 872 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 JAK2O60674 1132 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 PHF14O94880 888 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
VPS33B-202ENST00000535906 EXOSC10Q01780 885 aaKnown RBP15.84■□□□□ 0.13
VPS33B-202ENST00000535906 BARGINQ6ZT62 677 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 FERMT3Q86UX7 667 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 ABCC12Q96J65 1359 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 CAMTA2O94983 1202 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 UBE2HP62256 183 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 FGD1P98174 961 aa15.84■□□□□ 0.13
VPS33B-202ENST00000535906 PDIA4P13667 645 aaKnown RBP15.83■□□□□ 0.12
VPS33B-202ENST00000535906 SCRN1Q12765 414 aa15.83■□□□□ 0.12
VPS33B-202ENST00000535906 HELBQ8NG08 1087 aaPredicted RBP15.83■□□□□ 0.12
VPS33B-202ENST00000535906 APPBP2Q92624 585 aa15.83■□□□□ 0.12
VPS33B-202ENST00000535906 NAP1L5Q96NT1 182 aaPredicted RBP15.83■□□□□ 0.12
VPS33B-202ENST00000535906 TSPY26PQ9H489 355 aa15.83■□□□□ 0.12
VPS33B-202ENST00000535906 FAM173BQ6P4H8 233 aa15.83■□□□□ 0.12
VPS33B-202ENST00000535906 ZNF512BQ96KM6 892 aaPredicted RBP15.83■□□□□ 0.12
VPS33B-202ENST00000535906 AGXT2Q9BYV1 514 aa15.83■□□□□ 0.12
VPS33B-202ENST00000535906 MYH7P12883 1935 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 PHKA1P46020 1223 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 CHST3Q7LGC8 479 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 AK7Q96M32 723 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 UTP14AQ9BVJ6 771 aaKnown RBP15.82■□□□□ 0.12
VPS33B-202ENST00000535906 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 FGAP02671 866 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 APOBRQ0VD83 1088 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 CCDC102BQ68D86 513 aa15.82■□□□□ 0.12
VPS33B-202ENST00000535906 MSNP26038 577 aaKnown RBP15.81■□□□□ 0.12
VPS33B-202ENST00000535906 SEC31BQ9NQW1 1179 aa15.81■□□□□ 0.12
VPS33B-202ENST00000535906 RREB1Q92766 1687 aa15.81■□□□□ 0.12
VPS33B-202ENST00000535906 MYO5AQ9Y4I1 1855 aaKnown RBP15.81■□□□□ 0.12
VPS33B-202ENST00000535906 SNAP23O00161 211 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 PFKFB2O60825 505 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 FGFR2P21802 821 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 HAND2P61296 217 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 LRP5O75197 1615 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 MROH5Q6ZUA9 1318 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 GPAA1O43292 621 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 PUM3Q15397 648 aaKnown RBP15.8■□□□□ 0.12
VPS33B-202ENST00000535906 LPIN2Q92539 896 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 DDX11Q96FC9 970 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■■■■ 32.4
VPS33B-202ENST00000535906 PIH1D3Q9NQM4 214 aaKnown RBP15.8■□□□□ 0.12
VPS33B-202ENST00000535906 CTNNA3Q9UI47 895 aa15.8■□□□□ 0.12
VPS33B-202ENST00000535906 NOL7Q9UMY1 257 aaKnown RBP15.8■□□□□ 0.12
VPS33B-202ENST00000535906 NIP7Q9Y221 180 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS33B-202ENST00000535906 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-202ENST00000535906 ADD2P35612 726 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 FAM98CQ17RN3 349 aaKnown RBP15.79■□□□□ 0.12
VPS33B-202ENST00000535906 CSPP1Q1MSJ5 1256 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 CCDC183Q5T5S1 534 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 SLC9C2Q5TAH2 1124 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 TOM1O60784 492 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 NTSR2O95665 410 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 KRT85P78386 507 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 IMMTQ16891 758 aaKnown RBP15.79■□□□□ 0.12
VPS33B-202ENST00000535906 PARP10Q53GL7 1025 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 RNF214Q8ND24 703 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 SMARCC2Q8TAQ2 1214 aa15.79■□□□□ 0.12
VPS33B-202ENST00000535906 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
VPS33B-202ENST00000535906 IDH1O75874 414 aaKnown RBP15.78■□□□□ 0.12
VPS33B-202ENST00000535906 CTDNEP1O95476 244 aa15.78■□□□□ 0.12
VPS33B-202ENST00000535906 CCT2P78371 535 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms