RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ALDH1L1O75891 902 aa13.73□□□□□ -0.21
CCDC60-202ENST00000535685 IFFO2Q5TF58 517 aa13.73□□□□□ -0.21
CCDC60-202ENST00000535685 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
CCDC60-202ENST00000535685 CCDC85AQ96PX6 553 aaPredicted RBP13.73□□□□□ -0.21
CCDC60-202ENST00000535685 ZNF646O15015 1829 aaPredicted RBP13.73□□□□□ -0.21
CCDC60-202ENST00000535685 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 E9PSI1 815 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 IGHMBP2P38935 993 aaKnown RBP13.72□□□□□ -0.21
CCDC60-202ENST00000535685 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 TRPM4Q8TD43 1214 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 KCNQ5Q9NR82 932 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
CCDC60-202ENST00000535685 LEMD3Q9Y2U8 911 aa13.72□□□□□ -0.21
CCDC60-202ENST00000535685 A0A1B0GUL6 1792 aa13.71□□□□□ -0.21
CCDC60-202ENST00000535685 F6X3S4 739 aa13.71□□□□□ -0.21
CCDC60-202ENST00000535685 ITGA6P23229 1130 aa13.71□□□□□ -0.21
CCDC60-202ENST00000535685 CCT4P50991 539 aaKnown RBP13.71□□□□□ -0.21
CCDC60-202ENST00000535685 DEFB115Q30KQ5 88 aa13.71□□□□□ -0.21
CCDC60-202ENST00000535685 CST9Q5W186 159 aa13.71□□□□□ -0.21
CCDC60-202ENST00000535685 CDC37L1Q7L3B6 337 aa13.71□□□□□ -0.21
CCDC60-202ENST00000535685 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
CCDC60-202ENST00000535685 GPR101Q96P66 508 aaPredicted RBP13.71□□□□□ -0.21
CCDC60-202ENST00000535685 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
CCDC60-202ENST00000535685 GRM8O00222 908 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 HSPA1AP0DMV8 641 aaKnown RBP13.7□□□□□ -0.22
CCDC60-202ENST00000535685 HSPA1BP0DMV9 641 aaKnown RBP13.7□□□□□ -0.22
CCDC60-202ENST00000535685 VEGFBP49765 207 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 MMP14P50281 582 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 ZNF280AP59817 542 aaPredicted RBP13.7□□□□□ -0.22
CCDC60-202ENST00000535685 FOXO4P98177 505 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 SLFN5Q08AF3 891 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 HHIPL1Q96JK4 782 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 GMLQ99445 158 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 RYDENQ9NUL5 291 aaKnown RBP13.7□□□□□ -0.22
CCDC60-202ENST00000535685 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
CCDC60-202ENST00000535685 SHTN1A0MZ66 631 aa13.69□□□□□ -0.22
CCDC60-202ENST00000535685 G3V3G9 751 aa13.69□□□□□ -0.22
CCDC60-202ENST00000535685 TRAF5O00463 557 aa13.69□□□□□ -0.22
CCDC60-202ENST00000535685 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
CCDC60-202ENST00000535685 C15orf52Q6ZUT6 534 aaKnown RBP13.69□□□□□ -0.22
CCDC60-202ENST00000535685 TRMT2AQ8IZ69 625 aaKnown RBP13.69□□□□□ -0.22
CCDC60-202ENST00000535685 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
CCDC60-202ENST00000535685 TLL2Q9Y6L7 1015 aa13.69□□□□□ -0.22
CCDC60-202ENST00000535685 UTYO14607 1347 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 PTPRCP08575 1304 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 ANKRD18BA2A2Z9 1011 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 USP17L3A6NCW0 530 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 USP17L4A6NCW7 530 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 FXR2P51116 673 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC60-202ENST00000535685 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC60-202ENST00000535685 USP17L1Q7RTZ2 530 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 SAMD7Q7Z3H4 446 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
CCDC60-202ENST00000535685 GLIS2Q9BZE0 524 aaPredicted RBP13.68□□□□□ -0.22
CCDC60-202ENST00000535685 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 COA1Q9GZY4 146 aa13.68□□□□□ -0.22
CCDC60-202ENST00000535685 ZNF804BA4D1E1 1349 aa13.67□□□□□ -0.22
CCDC60-202ENST00000535685 ECE1P42892 770 aa13.67□□□□□ -0.22
CCDC60-202ENST00000535685 IFIT5Q13325 482 aaKnown RBP13.67□□□□□ -0.22
CCDC60-202ENST00000535685 WBP1LQ9NX94 342 aa13.67□□□□□ -0.22
CCDC60-202ENST00000535685 ABT1Q9ULW3 272 aaKnown RBP13.67□□□□□ -0.22
CCDC60-202ENST00000535685 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
CCDC60-202ENST00000535685 IRS2Q9Y4H2 1338 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 WTIPA6NIX2 430 aaPredicted RBP13.66□□□□□ -0.22
CCDC60-202ENST00000535685 CELF2O95319 508 aaKnown RBP13.66□□□□□ -0.22
CCDC60-202ENST00000535685 EGFRP00533 1210 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 CT47B1P0C2W7 299 aaPredicted RBP13.66□□□□□ -0.22
CCDC60-202ENST00000535685 CHRNDQ07001 517 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 TBC1D10BQ4KMP7 808 aaPredicted RBP13.66□□□□□ -0.22
CCDC60-202ENST00000535685 EPHA10Q5JZY3 1008 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 STRIP1Q5VSL9 837 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 SAPCD2Q86UD0 394 aa13.66□□□□□ -0.22
CCDC60-202ENST00000535685 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
CCDC60-202ENST00000535685 MYO3BQ8WXR4 1341 aa13.65□□□□□ -0.22
CCDC60-202ENST00000535685 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
CCDC60-202ENST00000535685 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
CCDC60-202ENST00000535685 DACT2Q5SW24 774 aa13.65□□□□□ -0.22
CCDC60-202ENST00000535685 COL13A1Q5TAT6 717 aaPredicted RBP13.65□□□□□ -0.22
CCDC60-202ENST00000535685 LMBR1LQ6UX01 489 aa13.65□□□□□ -0.22
CCDC60-202ENST00000535685 TXNRD3Q86VQ6 643 aa13.65□□□□□ -0.22
CCDC60-202ENST00000535685 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.22
CCDC60-202ENST00000535685 PITPNM2Q9BZ72 1349 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 MAP2K2P36507 400 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 MAP2K1Q02750 393 aaPredicted RBP13.64□□□□□ -0.23
CCDC60-202ENST00000535685 PDAP1Q13442 181 aaKnown RBP13.64□□□□□ -0.23
CCDC60-202ENST00000535685 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 KRT26Q7Z3Y9 468 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 USP48Q86UV5 1035 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 DCPSQ96C86 337 aaKnown RBP13.64□□□□□ -0.23
CCDC60-202ENST00000535685 KAZALD1Q96I82 304 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 CAPNS2Q96L46 248 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 PRDM10Q9NQV6 1147 aa13.64□□□□□ -0.23
CCDC60-202ENST00000535685 RABL6Q3YEC7 729 aaPredicted RBP13.63□□□□□ -0.23
CCDC60-202ENST00000535685 SLC4A10Q6U841 1118 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms