RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 RGMBQ6NW40 437 aa26.34■■□□□ 1.81
LTBR-205ENST00000535739 ZNF646O15015 1829 aaPredicted RBP26.34■■□□□ 1.81
LTBR-205ENST00000535739 USP17L8P0C7I0 530 aa26.33■■□□□ 1.81
LTBR-205ENST00000535739 DNAAF4Q8WXU2 420 aa26.33■■□□□ 1.81
LTBR-205ENST00000535739 MYOZ2Q9NPC6 264 aa26.33■■□□□ 1.81
LTBR-205ENST00000535739 FAM155AB1AL88 458 aaPredicted RBP26.32■■□□□ 1.8
LTBR-205ENST00000535739 VAMP4O75379 141 aa26.32■■□□□ 1.8
LTBR-205ENST00000535739 IGHMBP2P38935 993 aaKnown RBP26.32■■□□□ 1.8
LTBR-205ENST00000535739 CASP7P55210 303 aa26.32■■□□□ 1.8
LTBR-205ENST00000535739 CDCA5Q96FF9 252 aa26.32■■□□□ 1.8
LTBR-205ENST00000535739 PLA2G12BQ9BX93 195 aa26.32■■□□□ 1.8
LTBR-205ENST00000535739 ANP32CO43423 234 aa26.31■■□□□ 1.8
LTBR-205ENST00000535739 ITGA6P23229 1130 aa26.31■■□□□ 1.8
LTBR-205ENST00000535739 FAM161AQ3B820 660 aa26.31■■□□□ 1.8
LTBR-205ENST00000535739 WDR63Q8IWG1 891 aa26.31■■□□□ 1.8
LTBR-205ENST00000535739 MXD3Q9BW11 206 aa26.31■■□□□ 1.8
LTBR-205ENST00000535739 MYH16Q9H6N6 1097 aa26.31■■□□□ 1.8
LTBR-205ENST00000535739 ZNF157P51786 506 aaPredicted RBP26.3■■□□□ 1.8
LTBR-205ENST00000535739 EXOSC9Q06265 439 aaKnown RBP26.3■■□□□ 1.8
LTBR-205ENST00000535739 TXNRD3Q86VQ6 643 aa26.3■■□□□ 1.8
LTBR-205ENST00000535739 LINS1Q8NG48 757 aa26.3■■□□□ 1.8
LTBR-205ENST00000535739 FBXW7Q969H0 707 aa26.29■■□□□ 1.8
LTBR-205ENST00000535739 SCAF8Q9UPN6 1271 aaKnown RBP26.29■■□□□ 1.8
LTBR-205ENST00000535739 LEMD3Q9Y2U8 911 aa26.29■■□□□ 1.8
LTBR-205ENST00000535739 AKAP11Q9UKA4 1901 aa26.28■■□□□ 1.8
LTBR-205ENST00000535739 CSF1RP07333 972 aa26.28■■□□□ 1.8
LTBR-205ENST00000535739 DACT2Q5SW24 774 aa26.28■■□□□ 1.8
LTBR-205ENST00000535739 CCDC102AQ96A19 550 aa26.28■■□□□ 1.8
LTBR-205ENST00000535739 MPHOSPH8Q99549 860 aa26.27■■□□□ 1.8
LTBR-205ENST00000535739 COA1Q9GZY4 146 aa26.27■■□□□ 1.8
LTBR-205ENST00000535739 ZNF804BA4D1E1 1349 aa26.26■■□□□ 1.79
LTBR-205ENST00000535739 PITPNM2Q9BZ72 1349 aa26.26■■□□□ 1.79
LTBR-205ENST00000535739 KLRK1P26718 216 aa26.26■■□□□ 1.79
LTBR-205ENST00000535739 KIF23Q02241 960 aaPredicted RBP26.26■■□□□ 1.79
LTBR-205ENST00000535739 ANKRD2Q9GZV1 360 aa26.26■■□□□ 1.79
LTBR-205ENST00000535739 SPINK5Q9NQ38 1064 aaPredicted RBP26.26■■□□□ 1.79
LTBR-205ENST00000535739 ZNF316A6NFI3 1004 aaPredicted RBP26.25■■□□□ 1.79
LTBR-205ENST00000535739 F6X3S4 739 aa26.25■■□□□ 1.79
LTBR-205ENST00000535739 NBPF9Q3BBW0 867 aa26.25■■□□□ 1.79
LTBR-205ENST00000535739 STRIP1Q5VSL9 837 aa26.25■■□□□ 1.79
LTBR-205ENST00000535739 SLC10A3P09131 477 aa26.24■■□□□ 1.79
LTBR-205ENST00000535739 PAPPA2Q9BXP8 1791 aa26.23■■□□□ 1.79
LTBR-205ENST00000535739 CCDC85CA6NKD9 419 aa26.23■■□□□ 1.79
LTBR-205ENST00000535739 CHRNDQ07001 517 aa26.23■■□□□ 1.79
LTBR-205ENST00000535739 OGFOD1Q8N543 542 aa26.23■■□□□ 1.79
LTBR-205ENST00000535739 MYO3BQ8WXR4 1341 aa26.22■■□□□ 1.79
LTBR-205ENST00000535739 ANKRD18BA2A2Z9 1011 aa26.22■■□□□ 1.79
LTBR-205ENST00000535739 PRAMEF18Q5VWM3 479 aa26.22■■□□□ 1.79
LTBR-205ENST00000535739 TTLL5Q6EMB2 1281 aa26.22■■□□□ 1.79
LTBR-205ENST00000535739 MCOLN1Q9GZU1 580 aa26.22■■□□□ 1.79
LTBR-205ENST00000535739 A0A1B0GUL6 1792 aa26.22■■□□□ 1.79
LTBR-205ENST00000535739 KCNJ4P48050 445 aa26.21■■□□□ 1.79
LTBR-205ENST00000535739 FOXO4P98177 505 aa26.21■■□□□ 1.79
LTBR-205ENST00000535739 BEND3Q5T5X7 828 aa26.21■■□□□ 1.79
LTBR-205ENST00000535739 MOB2Q70IA6 237 aa26.21■■□□□ 1.79
LTBR-205ENST00000535739 SNAP23O00161 211 aa26.2■■□□□ 1.78
LTBR-205ENST00000535739 WNT10BO00744 389 aa26.2■■□□□ 1.78
LTBR-205ENST00000535739 TAF5LO75529 589 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 SASH1O94885 1247 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 FKBP1BP68106 108 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 GTF2IP78347 998 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 RASAL3Q86YV0 1011 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 FAM9BQ8IZU0 186 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 HELBQ8NG08 1087 aaPredicted RBP26.19■■□□□ 1.78
LTBR-205ENST00000535739 CSRNP1Q96S65 589 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 RNF186Q9NXI6 227 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 SAGE1Q9NXZ1 904 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 CHMP3Q9Y3E7 222 aa26.19■■□□□ 1.78
LTBR-205ENST00000535739 TRPA1O75762 1119 aa26.18■■□□□ 1.78
LTBR-205ENST00000535739 IFIT5Q13325 482 aaKnown RBP26.18■■□□□ 1.78
LTBR-205ENST00000535739 DGKZQ13574 1117 aa26.18■■□□□ 1.78
LTBR-205ENST00000535739 KIAA0825Q8IV33 1275 aa26.18■■□□□ 1.78
LTBR-205ENST00000535739 CD209Q9NNX6 404 aa26.17■■□□□ 1.78
LTBR-205ENST00000535739 UBE2Q2LH0YL09 131 aa26.16■■□□□ 1.78
LTBR-205ENST00000535739 EPHA10Q5JZY3 1008 aa26.16■■□□□ 1.78
LTBR-205ENST00000535739 LMBR1LQ6UX01 489 aa26.16■■□□□ 1.78
LTBR-205ENST00000535739 IRS2Q9Y4H2 1338 aa26.15■■□□□ 1.78
LTBR-205ENST00000535739 MMP14P50281 582 aa26.15■■□□□ 1.78
LTBR-205ENST00000535739 HDAC9Q9UKV0 1011 aa26.15■■□□□ 1.78
LTBR-205ENST00000535739 GRM8O00222 908 aa26.14■■□□□ 1.78
LTBR-205ENST00000535739 TTLL12Q14166 644 aaPredicted RBP26.14■■□□□ 1.78
LTBR-205ENST00000535739 ZNF594Q96JF6 807 aaPredicted RBP26.14■■□□□ 1.78
LTBR-205ENST00000535739 C15orf52Q6ZUT6 534 aaKnown RBP26.13■■□□□ 1.77
LTBR-205ENST00000535739 SLC4A10Q6U841 1118 aa26.12■■□□□ 1.77
LTBR-205ENST00000535739 CERS5Q8N5B7 392 aa26.12■■□□□ 1.77
LTBR-205ENST00000535739 ZBED3Q96IU2 234 aaPredicted RBP26.12■■□□□ 1.77
LTBR-205ENST00000535739 CCDC57Q2TAC2 916 aa26.11■■□□□ 1.77
LTBR-205ENST00000535739 REM2Q8IYK8 340 aaPredicted RBP26.11■■□□□ 1.77
LTBR-205ENST00000535739 C9orf78Q9NZ63 289 aaPredicted RBP26.11■■□□□ 1.77
LTBR-205ENST00000535739 ECM29Q5VYK3 1845 aa26.1■■□□□ 1.77
LTBR-205ENST00000535739 PLIN1O60240 522 aa26.1■■□□□ 1.77
LTBR-205ENST00000535739 NF2P35240 595 aa26.1■■□□□ 1.77
LTBR-205ENST00000535739 TAF7LQ5H9L4 462 aa26.1■■□□□ 1.77
LTBR-205ENST00000535739 LDHAL6AQ6ZMR3 332 aa26.1■■□□□ 1.77
LTBR-205ENST00000535739 APOBEC3FQ8IUX4 373 aaKnown RBP26.1■■□□□ 1.77
LTBR-205ENST00000535739 ZNF804AQ7Z570 1209 aa26.09■■□□□ 1.77
LTBR-205ENST00000535739 ALDH1L1O75891 902 aa26.08■■□□□ 1.77
LTBR-205ENST00000535739 IL1R1P14778 569 aa26.08■■□□□ 1.77
LTBR-205ENST00000535739 RGS19P49795 217 aa26.08■■□□□ 1.77
LTBR-205ENST00000535739 PRKG1Q13976 671 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms