RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 SASH1O94885 1247 aa10.36□□□□□ -0.75
CHFR-211ENST00000535897 CTSWP56202 376 aa10.36□□□□□ -0.75
CHFR-211ENST00000535897 CALD1Q05682 793 aaKnown RBP10.36□□□□□ -0.75
CHFR-211ENST00000535897 SREBF2Q12772 1141 aa10.36□□□□□ -0.75
CHFR-211ENST00000535897 PRKG1Q13976 671 aa10.36□□□□□ -0.75
CHFR-211ENST00000535897 METTL22Q9BUU2 404 aaPredicted RBP10.36□□□□□ -0.75
CHFR-211ENST00000535897 MAP3K2Q9Y2U5 619 aa10.36□□□□□ -0.75
CHFR-211ENST00000535897 MED23Q9ULK4 1368 aa10.36□□□□□ -0.75
CHFR-211ENST00000535897 MYO3BQ8WXR4 1341 aa10.35□□□□□ -0.75
CHFR-211ENST00000535897 MYH3P11055 1940 aa10.35□□□□□ -0.75
CHFR-211ENST00000535897 WTIPA6NIX2 430 aaPredicted RBP10.35□□□□□ -0.75
CHFR-211ENST00000535897 GNAI1P63096 354 aa10.35□□□□□ -0.75
CHFR-211ENST00000535897 NEXNQ0ZGT2 675 aa10.35□□□□□ -0.75
CHFR-211ENST00000535897 DDX10Q13206 875 aaKnown RBP10.35□□□□□ -0.75
CHFR-211ENST00000535897 DACT2Q5SW24 774 aa10.35□□□□□ -0.75
CHFR-211ENST00000535897 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
CHFR-211ENST00000535897 GPR25O00155 361 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 WNT10BO00744 389 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 FKTNO75072 461 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 KCNJ4P48050 445 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 CCT4P50991 539 aaKnown RBP10.34□□□□□ -0.75
CHFR-211ENST00000535897 STRIP1Q5VSL9 837 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 CCDC30Q5VVM6 783 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 FBXO46Q6PJ61 603 aaPredicted RBP10.34□□□□□ -0.75
CHFR-211ENST00000535897 ARMC9Q7Z3E5 817 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 APOBEC3FQ8IUX4 373 aaKnown RBP10.34□□□□□ -0.75
CHFR-211ENST00000535897 CHMP4AQ9BY43 222 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 GREM2Q9H772 168 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 BSDC1Q9NW68 430 aaPredicted RBP10.34□□□□□ -0.75
CHFR-211ENST00000535897 MINPP1Q9UNW1 487 aa10.34□□□□□ -0.75
CHFR-211ENST00000535897 APAF1O14727 1248 aa10.33□□□□□ -0.76
CHFR-211ENST00000535897 ZNF853P0CG23 659 aa10.33□□□□□ -0.76
CHFR-211ENST00000535897 IGHMBP2P38935 993 aaKnown RBP10.33□□□□□ -0.76
CHFR-211ENST00000535897 TM4SF4P48230 202 aa10.33□□□□□ -0.76
CHFR-211ENST00000535897 PTPN12Q05209 780 aaKnown RBP10.33□□□□□ -0.76
CHFR-211ENST00000535897 KIAA0825Q8IV33 1275 aa10.33□□□□□ -0.76
CHFR-211ENST00000535897 C8orf58Q8NAV2 365 aa10.33□□□□□ -0.76
CHFR-211ENST00000535897 TTLL11Q8NHH1 800 aa10.33□□□□□ -0.76
CHFR-211ENST00000535897 COA1Q9GZY4 146 aa10.33□□□□□ -0.76
CHFR-211ENST00000535897 ANGEL1Q9UNK9 670 aaKnown RBP10.33□□□□□ -0.76
CHFR-211ENST00000535897 PI4KAP2A4QPH2 592 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 GTF2IP78347 998 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 CWF19L2Q2TBE0 894 aaKnown RBP10.32□□□□□ -0.76
CHFR-211ENST00000535897 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 UBE3BQ7Z3V4 1068 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 PI4KAP1Q8N8J0 262 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 STK31Q9BXU1 1019 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 ZNF646O15015 1829 aaPredicted RBP10.32□□□□□ -0.76
CHFR-211ENST00000535897 ZNF804BA4D1E1 1349 aa10.32□□□□□ -0.76
CHFR-211ENST00000535897 ALDH1A1P00352 501 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 IGKV5-2P06315 115 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 NOM1Q5C9Z4 860 aaKnown RBP10.31□□□□□ -0.76
CHFR-211ENST00000535897 SPRYD7Q5W111 196 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 TXNRD3Q86VQ6 643 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 SLC10A4Q96EP9 437 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 MPHOSPH8Q99549 860 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 ANKRD2Q9GZV1 360 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 FZD1Q9UP38 647 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 LEMD3Q9Y2U8 911 aa10.31□□□□□ -0.76
CHFR-211ENST00000535897 KLRK1P26718 216 aa10.3□□□□□ -0.76
CHFR-211ENST00000535897 MMP14P50281 582 aa10.3□□□□□ -0.76
CHFR-211ENST00000535897 DLGAP5Q15398 846 aa10.3□□□□□ -0.76
CHFR-211ENST00000535897 DEFB129Q9H1M3 183 aa10.3□□□□□ -0.76
CHFR-211ENST00000535897 R3HDMLQ9H3Y0 253 aa10.3□□□□□ -0.76
CHFR-211ENST00000535897 TRIM17Q9Y577 477 aa10.3□□□□□ -0.76
CHFR-211ENST00000535897 COL1A1P02452 1464 aaPredicted RBP10.3□□□□□ -0.76
CHFR-211ENST00000535897 MANSC4A6NHS7 340 aaPredicted RBP10.29□□□□□ -0.76
CHFR-211ENST00000535897 NEURL1BA8MQ27 555 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 F8W031 263 aaPredicted RBP10.29□□□□□ -0.76
CHFR-211ENST00000535897 MYO1BO43795 1136 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
CHFR-211ENST00000535897 ITGA6P23229 1130 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 LDLRAD1Q5T700 205 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 IFNL1Q8IU54 200 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 TSPYL6Q8N831 410 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 GCC1Q96CN9 775 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 CFHR5Q9BXR6 569 aa10.29□□□□□ -0.76
CHFR-211ENST00000535897 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 ZBTB48P10074 688 aaPredicted RBP10.28□□□□□ -0.76
CHFR-211ENST00000535897 INHBEP58166 350 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 TSR2Q969E8 191 aaKnown RBP10.28□□□□□ -0.76
CHFR-211ENST00000535897 CLMNQ96JQ2 1002 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 MYH16Q9H6N6 1097 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 VEZTQ9HBM0 779 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 HTTP42858 3142 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 ECM29Q5VYK3 1845 aa10.28□□□□□ -0.76
CHFR-211ENST00000535897 H7C1W4 665 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 RBM5P52756 815 aaKnown RBP eCLIP10.27□□□□□ -0.77
CHFR-211ENST00000535897 CHRNDQ07001 517 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 SUPT20HL1Q3ZLR7 823 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 INTS3Q68E01 1043 aaKnown RBP10.27□□□□□ -0.77
CHFR-211ENST00000535897 OTUD7BQ6GQQ9 843 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 G2E3Q7L622 706 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 OTOP1Q7RTM1 612 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 ERO1AQ96HE7 468 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 WNK4Q96J92 1243 aa10.27□□□□□ -0.77
CHFR-211ENST00000535897 CD209Q9NNX6 404 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms