RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CETN1Q12798 172 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 UTP14AQ9BVJ6 771 aaKnown RBP14.37□□□□□ -0.11
SPG11-203ENST00000535302 ACTN2P35609 894 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 NAA25Q14CX7 972 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 MCMDC2Q4G0Z9 681 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 HSPA2P54652 639 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 UBASH3AP57075 661 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 AOPEPQ8N6M6 819 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 PAG1Q9NWQ8 432 aa14.37□□□□□ -0.11
SPG11-203ENST00000535302 TPD52P55327 224 aaPredicted RBP14.36□□□□□ -0.11
SPG11-203ENST00000535302 STX17P56962 302 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 ESYT1Q9BSJ8 1104 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 DNAJC25Q9H1X3 360 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 MNAT1P51948 309 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 MCM7P33993 719 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 UBE2HP62256 183 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 PLCB3Q01970 1234 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 MICALCLQ6ZW33 695 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 CCDC24Q8N4L8 307 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 PDIA4P13667 645 aaKnown RBP14.36□□□□□ -0.11
SPG11-203ENST00000535302 CPA1P15085 419 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 UAP1Q16222 522 aaPredicted RBP14.36□□□□□ -0.11
SPG11-203ENST00000535302 SMARCC2Q8TAQ2 1214 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 KRT23Q9C075 422 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 NSFL1CQ9UNZ2 370 aaKnown RBP14.36□□□□□ -0.11
SPG11-203ENST00000535302 CCDC65Q8IXS2 484 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 CEP112Q8N8E3 955 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 TFCP2L1Q9NZI6 479 aa14.36□□□□□ -0.11
SPG11-203ENST00000535302 DDB1Q16531 1140 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 TCHPQ9BT92 498 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 DENND4BO75064 1496 aaPredicted RBP14.35□□□□□ -0.11
SPG11-203ENST00000535302 IQCGQ9H095 443 aaKnown RBP14.35□□□□□ -0.11
SPG11-203ENST00000535302 MSH6P52701 1360 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 HARSP12081 509 aaKnown RBP14.35□□□□□ -0.11
SPG11-203ENST00000535302 ASIC1P78348 528 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 TBC1D5Q92609 795 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 MCM9Q9NXL9 1143 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 HMG20BQ9P0W2 317 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 ESR2Q92731 530 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 NAA15Q9BXJ9 866 aaKnown RBP14.35□□□□□ -0.11
SPG11-203ENST00000535302 TNRQ92752 1358 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 PPP2R5DQ14738 602 aa14.35□□□□□ -0.11
SPG11-203ENST00000535302 FAM114A1Q8IWE2 563 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 ZBTB16Q05516 673 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 RASA3Q14644 834 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 ATRIPQ8WXE1 791 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 TNNI2P48788 182 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 EIF6P56537 245 aaKnown RBP14.34□□□□□ -0.11
SPG11-203ENST00000535302 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
SPG11-203ENST00000535302 CCDC129Q6ZRS4 1044 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 AKR1B10O60218 316 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 LRSAM1Q6UWE0 723 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 CLSTN2Q9H4D0 955 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 TTC36A6NLP5 189 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 IRS4O14654 1257 aaPredicted RBP14.34□□□□□ -0.11
SPG11-203ENST00000535302 C6orf163Q5TEZ5 329 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 GRIN2AQ12879 1464 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
SPG11-203ENST00000535302 RNASE9P60153 205 aaKnown RBP14.33□□□□□ -0.11
SPG11-203ENST00000535302 KIF2AO00139 706 aaPredicted RBP14.33□□□□□ -0.12
SPG11-203ENST00000535302 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 CADPS2Q86UW7 1296 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 IFT81Q8WYA0 676 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
SPG11-203ENST00000535302 DACT1Q9NYF0 836 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 KIF4AO95239 1232 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 ZNF804AQ7Z570 1209 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 ODF2LQ9ULJ1 636 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 AKAP4Q5JQC9 854 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 SPECC1LQ69YQ0 1117 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 DHX29Q7Z478 1369 aaKnown RBP14.33□□□□□ -0.12
SPG11-203ENST00000535302 KCNK9Q9NPC2 374 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 MCM3P25205 808 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 STXBP4Q6ZWJ1 553 aa14.33□□□□□ -0.12
SPG11-203ENST00000535302 NAP1L3Q99457 506 aaPredicted RBP14.33□□□□□ -0.12
SPG11-203ENST00000535302 ATP8B2P98198 1209 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
SPG11-203ENST00000535302 HDAC9Q9UKV0 1011 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 ZEB2O60315 1214 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 OGFOD1Q8N543 542 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 CCDC155Q8N6L0 562 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 CCDC114Q96M63 670 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 RRP9O43818 475 aaKnown RBP14.32□□□□□ -0.12
SPG11-203ENST00000535302 GSDMDP57764 484 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 TLDC2A0PJX2 215 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 DAAM2Q86T65 1068 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 SPAG5Q96R06 1193 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 ERCC3P19447 782 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 TAF12Q16514 161 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 MAP7D1Q3KQU3 841 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 KLHDC4Q8TBB5 520 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 FERMT1Q9BQL6 677 aa14.32□□□□□ -0.12
SPG11-203ENST00000535302 BIN2Q9UBW5 565 aaPredicted RBP14.32□□□□□ -0.12
SPG11-203ENST00000535302 CEP57Q86XR8 500 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 RLBP1P12271 317 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms